JBC Focus on PI3-Kinase with Echelon

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Volume 271, Number 44, Issue of November 1, 1996 pp. 27730-27738
©1996 by The American Society for Biochemistry and Molecular Biology, Inc.

ATP-dependent Degradation of CcdA by Lon Protease
EFFECTS OF SECONDARY STRUCTURE AND HETEROLOGOUS SUBUNIT INTERACTIONS

(Received for publication, July 10, 1996)

Laurence Van Melderen Dagger , Minh Hoa Dao Thi § , Paolo Lecchi , Susan Gottesman par , Martine Couturier Dagger and Michael R. Maurizi ''

From the Dagger  Laboratoire de Genetique, Departement de Biologie Moleculaire, Universite Libre de Bruxelles, rue des Chevaux, 67, B-1640 Rhode Saint Genese, Belgium, the Laboratories of '' Cell Biology and par  Molecular Biology, National Cancer Institute, Bethesda, Maryland 20892, § Dienst Ultrastruktuur, Institut Moleculaire Biologie, Vrije Universiteit Brussel, Paardenstraat 65, B-1640 Rhode Saint Genese, Belgium, and the  Laboratory of Analytical Chemistry, NIDDK, National Institutes of Health, Bethesda, Maryland 20892

CcdA, the antidote protein of the ccd post-segregational killing system carried by the F plasmid, was degraded in vitro by purified Lon protease from Escherichia coli. CcdA had a low affinity for Lon (Km >= 200 µM), and the peptide bond turnover number was ~10 min-1. CcdA formed tight complexes with purified CcdB, the killer protein encoded in the ccd operon, and fluorescence and hydrodynamic measurements suggested that interaction with CcdB converted CcdA to a more compact conformation. CcdB prevented CcdA degradation by Lon and blocked the ability of CcdA to activate the ATPase activity of Lon, suggesting that Lon may recognize bonding domains of proteins exposed when their partners are absent. Degradation of CcdA required ATP hydrolysis; however, CcdA41, consisting of the carboxyl-terminal 41 amino acids of CcdA and lacking the alpha -helical secondary structure present in CcdA, was degraded without ATP hydrolysis. Lon cleaved CcdA primarily between aliphatic and hydrophilic residues, and CcdA41 was cleaved at the same peptide bonds, indicating that ATP hydrolysis does not affect cleavage specificity. CcdA lost alpha -helical structure at elevated temperatures (Tm ~50 °C), and its degradation became independent of ATP hydrolysis at this temperature. ATP hydrolysis may be needed to disrupt interactions that stabilize the secondary structure of proteins allowing the disordered protein greater access to the proteolytic active sites.


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