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J. Biol. Chem., Vol. 277, Issue 36, 32473-32479, September 6, 2002
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From the Selected sequences in the DNA double helix can be
specifically recognized by oligonucleotides via hydrogen bonding
interactions. The resulting triple helix can modulate DNA metabolism
and especially interfere with transcription in a gene-specific manner.
To explore the potential of triplex-forming oligonucleotides (TFOs) as
gene repressors, a TFO was designed to target a 16-bp sequence
within the third intron of the human intercellular-adhesion molecule-1 (ICAM-1) gene, which plays a key role in initiating inflammation. TFO
binding to its ICAM-1 target sequence was characterized in vitro and also demonstrated in cell nuclei with the set-up of a
novel magnetic capture assay, which represents a general experimental approach to the detection of specific TFO binding and to the
determination of the accessibility of a given genomic DNA locus. In a
human keratinocyte cell line (A431), we observed that: (i) the ICAM-1 target sequence in the chromatin context within the nuclei is still
available for triplex formation and (ii) TFO inhibits sequence and
gene-specific interferon-
Department of Dermatology,
Ludwig-Maximilians University, Frauenlobstr. 9-11, 80337 München,
Germany and the § Laboratoire de Biophysique, Muséum
National d'Histoire Naturelle, CNRS
UMR8646/INSERM U565, Paris, France
-induced ICAM-1 surface expression. Collectively, the data demonstrate effective and specific inhibition of
ICAM-1 expression by TFO treatment and support the view that triplex-mediated gene targeting might be a valuable
technique for anti-inflammatory or anticancer strategies.
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