Advertisement
JBC

HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
 QUICK SEARCH:   [advanced]


     


Originally published In Press as doi:10.1074/jbc.M103610200 on August 24, 2001

J. Biol. Chem., Vol. 276, Issue 44, 41343-41349, November 2, 2001
This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow All Versions of this Article:
276/44/41343    most recent
M103610200v1
Right arrow Submit a Letter to Editor
Right arrow Alert me when this article is cited
Right arrow Alert me when eLetters are posted
Right arrow Alert me if a correction is posted
Right arrow Citation Map
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrowRequest Permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Uchiyama, T.
Right arrow Articles by Watanabe, T.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Uchiyama, T.
Right arrow Articles by Watanabe, T.
Social Bookmarking
 Add to CiteULike   Add to Complore   Add to Connotea   Add to Del.icio.us   Add to Digg   Add to Reddit   Add to Technorati  
What's this?

Roles of the Exposed Aromatic Residues in Crystalline Chitin Hydrolysis by Chitinase A from Serratia marcescens 2170*

Taku UchiyamaDagger , Fuminori KatounoDagger , Naoki NikaidouDagger , Takamasa Nonaka§, Junji Sugiyama, and Takeshi WatanabeDagger ||

From the Dagger  Department of Applied Biological Chemistry, Faculty of Agriculture, Niigata University, 8050 Ikarashi-2, Niigata 950-2181, Japan, the § Department of BioEngineering, Nagaoka University of Technology, Nagaoka, Niigata 940-2188, Japan, and  Wood Research Institute, Kyoto University, Uji, Kyoto, 611-0011, Japan

Four exposed aromatic residues, two in the N-terminal domain (Trp-69 and Trp-33) and two in the catalytic domain (Trp-245 and Phe-232) of Serratia marcescens chitinase A, are linearly aligned with the deep catalytic cleft. To investigate the importance of these residues in the binding activity and hydrolyzing activity against insoluble chitin, site-directed mutagenesis to alanine was carried out. The substitution of Trp-69, Trp-33, or Trp-245 significantly reduced the binding activity to both highly crystalline beta -chitin and colloidal chitin. The substitution of Phe-232, which is located closest to the catalytic cleft, did not affect the binding activity. On the other hand, the hydrolyzing activity against beta -chitin microfibrils was significantly reduced by the substitution of any one of the four aromatic residues including Phe-232. None of the mutations reduced the hydrolyzing activity against soluble substrates. These results clearly demonstrate that the four exposed aromatic residues are essential determinants for crystalline chitin hydrolysis. Three of them, two in the N-terminal domain and one in the catalytic domain, play vital roles in the chitin binding. Phe-232 appeared to be important for guiding the chitin chain into the catalytic cleft. Based on these observations, a model for processive hydrolysis of crystalline chitin by chitinase A is proposed.


* This work was supported in part by Grant-in-aid for Scientific Research 12660070 from the Ministry of Education, Science, and Culture of Japan.The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

|| To whom correspondence should be addressed. Tel.: 81-25-262-6647; Fax: 81-25-262-6854; E-mail: wata@agr.niigata-u.ac.jp.


Copyright © 2001 by The American Society for Biochemistry and Molecular Biology, Inc.
Add to CiteULike CiteULike   Add to Complore Complore   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us   Add to Digg Digg   Add to Reddit Reddit   Add to Technorati Technorati    What's this?


This article has been cited by other articles:


Home page
J. Biol. Chem.Home page
H. Zakariassen, B. B. Aam, S. J. Horn, K. M. Varum, M. Sorlie, and V. G. H. Eijsink
Aromatic Residues in the Catalytic Center of Chitinase A from Serratia marcescens Affect Processivity, Enzyme Activity, and Biomass Converting Efficiency
J. Biol. Chem., April 17, 2009; 284(16): 10610 - 10617.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
S. J. Horn, P. Sikorski, J. B. Cederkvist, G. Vaaje-Kolstad, M. Sorlie, B. Synstad, G. Vriend, K. M. Varum, and V. G. H. Eijsink
Costs and benefits of processivity in enzymatic degradation of recalcitrant polysaccharides
PNAS, November 28, 2006; 103(48): 18089 - 18094.
[Abstract] [Full Text] [PDF]


Home page
J. Gen. Virol.Home page
V. L. Young, R. M. Simpson, and V. K. Ward
Characterization of an exochitinase from Epiphyas postvittana nucleopolyhedrovirus (family Baculoviridae)
J. Gen. Virol., December 1, 2005; 86(12): 3253 - 3261.
[Abstract] [Full Text] [PDF]


Home page
Appl. Environ. Microbiol.Home page
Q. Li, F. Wang, Y. Zhou, and X. Xiao
Putative Exposed Aromatic and Hydroxyl Residues on the Surface of the N-Terminal Domains of Chi1 from Aeromonas caviae CB101 Are Essential for Chitin Binding and Hydrolysis
Appl. Envir. Microbiol., November 1, 2005; 71(11): 7559 - 7561.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
G. Vaaje-Kolstad, S. J. Horn, D. M. F. van Aalten, B. Synstad, and V. G. H. Eijsink
The Non-catalytic Chitin-binding Protein CBP21 from Serratia marcescens Is Essential for Chitin Degradation
J. Biol. Chem., August 5, 2005; 280(31): 28492 - 28497.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
G. Vaaje-Kolstad, D. R. Houston, A. H. K. Riemen, V. G. H. Eijsink, and D. M. F. van Aalten
Crystal Structure and Binding Properties of the Serratia marcescens Chitin-binding Protein CBP21
J. Biol. Chem., March 25, 2005; 280(12): 11313 - 11319.
[Abstract] [Full Text] [PDF]


Home page
J BiochemHome page
F. Katouno, M. Taguchi, K. Sakurai, T. Uchiyama, N. Nikaidou, T. Nonaka, J. Sugiyama, and T. Watanabe
Importance of Exposed Aromatic Residues in Chitinase B from Serratia marcescens 2170 for Crystalline Chitin Hydrolysis
J. Biochem., August 1, 2004; 136(2): 163 - 168.
[Abstract] [Full Text] [PDF]


Home page
JNMHome page
R. Siaens, V. G.H. Eijsink, R. Dierckx, and G. Slegers
123I-Labeled Chitinase as Specific Radioligand for In Vivo Detection of Fungal Infections in Mice
J. Nucl. Med., July 1, 2004; 45(7): 1209 - 1216.
[Abstract] [Full Text] [PDF]


Home page
Protein Eng Des SelHome page
S. Gaseidnes, B. Synstad, X. Jia, H. Kjellesvik, G. Vriend, and V. G.H. Eijsink
Stabilization of a chitinase from Serratia marcescens by Gly->Ala and Xxx->Pro mutations
Protein Eng. Des. Sel., November 1, 2003; 16(11): 841 - 846.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
B. Campanini, S. Raboni, S. Vaccari, L. Zhang, P. F. Cook, T. L. Hazlett, A. Mozzarelli, and S. Bettati
Surface-exposed Tryptophan Residues Are Essential for O-Acetylserine Sulfhydrylase Structure, Function, and Stability
J. Biol. Chem., September 26, 2003; 278(39): 37511 - 37519.
[Abstract] [Full Text] [PDF]


Home page
J. Bacteriol.Home page
T. Uchiyama, R. Kaneko, J. Yamaguchi, A. Inoue, T. Yanagida, N. Nikaidou, M. Regue, and T. Watanabe
Uptake of N,N'-Diacetylchitobiose [(GlcNAc)2] via the Phosphotransferase System Is Essential for Chitinase Production by Serratia marcescens 2170
J. Bacteriol., March 15, 2003; 185(6): 1776 - 1782.
[Abstract] [Full Text] [PDF]


Home page
Appl. Environ. Microbiol.Home page
J. E. Barboza-Corona, E. Nieto-Mazzocco, R. Velazquez-Robledo, R. Salcedo-Hernandez, M. Bautista, B. Jimenez, and J. E. Ibarra
Cloning, Sequencing, and Expression of the Chitinase Gene chiA74 from Bacillus thuringiensis
Appl. Envir. Microbiol., February 1, 2003; 69(2): 1023 - 1029.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
P. Varnai, X. Lin, S. B. Lee, G. Tuymetova, T. Bondeva, A. Spat, S. G. Rhee, G. Hajnoczky, and T. Balla
Inositol Lipid Binding and Membrane Localization of Isolated Pleckstrin Homology (PH) Domains. STUDIES ON THE PH DOMAINS OF PHOSPHOLIPASE C delta 1 AND p130
J. Biol. Chem., July 19, 2002; 277(30): 27412 - 27422.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
J.-G. Jee, T. Ikegami, M. Hashimoto, T. Kawabata, M. Ikeguchi, T. Watanabe, and M. Shirakawa
Solution Structure of the Fibronectin Type III Domain from Bacillus circulans WL-12 Chitinase A1
J. Biol. Chem., January 4, 2002; 277(2): 1388 - 1397.
[Abstract] [Full Text] [PDF]




HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
 All ASBMB Journals   Molecular and Cellular Proteomics 
 Journal of Lipid Research   ASBMB Today 
Copyright © 2001 by the American Society for Biochemistry and Molecular Biology.
Advertisement
spacer
Advertisement
Advertisement