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J Biol Chem, Vol. 273, Issue 8, 4329-4337, February 20, 1998
The Manganese-containing Ribonucleotide Reductase of
Corynebacterium ammoniagenes Is a Class Ib Enzyme
Franck
Fieschi ,
Eduard
Torrents ,
Larisa
Toulokhonova ,
Albert
Jordan ,
Ulf
Hellman§§,
Jordi
Barbe ,
Isidre
Gibert ,
Margareta
Karlsson , and
Britt-Marie
Sjöberg
From the Department of Molecular Biology, Stockholm
University, S-106 91 Stockholm, Sweden, the Department of
Genetics & Microbiology, Faculty of Sciences, Autonomous University of
Barcelona, Bellaterra, 08193 Barcelona, Spain, and the
§§ Ludwig Institute for Cancer Research,
Biomedical Center, Box 595, S-751 24 Uppsala, Sweden
Ribonucleotide reductases (RNRs) are key enzymes
in living cells that provide the precursors of DNA synthesis. The three
characterized classes of RNRs differ by their metal cofactor and their
stable organic radical. We have purified to near homogeneity the
enzymatically active Mn-containing RNR of Corynebacterium
ammoniagenes, previously claimed to represent a fourth RNR class.
N-terminal and internal peptide sequence analyses clearly indicate that
the C. ammoniagenes RNR is a class Ib enzyme. In parallel,
we have cloned a 10-kilobase pair fragment from C. ammoniagenes genomic DNA, using primers specific for the known
class Ib RNR. The cloned class Ib locus contains the
nrdHIEF genes typical for class Ib RNR operon. The deduced
amino acid sequences of the nrdE and nrdF genes
matched the peptides from the active enzyme, demonstrating that
C. ammoniagenes RNR is composed of R1E and R2F components
typical of class Ib. We also show that the Mn-containing RNR has a
specificity for the NrdH-redoxin and a response to allosteric effectors
that are typical of class Ib RNRs. Electron paramagnetic resonance and atomic absorption analyses confirm the presence of Mn as a cofactor and
show, for the first time, insignificant amounts of iron and cobalt
found in the other classes of RNR. Our discovery that C. ammoniagenes RNR is a class Ib enzyme and possesses all the
highly conserved amino acid side chains that are known to ligate two ferric ions in other class I RNRs evokes new, challenging questions about the control of the metal site specificity in RNR. The cloning of
the entire NrdHIEF locus of C. ammoniagenes
will facilitate further studies along these lines.
Copyright © 1998 by The American Society for Biochemistry and Molecular Biology, Inc.

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Copyright © 1998 by the American Society for Biochemistry and Molecular Biology.
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