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Originally published In Press as doi:10.1074/jbc.M101264200 on March 9, 2001

J. Biol. Chem., Vol. 276, Issue 21, 18423-18429, May 25, 2001
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Functional Geometry of the Permeation Pathway of Ca2+-activated Clminus Channels Inferred from Analysis of Voltage-dependent Block*

Zhiqiang Qu and H. Criss HartzellDagger

From the Department of Cell Biology, Emory University School of Medicine, Atlanta, Georgia 30322-3030

We examined the voltage-dependent block of Ca2+-activated Cl- channels by anthacene-9-carboxylic acid (A9C), diphenylamine-2-carboxylic acid (DPC), 4,4'-diisothiocyanostilbene-2,2'-disulfonic acid (DIDS), and niflumic acid (NFA) in excised inside-out and outside-out patches from Xenopus oocytes. The fraction of the voltage field (delta ) experienced by the blocking drug was determined from the voltage dependence of block. All the drugs blocked by entering the channel from the outside. delta  was 0.6 for A9C, 0.3 for DPC and DIDS, and <0.1 for NFA. Because the voltage dependence of the drugs differed, the order of potency was also voltage-dependent. At +100 mV the order of potency was NFA > A9C > DIDS > DPC (KiM) = 10.1, 18.3, 48, and 111, respectively). Because the drugs are hydrophobic, they can cross the bilayer when applied from the inside and block the channel from the outside. The equilibrium geometries of the blockers were determined by molecular modeling and compared with their blocking positions (delta ). This analysis suggests that the channel is an elliptical cone with the largest opening facing the extracellular space. The selectivity filter has an apparent size of 0.33 × 0.75 nm, because C(CN)3-, which has these dimensions, permeates. The external opening is at least 0.60 × 0.94 nm, because DPC has these dimensions and penetrates the channel ~30%.


* This work was supported by National Institutes of Health Grant GM 60448.The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

Dagger To whom correspondence should be addressed. Tel.: 404-727-0444; Fax: 404-727-6256; E-mail: criss@cellbio.emory.edu.


Copyright © 2001 by The American Society for Biochemistry and Molecular Biology, Inc.
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