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Originally published In Press as doi:10.1074/jbc.M003386200 on June 8, 2000

J. Biol. Chem., Vol. 275, Issue 35, 26799-26805, September 1, 2000
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NMR Studies of Active N-terminal Peptides of Stromal Cell-derived Factor-1
STRUCTURAL BASIS FOR RECEPTOR BINDING*

Elena L. ElisseevaDagger , Carolyn M. SlupskyDagger , Matthew P. Crump§, Ian Clark-Lewis, and Brian D. Sykes||

From the Protein Engineering Network of Centers of Excellence and the Department of Biochemistry, 713 Heritage Medical Research Center, University of Alberta, Edmonton, Alberta T6G 2S2, Canada

Stromal cell-derived factor 1 (SDF-1), a member of the CXC chemokine family, is the only chemokine to bind to the receptor CXCR4. This receptor is also a co-receptor for syncytia-inducing forms of HIV in CD4+ cells. In addition, SDF-1 is responsible for attracting mature lymphocytes to the bone marrow and can therefore contribute to host versus graft rejection in bone marrow transplantation. Clearly, by manipulating SDF-1 activity, we could find a possible anti-viral AIDS treatment and aid in bone marrow transplantation. SDF-1 binds to CXCR4 primarily via the N terminus, which appears flexible in the recently determined three-dimensional structure of SDF-1. Strikingly, short N-terminal SDF-1 peptides have been shown to have significant SDF-1 activity. By using NMR, we have determined the major conformation of the N terminus of SDF-1 in a 17-mer (residues 1-17 of SDF-1) and a 9-mer dimer (residues 1-9 of SDF-1 linked by a disulfide bond at residue 9). Residues 5-8 and 11-14 form similar structures that can be characterized as a beta -turn of the beta -alpha R type. These structural motifs are likely to be interconverting with other states, but the major conformation may be important for recognition in receptor binding. These results suggest for the first time that there may be a link between structuring of short N-terminal chemokine peptides and their ability to activate their receptor. These studies will act as a starting point for synthesizing non-peptide analogs that act as CXCR4 antagonists.


* The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

Dagger These authors contributed equally to this work.

§ Present address: Dept. of Biochemistry and Molecular Biology, University of Southampton, Bassett Crescent East, Southampton, SO16 7PX, UK.

Present address: Biomedical Research Centre, University of British Columbia, 2222 Health Sciences Mall, Vancouver, BC V6T 1Z3, Canada.

|| To whom correspondence should be addressed. Tel.: 780-492-6540; Fax: 780-492-1473; E-mail: brian.sykes@ualberta.ca.


Copyright © 2000 by The American Society for Biochemistry and Molecular Biology, Inc.
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