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Volume 272, Number 34, Issue of August 22, 1997 pp. 21558-21564
©1997 by The American Society for Biochemistry and Molecular Biology, Inc.

Purification, Characterization, and Reconstitution of DNA-dependent RNA Polymerases from Caulobacter crescentus

(Received for publication, March 17, 1997, and in revised form, June 4, 1997)

Jianguo Wu , Noriko Ohta , Andrew K. Benson , Alexander J. Ninfa and Austin Newton

From the Department of Molecular Biology, Princeton University, Princeton, New Jersey 08544

Cell differentiation in the Caulobacter crescentus cell cycle requires differential gene expression that is regulated primarily at the transcriptional level. Until now, however, a defined in vitro transcription system for the biochemical study of developmentally regulated transcription factors had not been available in this bacterium. We report here the purification of C. crescentus RNA polymerase holoenzymes and resolution of the core RNA polymerase from holoenzymes by chromatography on single-stranded DNA cellulose. The three RNA polymerase holoenzymes Esigma 54, Esigma 32, and Esigma 73 were reconstituted exclusively from purified C. crescentus core and sigma factors. Reconstituted Esigma 54 initiated transcription from the sigma 54-dependent fljK promoter of C. crescentus in the presence of the transcription activator FlbD, and active Esigma 32 specifically initiated transcription from the sigma 32-dependent promoter of the C. crescentus heat-shock gene dnaK. For reconstitution of the Esigma 73 holoenzyme, we overexpressed the C. crescentus rpoD gene in Escherichia coli and purified the full-length sigma 73 protein. The reconstituted Esigma 73 recognized the sigma 70-dependent promoters of the E. coli lacUV5 and neo genes, as well as the sigma 73-dependent housekeeping promoters of the C. crescentus pleC and rsaA genes. The ability of the C. crescentus Esigma 73 RNA polymerase to recognize E. coli sigma 70-dependent promoters is consistent with relaxed promoter specificity of this holoenzyme previously observed in vivo.


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