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J. Biol. Chem., Vol. 279, Issue 21, 22490-22497, May 21, 2004
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From the Institute of Molecular Biology and Biotechnology, Foundation of Research and Technology and Department of Biology, University of Crete, P. O. Box 1527, GR-71110 Iraklio, Crete, Greece
SecA, the dimeric ATPase subunit of protein translocase, contains a DEAD helicase catalytic core that binds to a regulatory C-terminal domain. We now demonstrate that IRA1, a conserved helix-loop-helix structure in the C-domain, controls C-domain conformation through direct interdomain contacts. C-domain conformational changes are transmitted to the DEAD motor and alter its conformation. These interactions establish DEAD motor/C-domain conformational cross-talk that requires a functional IRA1. IRA1-controlled binding/release cycles of the C-domain to the DEAD motor couple this cross-talk to protein translocation chemistries, i.e. DEAD motor affinities for ligands (nucleotides, preprotein signal peptides, and SecYEG, the integral membrane component of translocase) and ATP turnover. IRA1-mediated global co-ordination of SecA catalysis is essential for protein translocation.
Received for publication, January 29, 2004 , and in revised form, March 4, 2004.
This paper is dedicated to the memory of Bob Macnab.
* This work was supported by European Union Grants TMR-ERBFMRXCT960035, Biotech2-BIO4-CT98-0051, RTN1-1999-00149, QLK3-CT-2000-00082, and QLRT-2000-00122 and by a grant from Pfizer, Inc. The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
To whom correspondence should be addressed. Tel./Fax: 30-2810-391166; E-mail: aeconomo{at}imbb.forth.gr.
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