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JBC, Vol. 254, Issue 24, 12521-12530, Dec, 1979
B. C. Furie, M. Blumenstein and B. Furie
The metal binding sites of a gamma-carboxyglutamic acid-rich fragment
derived from bovine prothrombin were examined using paramagnetic lanthanide
ions to evaluate the role of gamma-carboxyglutamic acid resideus in metal
binding. A gamma-carboxyglutamic acid-rich peptide, fragment 12-44, was
isolated from a tryptic digest of prothrombin. Using 153Gd(III), fragment
12-44 was found to contain one high affinity metal binding site (KD = 0.55
microM) and four to six lower affinity metal binding sites (KD
approximately 4 to 8 microM). The S-carboxymethyl derivative of fragment
12-44, in which the disulfide bond in fragment 12-44 was reduced and
alkylated, contained no high affinity metal binding site and four or five
lower affinity sites (KD = 8 microM). The effects of paramagnetic
lanthanide ions on fragment 12-44 and its S-carboxymethyl derivative were
studied by natural abundance 13C NMR spectroscopy. The 13C NMR spectrum of
fragment 12-44 was recorded at 67.88 MHz and the resonances were assigned
by comparison to the chemical shift of carbon resonances of amino acids and
peptides previously studied. The proximity between bound metal ions and
carbon atoms in fragment 12-44 was estimated using Gd(III), based upon the
strategy that the magnitude of the change in the transverse relaxation rate
of resonances of carbon nuclei induced by bound metal ions is related in
part to the interatomic distances between bound metal and carbon nuclei.
Titration of fragment 12-44 with Gd(III) resulted in the selective
broadening of the gamma-carboxyl carbon, C gamma, C beta, and C alpha
resonances of gamma-carboxyglutamic acid, and the C epsilon of the
arginines. S-Carboxymethyl fragment 12-44, which lacked the high affinity
metal binding site, showed markedly decreased perturbation of the C epsilon
of the arginine residues upon titration with Gd(III). These studies
indicate that gamma-carboxyglutamic acid residues in prothrombin fragment
12-44 participate in metal liganding. A high affinity metal binding site in
fragment 12-44 is in close proximity of Arg 16 and Arg 25 and is stabilized
by the disulfide bond. On the basis of these data, a model of the metal
binding sites is proposed in which the high affinity site is composed of
two gamma-carboxyglutamic acid residues which participate in intramolecular
metal-dependent bridging of two regions of the polypeptide chain. The lower
affinity metal binding sites, formed by single or paired adjacent
gamma-carboxyglutamic acid residues, then may participate in intermolecular
metal-dependent protein . protein or protein . membrane complex formation.
Metal binding sites of a gamma-carboxyglutamic acid-rich fragment of bovine prothrombin
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