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J. Biol. Chem., Vol. 278, Issue 33, 31067-31077, August 15, 2003
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1(XXVII)) with a Unique Expression Pattern and Unusual Molecular Characteristics Establishes a New Clade within the Vertebrate Fibrillar Collagen Family*

¶
||
From the
Wellcome Trust Centre for Cell-Matrix
Research, School of Biological Sciences, University of Manchester, Manchester
M13 9PT, United Kingdom and the **Histopathology Unit,
Cancer Research UK, 44 Lincoln's Inn Fields, London WC2A 3PX, United
Kingdom
The type XXVII collagen gene codes for a novel vertebrate fibrillar
collagen that is highly conserved in man, mouse, and fish (Fugu
rubripes). The pro
1(XXVII) chain has a domain structure similar to
that of the type B clade chains (
1(V),
3(V),
1(XI), and
2(XI)). However, compared with other vertebrate fibrillar collagens
(types I, II, III, V, and XI), type XXVII collagen has unusual molecular
features such as no minor helical domain, a major helical domain that is short
and interrupted, and a short chain selection sequence within the NC1 domain.
Pro
1(XXVII) mRNA is 9 kb and expressed by chondrocytes but also by a
variety of epithelial cell layers in developing tissues including stomach,
lung, gonad, skin, cochlear, and tooth. By Western blotting, type XXVII
antisera recognized multiple bands of 240110 kDa in tissue extracts and
collagenous bands of 150140 kDa in the conditioned medium of the
differentiating chondrogenic ATDC5 cell line. Phylogenetic analyses revealed
that type XXVII, together with the closely related type XXIV collagen gene,
form a new, third clade (type C) within the vertebrate fibrillar collagen
family. Furthermore, the exon structure of the type XXVII collagen gene is
similar to, but distinct from, those of the genes coding for the type A or B
clade pro
chains.
Received for publication, December 18, 2002 , and in revised form, May 22, 2003.
Note Added in ProofWhile this paper was under review, the paper by Pace et al. (25) on collagen XXVII was published.
* The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
¶ Supported by Biotechnology and Biological Sciences Research Council. Present address: Bioinformatics Group, F2G Limited, The Manchester Incubator Building, Grafton St., Manchester M13 9XX, UK.
|| Supported by a Medical Research Council Ph.D. studentship.
Recipient of a Wellcome Trust Research Leave Award. To whom correspondence
should be addressed: Wellcome Trust Centre for Cell-Matrix Research, 2.205
Stopford, School of Biological Sciences, University of Manchester, Manchester
M13 9PT, UK. Fax: 161-275-5082; E-mail:
ray.boot-handford{at}man.ac.uk.
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