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Volume 271,
Number 10,
Issue of March 8, 1996 pp. 5698-5703
©1996 by The American Society for Biochemistry and Molecular Biology, Inc.
Intramolecular
G-quartet Motifs Confer Nuclease Resistance to a Potent Anti-HIV
Oligonucleotide
(Received for publication, October 6, 1995; and in revised form, December 23, 1995)
Jeffrey S.
Bishop,
Judith
K.
Guy-Caffey,
Joshua O.
Ojwang,
Sean
R.
Smith
,
Michael E.
Hogan
,
Paul A.
Cossum,
Robert F.
Rando ,
Nilabh
Chaudhary
We have identified a potentially therapeutic anti-human
immunodeficiency virus (HIV)-1 oligonucleotide composed entirely of
deoxyguanosines and thymidines (T30177, also known as AR177:
5`-g*tggtgggtgggtggg*t-3`, where asterisk indicates phosphorothioate
linkage). In acute assay systems using human T-cells, T30177 and its
total phosphodiester homologue T30175 inhibited HIV-1-induced syncytium
production by 50% at 0.15 and 0.3 µM, respectively. Under
physiological conditions, the sequence and composition of the 17-mer
favors the formation of a compact, intramolecularly folded structure
dominated by two stacked guanine quartet motifs that are connected by
three loops of TGs. The molecule is stabilized by the coordination of a
potassium ion between the two stacked quartets. We now show that these
guanine quartet-containing oligonucleotides are highly resistant to
serum nucleases, with t of 5 h and >4 days for
T30175 and T30177, respectively. Both oligonucleotides were
internalized efficiently by cells, with intracellular concentrations
reaching 5-10-fold above the extracellular levels after 24 h of
incubation. In contrast, single-base mutated variants or random
sequence control oligonucleotides that could not form the compactly
folded structure had markedly reduced half-lives (t from 3 to 7 min), low cellular uptake, and no
sequence-specific anti-HIV-1 activity. These data suggest that the
tertiary structure of an oligonucleotide is a key determinant of its
nuclease resistance, cellular uptake kinetics, and biological efficacy.

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Copyright © 1996 by the American Society for Biochemistry and Molecular Biology.
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