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(Received for publication, March 7, 1995; and in revised form, June 13, 1995)
We have recently identified a small region (amino acids
405-419) within the ligand binding domain of a truncated human
retinoic acid receptor
(
419) that is required for binding of
9-cis-retinoic acid (RA), but not all-trans-retinoic
acid (t-RA). To probe the structural determinants of this high
affinity 9-cis-RA binding site, a series of
419 mutants
were prepared whereby an individual alanine residue was substituted for
each amino acid within this region. These modified receptors were
expressed in mammalian COS-1 cells and assayed for their ability to
bind 9-cis-RA as well as t-RA. Only two of the
mutants, M406A (mutation of methionine 406 to alanine), and I410A
(mutation of isoleucine 410 to alanine) exhibit no detectable binding
of 9-cis-RA when analyzed using saturation binding kinetics.
Substitution of methionine 406 with the amino acids leucine,
isoleucine, and valine yields mutant receptors that exhibit decreased
binding for 9-cis-RA as the length or hydrophobicity of the R
group decreases. Further substitution of methionine 406 with the small
polar amino acid, threonine, results in a loss of detectable
9-cis-RA binding. Since amino acids 405-419 on a human
RAR
(hRAR
) are predicted to form a short amphipathic
-helix, modeling of this structure into a helical wheel indicates
that these two amino acids, methionine 406 and isoleucine 410, are
actually positioned proximal to each other. Data presented here suggest
that high affinity 9-cis-RA binding to a hRAR
depends on
an interaction with the two amino acids methionine 406 and isoleucine
410.
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