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Originally published In Press as doi:10.1074/jbc.M204278200 on June 5, 2002

J. Biol. Chem., Vol. 277, Issue 33, 30055-30065, August 16, 2002
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Functional Domains and DNA-binding Sequences of RFLAT-1/KLF13, a Krüppel-like Transcription Factor of Activated T Lymphocytes*

An SongDagger §, Anita PatelDagger , Kimberlee ThamatrakolnDagger ||, Chian LiuDagger , Dongdong FengDagger , Carol ClaybergerDagger **, and Alan M. KrenskyDagger Dagger Dagger

From the Departments of Dagger  Pediatrics and ** Cardiothoracic Surgery, Stanford University School of Medicine, Stanford, California 94305-5164

RFLAT-1/KLF13, a member of the Krüppel-like family of transcription factors, was identified as a transcription factor expressed 3-5 days after T lymphocyte activation. It binds to the promoter of the chemokine gene RANTES (regulated on activation normal T cell expressed and secreted) and regulates its "late" expression in activated T-cells. In this study, a series of experiments to define the functional domains of RFLAT-1/KLF13 were undertaken to further advance the understanding of the molecular mechanisms underlying transcriptional regulation by this factor. Using the GAL4 fusion system, distinct transcriptional activation and repression domains were identified. The RFLAT-1 minimum activation domain is localized to amino acids 1-35, whereas the repression domain resides in amino acids 67-168. Deletion analysis on the RFLAT-1 protein further supports these domain functions. The RFLAT-1 activation domain is similar to that of its closest family member, basic transcription element-binding protein 1. This domain is highly hydrophobic, and site-directed mutagenesis demonstrated that both negatively charged and hydrophobic residues are important for transactivation. The nuclear localization signal of RFLAT-1 was also identified using the RFLAT-1/green fluorescence protein fusion approach. RFLAT-1 contains two potent, independent nuclear localization signals; one is immediately upstream of the zinc finger DNA-binding domain, and the other is within the zinc fingers. Using mutational analysis, we also determined that the critical binding sequence of RFLAT-1 is CTCCC. The intact CTCCC box on the RANTES promoter is necessary for RFLAT-1-mediated RANTES transcription and is also required for the synergy between RFLAT-1 and NF-kappa B proteins.


* This work was supported by Grant DK35008 from the National Institutes of Health (to A. M. K.), by Grant PF-77419 from the Elizabeth Glaser Pediatric AIDS Foundation (to A. S.), and by the Satellite Dialysis Young Investigator Grant of the National Kidney Foundation (to A. S.).The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

§ To whom correspondence should be addressed: Div. of Immunology and Transplantation Biology, Dept. of Pediatrics, Stanford University School of Medicine, CCSR Room 2105C, 300 Pasteur Dr., Stanford, CA 94305-5164.

Supported by the Satellite Dialysis Centers Fund in Nephrology. Present address: Div. of Nephrology, Dept. of Medicine, Henry Ford Hospital, Detroit, MI 48202.

|| Present address: Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA 92093-0202.

Dagger Dagger Shelagh Galligan Professor of Pediatrics.


Copyright © 2002 by The American Society for Biochemistry and Molecular Biology, Inc.
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