Originally published In Press as doi:10.1074/jbc.M301232200 on April 3, 2003
J. Biol. Chem., Vol. 278, Issue 28, 25990-25997, July 11, 2003
Structure-based Inhibitor Discovery against Adenylyl Cyclase Toxins from Pathogenic Bacteria That Cause Anthrax and Whooping Cough*
Sandriyana Soelaiman
,
Binqing Q. Wei
¶,
Pamela Bergson
,
Young-Sam Lee ||,
Yuequan Shen
,
Milan Mrksich ||,
Brian K. Shoichet ** 
and
Wei-Jen Tang

From the
Ben-May Institute for Cancer Research,
The University of Chicago, Chicago, Illinois 60637, the
¶Department of Molecular Pharmacology and
Biological Chemistry, Northwestern University Medical School, Chicago,
Illinois 60611, the ||Department of Chemistry, The
University of Chicago, Chicago, Illinois 60637, and the
**Department of Pharmaceutical Chemistry, University
of California, San Francisco, California 94143
Edema factor (EF) and CyaA are adenylyl cyclase toxins secreted by
pathogenic bacteria that cause anthrax and whooping cough, respectively. Using
the structure of the catalytic site of EF, we screened a data base of
commercially available, small molecular weight chemicals for those that could
specifically inhibit adenylyl cyclase activity of EF. From 24 compounds
tested, we have identified one quinazoline compound, ethyl
5-aminopyrazolo[1,5-a]quinazoline-3-carboxylate, that specifically
inhibits adenylyl cyclase activity of EF and CyaA with
20
µM Ki. This compound neither
affects the activity of host resident adenylyl cyclases type I, II, and V nor
exhibits promiscuous inhibition. The compound is a competitive inhibitor,
consistent with the prediction that it binds to the adenine portion of the ATP
binding site on EF. EF is activated by the host calcium sensor, calmodulin.
Surface plasmon resonance spectroscopic analysis shows that this compound does
not affect the binding of calmodulin to EF. This compound is dissimilar from a
previously described, non-nucleoside inhibitor of host adenylyl cyclase. It
may serve as a lead to design antitoxins to address the role of adenylyl
cyclase toxins in bacterial pathogenesis and to fight against anthrax and
whooping cough.
Received for publication, February 4, 2003
, and in revised form, March 25, 2003.
* This research was supported by National Institutes of Health Grants GM62548
and GM53459, and an American Heart Association Established Investigator Award
(to W.-J. T.), National Institutes of Health Grant 59957 (to B. K. S.), and
Defense Advanced Research Projects Agency Grant N00173-01-G010 and National
Science Foundation Grant DMR-9808595 (to M. M.). The costs of publication of
this article were defrayed in part by the payment of page charges. This
article must therefore be hereby marked "advertisement"
in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Both authors contributed equally to this work.

To whom correspondence may be addressed: Dept. of Pharmaceutical Chemistry,
University of California, Genentech Hall, 600 16th St., San Francisco, CA
94143. E-mail:
shoichet{at}cgl.ucsf.edu.

To whom correspondence may be addressed: Ben-May Inst. for Cancer Research,
The University of Chicago, 924 East 57th St., Chicago, IL 60637. E-mail:
wtang{at}midway.uchicago.edu.

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