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J Biol Chem, Vol. 273, Issue 28, 17879-17885, July 10, 1998
From the Departments of Topoisomerase IV is a bacterial type II
topoisomerase that is essential for proper chromosome segregation and
is a target for quinolone-based antimicrobial agents. Despite the
importance of this enzyme to the survival of prokaryotic cells and to
the treatment of bacterial infections, relatively little is known about
the details of its catalytic mechanism or the basis by which quinolones
alter its enzymatic functions. Therefore, a series of experiments that
analyzed individual steps of the topoisomerase IV catalytic cycle were
undertaken to address these critical mechanistic issues. The following
conclusions were drawn. First, equilibrium levels of DNA cleavage
mediated by the bacterial enzyme were considerably (>10-fold) higher
than those observed with its eukaryotic counterparts. To a large
extent, this reflected decreased rates of DNA religation. Second, the
preference of topoisomerase IV for catalyzing DNA decatenation over
relaxation reflects increased rates of strand passage and enzyme
recycling rather than a heightened recognition of intermolecular DNA
helices. Third, quinolones stimulate topoisomerase IV-mediated DNA
cleavage both by increasing rates of DNA scission and by inhibiting
religation of cleaved DNA. Finally, quinolones inhibit the overall
catalytic activity of topoisomerase IV primarily by interfering with
enzyme-ATP interactions.
Topoisomerase IV Catalysis and the Mechanism of Quinolone
Action
,
Biochemistry and
Medicine (Oncology), Vanderbilt University School of Medicine,
Nashville, Tennessee 37232-0146, and the ¶ Department of Cancer,
Immunology, and Infectious Diseases, Pfizer Central Research, Pfizer,
Inc., Groton, Connecticut 06340
Copyright © 1998 by The American Society for Biochemistry and Molecular Biology, Inc.
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