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J Biol Chem, Vol. 274, Issue 18, 12217-12221, April 30, 1999
Purification of the Spliced Leader Ribonucleoprotein Particle
from Leptomonas collosoma Revealed the Existence of an Sm
Protein in Trypanosomes
CLONING THE SmE HOMOLOGUE
Igor
Goncharov,
Zsofia
Palfi ,
Albrecht
Bindereif , and
Shulamit
Michaeli
From the Department of Biological Chemistry, The Weizmann Institute
of Science, Rehovot, Israel 76100 and the Institut
für Biochemie, Humboldt-Universität/Charité
Monbijou-Strasse 2a, D-10117 Berlin, Germany
Trans-splicing in trypanosomes
involves the addition of a common spliced leader (SL) sequence, which
is derived from a small RNA, the SL RNA, to all mRNA precursors.
The SL RNA is present in the cell in the form of a ribonucleoprotein,
the SL RNP. Using conventional chromatography and affinity selection
with 2'-O-methylated RNA oligonucleotides at high ionic
strength, five proteins of 70, 16, 13, 12, and 8 kDa were co-selected
with the SL RNA from Leptomonas collosoma, representing the
SL RNP core particle. Under conditions of lower ionic strength,
additional proteins of 28 and 20 kDa were revealed. On the basis of
peptide sequences, the gene coding for a protein with a predicted
molecular weight of 11.9 kDa was cloned and identified as homologue of
the cis-spliceosomal SmE. The protein carries the Sm motifs
1 and 2 characteristic of Sm antigens that bind to all known
cis-spliceosomal uridylic acid-rich small nuclear RNAs (U
snRNAs), suggesting the existence of Sm proteins in trypanosomes. This
finding is of special interest because trypanosome snRNPs are the only
snRNPs examined to date that are not recognized by anti-Sm antibodies.
Because of the early divergence of trypanosomes from the eukaryotic
lineage, the trypanosome SmE protein represents one of the primordial
Sm proteins in nature.
Copyright © 1999 by The American Society for Biochemistry and Molecular Biology, Inc.

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Copyright © 1999 by the American Society for Biochemistry and Molecular Biology.
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