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J. Biol. Chem., Vol. 266, Issue 22, 14328-14337, Aug, 1991
BE Funnell
The P1 ParB protein is required for active partition and thus stable
inheritance of the plasmid prophage. ParB and the Escherichia coli protein
integration host factor (IHF) participate in the assembly of a partition
complex at the centromere-like site parS. In this report the role of IHF in
the formation of the partition complex has been explored. First, ParB
protein was purified for these studies, which revealed that ParB forms a
dimer in solution. Next, the IHF binding site was mapped to a 29-base pair
region within parS, including the sequence TAACTGACTGTTT (which differs
from the IHF consensus in two positions). IHF induced a strong bend in the
DNA at its binding site. Versions of parS which have lost or damaged the
IHF binding site bound ParB with greatly reduced affinity in vitro and in
vivo. Measurements of binding constants showed that IHF increased ParB
affinity for the wild-type parS site by about 10,000-fold. Finally, DNA
supercoiling improved ParB binding in the presence of IHF but not in its
absence. These observations led to the proposal that IHF and superhelicity
assist ParB by promoting its precise positioning at parS, a spatial
arrangement that results in a high affinity of ParB for parS.
The P1 plasmid partition complex at parS. The influence of Escherichia coli integration host factor and of substrate topology
Laboratory of Biochemistry, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892.
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