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Originally published In Press as doi:10.1074/jbc.M307362200 on September 22, 2003

J. Biol. Chem., Vol. 278, Issue 49, 48965-48972, December 5, 2003
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Defining the Regions of Escherichia coli YidC That Contribute to Activity*

Fenglei Jiang{ddagger}, Minyong Chen{ddagger}, Liang Yi{ddagger}, Jan-Willem de Gier§, Andreas Kuhn¶, and Ross E. Dalbey{ddagger}||

From the {ddagger}Department of Chemistry, Ohio State University, Columbus, Ohio 43210, the §Department of Biochemistry and Biophysics, Arrhenius Laboratory, Stockholm University, S-106 91 Stockholm, Sweden, and the Institute for Microbiology and Molecular Biology, University of Hohenheim, Garbenstrasse 30, D-70599 Stuttgart, Germany

The YidC/Oxa1/Alb3 family of proteins catalyzes membrane protein insertion in bacteria, mitochondria, and chloroplasts. In this study, we investigated which regions of the bacterial YidC protein are important for its function in membrane protein biogenesis. In Escherichia coli, YidC spans the membrane six times, with a large 319-residue periplasmic domain following the first transmembrane domain. We found that this large periplasmic domain is not required for YidC function and that the residues in the exposed hydrophilic loops or C-terminal tail are not critical for YidC activity. Rather, the five C-terminal transmembrane segments that contain the three consensus sequences in the YidC/Oxa1/Alb3 family are important for its function. However, by systematically replacing all the residues in transmembrane segment (TM) 2, TM3, and TM6 with serine and by swapping TM4 and TM5 with unrelated transmembrane segments, we show that the precise sequence of these transmembrane regions is not essential for in vivo YidC activity. Single serine mutations in TM2, TM3, and TM6 impaired the membrane insertion of the Sec-independent procoat-leader peptidase protein. We propose that the five C-terminal transmembrane segments of YidC function as a platform for the translocating substrate protein to support its insertion into the membrane.


Received for publication, July 9, 2003 , and in revised form, September 22, 2003.

* This work was supported by National Institutes of Health Grant GM63862 (to R. E. D.), by Deutsche Forschungsgemeinschaft Grant Ku 749/3-1 (to A. K.), and by a Swedish Research Council grant (to J.-W. d. G.). The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

|| To whom correspondence should be addressed: Dept. of Chemistry, Ohio State University, 100 W. 18th Ave., Columbus, OH 43210. Tel.: 614-292-2384; Fax: 614-292-1532; E-mail: dalbey{at}chemistry.ohio-state.edu.


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