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J. Biol. Chem., Vol. 265, Issue 12, 6626-6632, Apr, 1990
L-lactate 2-monooxygenase from Mycobacterium smegmatis. Cloning, nucleotide sequence, and primary structure homology within an enzyme family
DA Giegel, CH Williams Jr and V Massey
Department of Biological Chemistry, University of Michigan, Ann Arbor.
L-Lactate 2-monooxygenase catalyzes the oxidation of L-lactate to acetate
and carbon dioxide. The catalytic mechanism has been extensively
investigated but very little is known about which amino acid residues may
play a role in catalysis. As a first step toward this goal, the gene for
this protein from Mycobacterium smegmatis has been cloned and sequenced.
Peptide sequencing data for L-lactate 2- monooxygenase was used to
construct three sets of fully redundant tetradecamer oligonucleotide
probes, which were hybridized to restriction-digested M. smegmatis DNA. An
approximately 3-kilobase pair PstI fragment hybridized with two of the
probes. This region was subsequently isolated and cloned into Escherichia
coli. From this size- fractionated gene bank, a 3.1-kilobase pair genomic
DNA fragment was isolated by colony hybridization to two of the
oligonucleotide probes. The complete gene for L-lactate 2-monooxygenase was
contained on this fragment as shown by DNA sequencing of the whole insert.
The DNA sequence codes for a mature protein that is 393 amino acids in
length with a subunit molecular weight of 43,072 (including the FMN). The
protein sequence shows impressive homology with the primary structures of
two mechanistically related proteins, yeast flavocytochrome b2 (Lederer,
F., Cortial, S., Becam, A.-M., Haumont, P.-Y., and Perez, L. (1985) Eur. J.
Biochem. 152, 419-428; Guiard, B. (1985) EMBO J. 4, 3265- 3272) and spinach
glycolate oxidase (Volkita, M., and Somerville, C. R. (1987) J. Biol. Chem.
262, 15825-15828; Cederlund, E., Lindqvist, Y., Soderlund, G., Branden,
C.-I., and Jornvall, H. (1988) Eur. J. Biochem. 173, 523-530). For each
residue proposed from the crystal structure of glycolate oxidase to be
involved in catalysis (Lindqvist, Y., and Branden, C.-I. (1989) J. Biol.
Chem. 264, 3624-3628), an identical residue was found in a homologous
position in lactate oxidase. Furthermore, most of these residues occur in
regions whose sequences are highly conserved between lactate oxidase,
flavocytochrome b2, and glycolate oxidase.

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Copyright © 1990 by the American Society for Biochemistry and Molecular Biology.
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