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Originally published In Press as doi:10.1074/jbc.M208960200 on September 24, 2002

J. Biol. Chem., Vol. 277, Issue 50, 48099-48106, December 13, 2002
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Membrane Topology of the Acyl-Lipid Desaturase from Bacillus subtilis*,

Alejandra R. DiazDagger §, María C. MansillaDagger §||, Alejandro J. VilaDagger **Dagger Dagger , and Diego de MendozaDagger §§§

From the Dagger  Instituto de Biología Molecular y Celular de Rosario and Departamentos de § Microbiología and ** Química Biológica, Area Biofísica, Facultad de Ciencias Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario, S2002LRK Rosario, Argentina

The Bacillus subtilis acyl-lipid desaturase (Delta 5-Des) is an iron-dependent integral membrane protein, able to selectively introduce double bonds into long chain fatty acids. Structural information on membrane-bound desaturases is still limited, and the present topological information is restricted to hydropathy plots or sequence comparison with the evolutionary related alkane hydroxylase. The topology of Delta 5-Des was determined experimentally in Escherichia coli using a set of nine different fusions of N-terminal fragments of Delta 5-Des with the reporter alkaline phosphatase (Delta 5-Des-PhoA). The alkaline phosphatase activities of cells expressing the Delta 5-Des-PhoA fusions, combined with site-directed mutagenesis of His residues identified in most desaturases, suggest that a tripartite motif of His essential for catalysis is located on the cytoplasmic phase of the membrane. These data, together with surface Lys biotinylation experiments, support a model for Delta 5-Des as a polytopic membrane protein with six transmembrane- and one membrane-associated domain, which likely represents a substrate-binding motif. This study provides the first experimental evidence for the topology of a plasma membrane fatty acid desaturase. On the basis of our results and the presently available hydrophobicity profile of many acyl-lipid desaturases, we propose that these enzymes contain a new transmembrane domain that might play a critical role in the desaturation of fatty acids esterified in glycerolipids.


* This work was supported in part by the Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET) and Agencia Nacional de Promoción Científica y Tecnológica.The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

The on-line version of this article (available at http://www.jbc.org) contains Supplemental Material.

Supported by a predoctoral Fondo Para el Mejoramiento de la Calidad Universitaria (FOMEC) grant from the Departamento de Biología, Bioquímica y Farmacia de la Universidad Nacional del Sur.

|| Postdoctoral fellow from CONICET.

Dagger Dagger Career Investigator from CONICET and International Research Scholar of the Howard Hughes Medical Institute.

§§ Career Investigator from CONICET and International Research Scholar of the Howard Hughes Medical Institute. To whom correspondence should be addressed: Suipacha 531, Universidad Nacional de Rosario, S2002LRK Rosario, Argentina. Tel.: 54-341-4350661; Fax: 54-341-4390465; E-mail: diegonet@citynet.net.ar.


Copyright © 2002 by The American Society for Biochemistry and Molecular Biology, Inc.
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