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Originally published In Press as doi:10.1074/jbc.M103358200 on September 13, 2001

J. Biol. Chem., Vol. 276, Issue 47, 44052-44063, November 23, 2001
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Determinants for Membrane Association of the Hepatitis C Virus RNA-dependent RNA Polymerase*

Juliane Schmidt-MendeDagger , Elke BieckDagger , Thomas HügleDagger , François Penin§, Charles M. Rice, Hubert E. BlumDagger , and Darius MoradpourDagger ||

From the Dagger  Department of Medicine II, University of Freiburg, D-79106 Freiburg, Germany, the § Institut de Biologie et Chimie des Protéines, CNRS-UMR 5086, F-69367, Lyon Cedex 07, France, and the  Center for the Study of Hepatitis C, Rockefeller University, New York, New York 10021

The hepatitis C virus (HCV) RNA-dependent RNA polymerase (RdRp), represented by nonstructural protein 5B (NS5B), is believed to form a membrane-associated RNA replication complex together with other nonstructural proteins and as yet unidentified host components. However, the determinants for membrane association of this essential viral enzyme have not been defined. By double label immunofluorescence analyses, NS5B was found in the endoplasmic reticulum (ER) or an ER-like modified compartment both when expressed alone or in the context of the entire HCV polyprotein. The carboxyl-terminal 21 amino acid residues were necessary and sufficient to target NS5B or a heterologous protein to the cytosolic side of the ER membrane. This hydrophobic domain is highly conserved among 269 HCV isolates analyzed and predicted to form a transmembrane alpha -helix. Association of NS5B with the ER membrane occurred by a posttranslational mechanism that was ATP-independent. These features define the HCV RdRp as a new member of the tail-anchored protein family, a class of integral membrane proteins that are membrane-targeted posttranslationally via a carboxyl-terminal insertion sequence. Formation of the HCV replication complex, therefore, involves specific determinants for membrane association that represent potential targets for antiviral intervention.


* This work was supported by Grant Mo 799/1-2 from the Deutsche Forschungsgemeinschaft (to D. M. and H. E. B.) and by grants from the United States Public Health Service and the Greenberg Medical Research Foundation (to C. M. R.).The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

|| To whom correspondence should be addressed: Dept. of Medicine II, University Hospital Freiburg, Hugstetter Strasse 55, D-79106 Freiburg, Germany. Tel.: 49 761 270 3510; Fax: 49 761 270 3610; E-mail: moradpou@ruf.uni-freiburg.de.


Copyright © 2001 by The American Society for Biochemistry and Molecular Biology, Inc.
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