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J. Biol. Chem., Vol. 255, Issue 9, 3977-3986, 05, 1980
RR Yocum, JR Rasmussen and JL Strominger
Penicillin kills susceptible bacteria by specifically inhibiting the
transpeptidase that catalyzes the final step in cell wall biosynthesis, the
cross-linking of peptidoglycan. It was hypothesized (Tipper, D., and
Strominger, J. (1965) Proc. Natl. Acad. Sci. U.S.A. 54, 1133-1141) that 1)
penicillin is a structural analog of the acyl-D-alanyl-D- alanine terminus
of the pentapeptide side chains of nascent peptidoglycan, and that 2)
penicillin, by virtue of its highly reactive beta-lactam structure,
irreversibly acylates the active site of the cell wall transpeptidase.
Although the cell wall transpeptidase has proven elusive, a closely related
penicillin-sensitive cell wall enzyme, D-alanine carboxypeptidase, has been
purified from membranes of Bacillus stearothermophilus by penicillin
affinity chromatography. By amino acid sequence analysis of 14C-labeled
cyanogen bromide peptides generated and purified from this carboxypeptidase
covalently labeled with either [14C]penicillin G or the substrate,
[14C]diacetyl-L-lysyl-D- alanyl-D-lactate, it was shown that the penicillin
and substrate were both bound as esters to a serine at residue 36.
Therefore, the second hypothesis stated above was proven to be correct for
D-alanine carboxypeptidase. Several new methods were developed in the
course of this work, including 1) a rapid penicillin-binding assay, 2) use
of hydroxylamine to protect peptides against carbamylation during ion
exchange chromatography in concentrated urea solutions, and 3) gel
filtration chromatography in 70% formic acid, a universal solvent for
peptides.
The mechanism of action of penicillin. Penicillin acylates the active site of Bacillus stearothermophilus D-alanine carboxypeptidase
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