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Originally published In Press as doi:10.1074/jbc.M108847200 on October 30, 2001

J. Biol. Chem., Vol. 277, Issue 2, 1553-1559, January 11, 2002
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The beta -Hairpin Motif of UvrB Is Essential for DNA Binding, Damage Processing, and UvrC-mediated Incisions*

Milan SkorvagaDagger §, Karsten Theis, Bhaskar S. MandavilliDagger , Caroline Kisker, and Bennett Van HoutenDagger ||

From the Dagger  Laboratory of Molecular Genetics, NIEHS, National Institutes of Health, Research Triangle Park, North Carolina 27709, § Department of Molecular Genetics, Cancer Research Institute, Slovak Academy of Sciences, Vlarska 7, 833 91 Bratislava, Slovakia,  Department of Pharmacological Sciences, Center for Structural Biology, State University of New York, Stony Brook, New York 11794-5115

UvrB plays a major role in recognition and processing of DNA lesions during nucleotide excision repair. The crystal structure of UvrB revealed a similar fold as found in monomeric DNA helicases. Homology modeling suggested that the beta -hairpin motif of UvrB might be involved in DNA binding (Theis, K., Chen, P. J., Skorvaga, M., Van Houten, B., and Kisker, C. (1999) EMBO J. 18, 6899-6907). To determine a role of the beta -hairpin of Bacillus caldotenax UvrB, we have constructed a deletion mutant, Delta beta h UvrB, which lacks residues Gln-97-Asp-112 of the beta -hairpin. Delta beta h UvrB does not form a stable UvrB-DNA pre-incision complex and is inactive in UvrABC-mediated incision. However, Delta beta h UvrB is able to bind to UvrA and form a complex with UvrA and damaged DNA, competing with wild type UvrB. In addition, Delta beta h UvrB shows wild type-like ATPase activity in complex with UvrA that is stimulated by damaged DNA. In contrast to wild type UvrB, the ATPase activity of mutant UvrB does not lead to a destabilization of the damaged duplex. These results indicate that the conserved beta -hairpin motif is a major factor in DNA binding.


* This research was supported by grants from the Department of Energy and from the Pew Scholars Program in the Biomedical Sciences (to C. K.).The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

|| To whom correspondence should be addressed: NIEHS, P. O. Box 12233, MD D3-01, 111 T. W. Alexander Dr., Research Triangle Park, NC 27709. Tel.: 919-541-2799; E-mail: vanhout1@niehs.nih.gov.


Copyright © 2002 by The American Society for Biochemistry and Molecular Biology, Inc.
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