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Originally published In Press as doi:10.1074/jbc.M102893200 on April 19, 2001

J. Biol. Chem., Vol. 276, Issue 26, 23881-23887, June 29, 2001
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A Gal4-sigma 54 Hybrid Protein That Functions as a Potent Activator of RNA Polymerase II Transcription in Yeast*

Bo-Shiun ChenDagger , Zu-Wen SunDagger §, and Michael Hampsey

From the Department of Biochemistry, Division of Nucleic Acids Enzymology, Robert Wood Johnson Medical School, Piscataway, New Jersey 08854-5635

The bacterial sigma 54 protein associates with core RNA polymerase to form a holoenzyme complex that renders cognate promoters enhancer-dependent. Although unusual in bacteria, enhancer-dependent transcription is the paradigm in eukaryotes. Here we report that a fragment of Escherichia coli sigma 54 encompassing amino acid residues 29-177 functions as a potent transcriptional activator in yeast when fused to a Gal4 DNA binding domain. Activation by Gal4-sigma 54 is TATA-dependent and requires the SAGA coactivator complex, suggesting that Gal4-sigma 54 functions by a normal mechanism of transcriptional activation. Surprisingly, deletion of the AHC1 gene, which encodes a polypeptide unique to the ADA coactivator complex, stimulates Gal4-sigma 54-mediated activation and enhances the toxicity of Gal4-sigma 54. Accordingly, the SAGA and ADA complexes, both of which include Gcn5 as their histone acetyltransferase subunit, exert opposite effects on transcriptional activation by Gal4-sigma 54. Gal4-sigma 54 activation and toxicity are also dependent upon specific sigma 54 residues that are required for activator-responsive promoter melting by sigma 54 in bacteria, implying that activation is a consequence of sigma 54-specific features rather than a structurally fortuitous polypeptide fragment. As such, Gal4-sigma 54 represents a novel tool with the potential to provide insight into the mechanism by which natural activators function in eukaryotic cells.


* This work was supported by National Institutes of Health Grant GM39484 (to M. H.).The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

Dagger These two authors contributed equally to this work and should be considered co-first authors.

§ Present address: Dept. of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA 22908.

To whom correspondence should be addressed: Dept. of Biochemistry, Robert Wood Johnson Medical School, 675 Hoes Lane, Piscataway, NJ 08854-5635. Tel.: 732-235-5888; Fax: 732-235-5889; E-mail: hampsemi@umdnj.edu.


Copyright © 2001 by The American Society for Biochemistry and Molecular Biology, Inc.
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