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(Received for publication, April 21, 1997, and in revised form, May 2, 1997)
From the Medical Biology Institute, La Jolla, California
92037
Site-specific variants of rat intestinal fatty
acid-binding protein were constructed to identify the molecular
interactions that are important for binding to fatty acids (FAs).
Several variants displayed affinities that appeared incompatible with
the crystal structure of the protein-FA complex. Thermodynamic
measurements provided an explanation for these apparent inconsistencies
and revealed that binding affinities often inaccurately reported
changes in protein-FA interactions because changes in the binding
entropy and enthalpy were usually compensatory. These results
demonstrate that understanding the effects of amino acid replacements
on ligand binding requires measurements of enthalpy and entropy, in
addition to affinity.
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