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Volume 272, Number 8, Issue of February 21, 1997 pp. 4795-4803
©1997 by The American Society for Biochemistry and Molecular Biology, Inc.

VMA11 and VMA16 Encode Second and Third Proteolipid Subunits of the Saccharomyces cerevisiae Vacuolar Membrane H+-ATPase

(Received for publication, July 23, 1996, and in revised form, November 5, 1996)

Ryogo Hirata Dagger , Laurie A. Graham § , Akira Takatsuki Dagger , Tom H. Stevens § and Yasuhiro Anraku

From the Dagger  Institute of Physical and Chemical Research (RIKEN), Hirosawa, Wako-shi, Saitama 351-01, Japan, the § Institute of Molecular Biology, University of Oregon, Eugene, Oregon 97403-1229, and the  Department of Biological Sciences, Graduate School of Science, University of Tokyo, Hongo, Bunkyo-ku, Tokyo 113, Japan

The vacuolar membrane H+-ATPase (V-ATPase) of the yeast Saccharomyces cerevisiae is composed of peripheral catalytic (V1) and integral membrane (V0) domains. The 17-kDa proteolipid subunit (VMA3 gene product; Vma3p) is predicted to constitute at least part of the proton translocating pore of V0. Recently, two VMA3 homologues, VMA11 and VMA16 (PPA1), have been identified in yeast, and VMA11 has been shown to be required for the V-ATPase activity. Cells disrupted for the VMA16 gene displayed the same phenotypes as those lacking either Vma3p or Vma11p; the mutant cells lost V-ATPase activity and failed to assemble V-ATPase subunits onto the vacuolar membrane. Epitope-tagged Vma11p and Vma16p were detected on the vacuolar membrane by immunofluorescence microscopy. Density gradient fractionation of the solubilized vacuolar proteins demonstrated that the tagged proteins copurified with the V-ATPase complex. We conclude that Vma11p and Vma16p are essential subunits of the V-ATPase. Vma3p contains a conserved glutamic acid residue (Glu137) whose carboxyl side chain is predicted to be important for proton transport activity. Mutational analysis of Vma11p and Vma16p revealed that both proteins contain a glutamic acid residue (Vma11p Glu145 and Vma16p Glu108) functionally similar to Vma3p Glu137. These residues could only be functionally substituted by an aspartic acid residue, because other mutations we examined inactivated the enzyme activity. Assembly and vacuolar targeting of the enzyme complex was not inhibited by these mutations. These results suggest that the three proteolipid subunits have similar but not redundant functions, each of which is most likely involved in proton transport activity of the enzyme complex. Yeast cells contain V0 and V1 subcomplexes in the vacuolar membrane and in the cytosol, respectively, that can be assembled into the active V0V1 complex in vivo. Surprisingly, loss-of-function mutations of either Vma11p Glu145 or Vma16p Glu108 resulted in a higher degree of assembly of the V1 subunits onto the V0 subcomplex in the vacuolar membrane.


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T. Oka, R. Yamamoto, and M. Futai
Three vha Genes Encode Proteolipids of Caenorhabditis elegans Vacuolar-type ATPase. GENE STRUCTURES AND PREFERENTIAL EXPRESSION IN AN H-SHAPED EXCRETORY CELL AND RECTAL CELLS
J. Biol. Chem., September 26, 1997; 272(39): 24387 - 24392.
[Abstract] [Full Text] [PDF]


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J. Biol. Chem.Home page
J. J. Tomashek, B. S. Garrison, and D. J. Klionsky
Reconstitution in Vitro of the V1 Complex from the Yeast Vacuolar Proton-translocating ATPase. ASSEMBLY RECAPITULATES MECHANISM
J. Biol. Chem., June 27, 1997; 272(26): 16618 - 16623.
[Abstract] [Full Text] [PDF]


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J. Biol. Chem.Home page
C. Landolt-Marticorena, K. M. Williams, J. Correa, W. Chen, and M. F. Manolson
Evidence That the NH2 Terminus of Vph1p, an Integral Subunit of the V0 Sector of the Yeast V-ATPase, Interacts Directly with the Vma1p and Vma13p Subunits of the V1 Sector
J. Biol. Chem., May 12, 2000; 275(20): 15449 - 15457.
[Abstract] [Full Text] [PDF]


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J. Biol. Chem.Home page
B. Powell, L. A. Graham, and T. H. Stevens
Molecular Characterization of the Yeast Vacuolar H+-ATPase Proton Pore
J. Biol. Chem., July 28, 2000; 275(31): 23654 - 23660.
[Abstract] [Full Text] [PDF]


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J. Biol. Chem.Home page
S. Kawasaki-Nishi, T. Nishi, and M. Forgac
Yeast V-ATPase Complexes Containing Different Isoforms of the 100-kDa a-subunit Differ in Coupling Efficiency and in Vivo Dissociation
J. Biol. Chem., May 18, 2001; 276(21): 17941 - 17948.
[Abstract] [Full Text] [PDF]


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J. Biol. Chem.Home page
T. Nishi, S. Kawasaki-Nishi, and M. Forgac
Expression and Localization of the Mouse Homologue of the Yeast V-ATPase 21-kDa Subunit c'' (Vma16p)
J. Biol. Chem., August 31, 2001; 276(36): 34122 - 34130.
[Abstract] [Full Text] [PDF]


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J. Biol. Chem.Home page
K. Keenan Curtis and P. M. Kane
Novel Vacuolar H+-ATPase Complexes Resulting from Overproduction of Vma5p and Vma13p
J. Biol. Chem., January 18, 2002; 277(4): 2716 - 2724.
[Abstract] [Full Text] [PDF]


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J. Biol. Chem.Home page
Y. Arata, J. D. Baleja, and M. Forgac
Cysteine-directed Cross-linking to Subunit B Suggests That Subunit E Forms Part of the Peripheral Stalk of the Vacuolar H+-ATPase
J. Biol. Chem., January 25, 2002; 277(5): 3357 - 3363.
[Abstract] [Full Text] [PDF]


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Proc. Natl. Acad. Sci. USAHome page
S. Kawasaki-Nishi, T. Nishi, and M. Forgac
Arg-735 of the 100-kDa subunit a of the yeast V-ATPase is essential for proton translocation
PNAS, October 23, 2001; 98(22): 12397 - 12402.
[Abstract] [Full Text] [PDF]




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