JBC Oz Biosciences

HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
 QUICK SEARCH:   [advanced]


     


This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Right arrow Citation Map
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Kolupaeva, V. G.
Right arrow Articles by Shatsky, I. N.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Kolupaeva, V. G.
Right arrow Articles by Shatsky, I. N.
Social Bookmarking
 Add to CiteULike   Add to Complore   Add to Connotea   Add to Del.icio.us   Add to Digg   Add to Reddit   Add to Technorati  
What's this?

J Biol Chem, Vol. 273, Issue 29, 18599-18604, July 17, 1998

Translation Eukaryotic Initiation Factor 4G Recognizes a Specific Structural Element within the Internal Ribosome Entry Site of Encephalomyocarditis Virus RNA

Victoria G. KolupaevaDagger §, Tatyana V. PestovaDagger §, Christopher U. T. Hellen§, and Ivan N. ShatskyDagger

From the Dagger  A. N. Belozersky Institute of Physico-Chemical Biology, Moscow State University, 119899 Moscow, Russia and § Department of Microbiology and Immunology, Morse Institute for Molecular Genetics, State University of New York Health Science Center at Brooklyn, Brooklyn, New York 11203-2098

A complex of eukaryotic initiation factors (eIFs) 4A, 4E, and 4G (collectively termed eIF4F) plays a key role in recruiting mRNAs to ribosomes during translation initiation. The site of ribosomal entry onto most mRNAs is determined by interaction of the 5'-terminal cap with eIF4E; eIFs 4A and 4G may facilitate ribosomal entry by modifying mRNA structure near the cap and by interacting with ribosome-associated factors. eIF4G recruits uncapped encephalomyocarditis virus (EMCV) mRNA to ribosomes without the involvement of eIF4E by binding directly to the ~450-nucleotide long EMCV internal ribosome entry site (IRES). We have used chemical and enzymatic probing to map the eIF4G binding site to a structural element within the J-K domain of the EMCV IRES that consists of an oligo(A) loop at the junction of three helices. The oligo(A) loop itself is not sufficient to form stable complexes with eIF4G since alteration of its structural context abolished its interaction with eIF4G. Addition of wild type or trans-dominant mutant forms of eIF4A to binary IRES·eIF4G complexes did not further alter the pattern of chemical/enzymatic modification of the IRES.


Copyright © 1998 by The American Society for Biochemistry and Molecular Biology, Inc.
Add to CiteULike CiteULike   Add to Complore Complore   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us   Add to Digg Digg   Add to Reddit Reddit   Add to Technorati Technorati    What's this?


This article has been cited by other articles:


Home page
J. Virol.Home page
J. M. Bonderoff, J. L. LaRey, and R. E. Lloyd
Cleavage of Poly(A)-Binding Protein by Poliovirus 3C Proteinase Inhibits Viral Internal Ribosome Entry Site-Mediated Translation
J. Virol., October 1, 2008; 82(19): 9389 - 9399.
[Abstract] [Full Text] [PDF]


Home page
RNAHome page
J. S. Pfingsten and J. S. Kieft
RNA structure-based ribosome recruitment: Lessons from the Dicistroviridae intergenic region IRESes
RNA, July 1, 2008; 14(7): 1255 - 1263.
[Abstract] [Full Text] [PDF]


Home page
J. Virol.Home page
N. Sarma, D. Agarwal, L. A. Shiflett, and G. S. Read
Small Interfering RNAs That Deplete the Cellular Translation Factor eIF4H Impede mRNA Degradation by the Virion Host Shutoff Protein of Herpes Simplex Virus
J. Virol., July 1, 2008; 82(13): 6600 - 6609.
[Abstract] [Full Text] [PDF]


Home page
RNAHome page
L. Lindqvist, H. Imataka, and J. Pelletier
Cap-dependent eukaryotic initiation factor-mRNA interactions probed by cross-linking
RNA, May 1, 2008; 14(5): 960 - 969.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
D. Lin, T. V. Pestova, C. U. T. Hellen, and H. Tiedge
Translational Control by a Small RNA: Dendritic BC1 RNA Targets the Eukaryotic Initiation Factor 4A Helicase Mechanism
Mol. Cell. Biol., May 1, 2008; 28(9): 3008 - 3019.
[Abstract] [Full Text] [PDF]


Home page
J. Gen. Virol.Home page
E. Martinez-Salas, A. Pacheco, P. Serrano, and N. Fernandez
New insights into internal ribosome entry site elements relevant for viral gene expression
J. Gen. Virol., March 1, 2008; 89(3): 611 - 626.
[Abstract] [Full Text] [PDF]


Home page
J. Virol.Home page
K. K. Orlinger, R. M. Kofler, F. X. Heinz, V. M. Hoenninger, and C. W. Mandl
Selection and Analysis of Mutations in an Encephalomyocarditis Virus Internal Ribosome Entry Site That Improve the Efficiency of a Bicistronic Flavivirus Construct
J. Virol., November 15, 2007; 81(22): 12619 - 12629.
[Abstract] [Full Text] [PDF]


Home page
J. Gen. Virol.Home page
O. Fernandez-Miragall and E. Martinez-Salas
In vivo footprint of a picornavirus internal ribosome entry site reveals differences in accessibility to specific RNA structural elements
J. Gen. Virol., November 1, 2007; 88(11): 3053 - 3062.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
A. J. Hobro, M. Rouhi, E. W. Blanch, and G. L. Conn
Raman and Raman optical activity (ROA) analysis of RNA structural motifs in Domain I of the EMCV IRES
Nucleic Acids Res., February 28, 2007; 35(4): 1169 - 1177.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
C. Junemann, Y. Song, G. Bassili, D. Goergen, J. Henke, and M. Niepmann
Picornavirus Internal Ribosome Entry Site Elements Can Stimulate Translation of Upstream Genes
J. Biol. Chem., January 5, 2007; 282(1): 132 - 141.
[Abstract] [Full Text] [PDF]


Home page
Sci SignalHome page
R. J. Jackson and N. Standart
How Do MicroRNAs Regulate Gene Expression?
Sci. Signal., January 2, 2007; 2007(367): re1 - re1.
[Abstract] [Full Text] [PDF]


Home page
RNAHome page
O. FERNANDEZ-MIRAGALL, R. RAMOS, J. RAMAJO, and E. MARTINEZ-SALAS
Evidence of reciprocal tertiary interactions between conserved motifs involved in organizing RNA structure essential for internal initiation of translation
RNA, February 1, 2006; 12(2): 223 - 234.
[Abstract] [Full Text] [PDF]


Home page
RNAHome page
Y. SONG, E. TZIMA, K. OCHS, G. BASSILI, H. TRUSHEIM, M. LINDER, K. T. PREISSNER, and M. NIEPMANN
Evidence for an RNA chaperone function of polypyrimidine tract-binding protein in picornavirus translation
RNA, December 1, 2005; 11(12): 1809 - 1824.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
I. M. Terenin, S. E. Dmitriev, D. E. Andreev, E. Royall, G. J. Belsham, L. O. Roberts, and I. N. Shatsky
A Cross-Kingdom Internal Ribosome Entry Site Reveals a Simplified Mode of Internal Ribosome Entry
Mol. Cell. Biol., September 1, 2005; 25(17): 7879 - 7888.
[Abstract] [Full Text] [PDF]


Home page
J. Virol.Home page
P. Feng, D. N. Everly Jr., and G. S. Read
mRNA Decay during Herpes Simplex Virus (HSV) Infections: Protein-Protein Interactions Involving the HSV Virion Host Shutoff Protein and Translation Factors eIF4H and eIF4A
J. Virol., August 1, 2005; 79(15): 9651 - 9664.
[Abstract] [Full Text] [PDF]


Home page
J. Gen. Virol.Home page
R. Strong and G. J. Belsham
Sequential modification of translation initiation factor eIF4GI by two different foot-and-mouth disease virus proteases within infected baby hamster kidney cells: identification of the 3Cpro cleavage site
J. Gen. Virol., October 1, 2004; 85(10): 2953 - 2962.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
M. Phelan, R. J. Banks, G. Conn, and V. Ramesh
NMR studies of the structure and Mg2+ binding properties of a conserved RNA motif of EMCV picornavirus IRES element
Nucleic Acids Res., September 7, 2004; 32(16): 4715 - 4724.
[Abstract] [Full Text] [PDF]


Home page
J. Gen. Virol.Home page
G. Bassili, E. Tzima, Y. Song, L. Saleh, K. Ochs, and M. Niepmann
Sequence and secondary structure requirements in a highly conserved element for foot-and-mouth disease virus internal ribosome entry site activity and eIF4G binding
J. Gen. Virol., September 1, 2004; 85(9): 2555 - 2565.
[Abstract] [Full Text] [PDF]


Home page
J. Virol.Home page
A. V. Pisarev, L. S. Chard, Y. Kaku, H. L. Johns, I. N. Shatsky, and G. J. Belsham
Functional and Structural Similarities between the Internal Ribosome Entry Sites of Hepatitis C Virus and Porcine Teschovirus, a Picornavirus
J. Virol., May 1, 2004; 78(9): 4487 - 4497.
[Abstract] [Full Text] [PDF]


Home page
J. Virol.Home page
A. T. Clark, M. E. M. Robertson, G. L. Conn, and G. J. Belsham
Conserved Nucleotides within the J Domain of the Encephalomyocarditis Virus Internal Ribosome Entry Site Are Required for Activity and for Interaction with eIF4G
J. Virol., December 1, 2003; 77(23): 12441 - 12449.
[Abstract] [Full Text] [PDF]


Home page
RNAHome page
O. FERNANDEZ-MIRAGALL and E. MARTINEZ-SALAS
Structural organization of a viral IRES depends on the integrity of the GNRA motif
RNA, November 1, 2003; 9(11): 1333 - 1344.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
M. P. Rubtsova, D. V. Sizova, S. E. Dmitriev, D. S. Ivanov, V. S. Prassolov, and I. N. Shatsky
Distinctive Properties of the 5'-Untranslated Region of Human Hsp70 mRNA
J. Biol. Chem., June 13, 2003; 278(25): 22350 - 22356.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
V. G. Kolupaeva, I. B. Lomakin, T. V. Pestova, and C. U. T. Hellen
Eukaryotic Initiation Factors 4G and 4A Mediate Conformational Changes Downstream of the Initiation Codon of the Encephalomyocarditis Virus Internal Ribosomal Entry Site
Mol. Cell. Biol., January 15, 2003; 23(2): 687 - 698.
[Abstract] [Full Text] [PDF]


Home page
J. Virol.Home page
K. Ochs, A. Zeller, L. Saleh, G. Bassili, Y. Song, A. Sonntag, and M. Niepmann
Impaired Binding of Standard Initiation Factors Mediates Poliovirus Translation Attenuation
J. Virol., December 6, 2002; 77(1): 115 - 122.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
M. P. Byrd, M. Zamora, and R. E. Lloyd
Generation of Multiple Isoforms of Eukaryotic Translation Initiation Factor 4GI by Use of Alternate Translation Initiation Codons
Mol. Cell. Biol., July 1, 2002; 22(13): 4499 - 4511.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
C. A. Bradley, J. C. Padovan, T. L. Thompson, C. A. Benoit, B. T. Chait, and R. E. Rhoads
Mass Spectrometric Analysis of the N Terminus of Translational Initiation Factor eIF4G-1 Reveals Novel Isoforms
J. Biol. Chem., April 5, 2002; 277(15): 12559 - 12571.
[Abstract] [Full Text] [PDF]


Home page
J. Virol.Home page
K. Ochs, L. Saleh, G. Bassili, V. H. Sonntag, A. Zeller, and M. Niepmann
Interaction of Translation Initiation Factor eIF4B with the Poliovirus Internal Ribosome Entry Site
J. Virol., March 1, 2002; 76(5): 2113 - 2122.
[Abstract] [Full Text] [PDF]


Home page
J. Virol.Home page
D. R. Gallie
Cap-Independent Translation Conferred by the 5' Leader of Tobacco Etch Virus Is Eukaryotic Initiation Factor 4G Dependent
J. Virol., December 15, 2001; 75(24): 12141 - 12152.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
C. U.T. Hellen and P. Sarnow
Internal ribosome entry sites in eukaryotic mRNA molecules
Genes & Dev., July 1, 2001; 15(13): 1593 - 1612.
[Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
T. V. Pestova, V. G. Kolupaeva, I. B. Lomakin, E. V. Pilipenko, I. N. Shatsky, V. I. Agol, and C. U. T. Hellen
Molecular mechanisms of translation initiation in eukaryotes
PNAS, June 19, 2001; 98(13): 7029 - 7036.
[Abstract] [Full Text] [PDF]


Home page
J. Gen. Virol.Home page
E. Martínez-Salas, R. Ramos, E. Lafuente, and S. López de Quinto
Functional interactions in internal translation initiation directed by viral and cellular IRES elements
J. Gen. Virol., May 1, 2001; 82(5): 973 - 984.
[Full Text]


Home page
J. Gen. Virol.Home page
L. Saleh, R. C. Rust, R. Füllkrug, E. Beck, G. Bassili, K. Ochs, and M. Niepmann
Functional interaction of translation initiation factor eIF4G with the foot-and-mouth disease virus internal ribosome entry site
J. Gen. Virol., April 1, 2001; 82(4): 757 - 763.
[Abstract] [Full Text]


Home page
Nucleic Acids ResHome page
R. v. Lipzig, M. V. Montagu, M. Cornelissen, and F. Meulewaeter
Functionality of the STNV translational enhancer domain correlates with affinity for two wheat germ factors
Nucleic Acids Res., March 1, 2001; 29(5): 1080 - 1086.
[Abstract] [Full Text] [PDF]


Home page
Cold Spring Harb Symp Quant BiolHome page
I.K. ALI and R.J. JACKSON
The Translation of Capped mRNAs Has an Absolute Requirement for the Central Domain of eIF4G but Not for the Cap-binding Initiation Factor eIF4E
Cold Spring Harb Symp Quant Biol, January 1, 2001; 66(0): 377 - 388.
[Abstract] [PDF]


Home page
Mol. Cell. Biol.Home page
I. B. Lomakin, C. U. T. Hellen, and T. V. Pestova
Physical Association of Eukaryotic Initiation Factor 4G (eIF4G) with eIF4A Strongly Enhances Binding of eIF4G to the Internal Ribosomal Entry Site of Encephalomyocarditis Virus and Is Required for Internal Initiation of Translation
Mol. Cell. Biol., August 15, 2000; 20(16): 6019 - 6029.
[Abstract] [Full Text]


Home page
Genes Dev.Home page
E. V. Pilipenko, T. V. Pestova, V. G. Kolupaeva, E. V. Khitrina, A. N. Poperechnaya, V. I. Agol, and C. U.T. Hellen
A cell cycle-dependent protein serves as a template-specific translation initiation factor
Genes & Dev., August 15, 2000; 14(16): 2028 - 2045.
[Abstract] [Full Text]


Home page
J. Virol.Home page
V. G. Kolupaeva, T. V. Pestova, and C. U. T. Hellen
An Enzymatic Footprinting Analysis of the Interaction of 40S Ribosomal Subunits with the Internal Ribosomal Entry Site of Hepatitis C Virus
J. Virol., July 15, 2000; 74(14): 6242 - 6250.
[Abstract] [Full Text]


Home page
J. Virol.Home page
K. Ochs, R. C. Rust, and M. Niepmann
Translation Initiation Factor eIF4B Interacts with a Picornavirus Internal Ribosome Entry Site in both 48S and 80S Initiation Complexes Independently of Initiator AUG Location
J. Virol., September 1, 1999; 73(9): 7505 - 7514.
[Abstract] [Full Text]


Home page
Mol. Cell. Biol.Home page
O. Sella, G. Gerlitz, S.-Y. Le, and O. Elroy-Stein
Differentiation-Induced Internal Translation of c-sis mRNA: Analysis of the cis Elements and Their Differentiation-Linked Binding to the hnRNP C Protein
Mol. Cell. Biol., August 1, 1999; 19(8): 5429 - 5440.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
N. L. Korneeva, B. J. Lamphear, F. L. C. Hennigan, W. C. Merrick, and R. E. Rhoads
Characterization of the Two eIF4A-binding Sites on Human eIF4G-1
J. Biol. Chem., January 19, 2001; 276(4): 2872 - 2879.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
N. L. Korneeva, B. J. Lamphear, F. L. C. Hennigan, and R. E. Rhoads
Mutually Cooperative Binding of Eukaryotic Translation Initiation Factor (eIF) 3 and eIF4A to Human eIF4G-1
J. Biol. Chem., December 22, 2000; 275(52): 41369 - 41376.
[Abstract] [Full Text] [PDF]




HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
 All ASBMB Journals   Molecular and Cellular Proteomics 
 Journal of Lipid Research   ASBMB Today 
Copyright © 1998 by the American Society for Biochemistry and Molecular Biology.