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J. Biol. Chem., Vol. 279, Issue 21, 22759-22764, May 21, 2004
Three-dimensional Organization of the Archaeal A1-ATPase from Methanosarcina mazei Gö1*![]() ![]() ![]() **
From the
A modified isolation procedure provides a homogeneous A1-ATPase from the archaeon Methanosarcina mazei Gö1, containing the five subunits in stoichiometric amounts of A3:B3:C:D:F. A1 obtained in this way was characterized by three-dimensional electron microscopy of single particles, resulting in the first three-dimensional reconstruction of an A1-ATPase at a resolution of 3.2 nm. The A1 consists of a headpiece of 10.2 nm in diameter and 10.8 nm in height, formed by the six elongated subunits A3 and B3. At the bottom of the A3B3 complex, a stalk of 3.0 nm in length can be seen. The A3B3 domain surrounds a large cavity that extends throughout the length of the A3B3 barrel. A part of the stalk penetrates inside this cavity and is displaced toward an A-B-A triplet. To investigate further the topology of the stalk subunits C-F in A1, cross-linking has been carried out by using dithiobis[sulfosuccinimidylpropionate] (DSP) and 1-ethyl-3-(dimethylaminopropyl)-carbodiimide (EDC). In experiments where DSP was added the cross-linked products B-F, Ax-D, A-B-D, and Ax-Bx-D were formed. Subunits B-F, A-D, A-B-D, and A-B-C-D could be cross-linked by EDC. The subunit-subunit interaction in the presence of DSP was also studied as a function of nucleotide binding, demonstrating movements of subunits C, D, and F during ATP cleavage. Finally, the three-dimensional organization of this A1 complex is discussed in terms of the relationship to the F1- and V1-ATPases at a resolution of 3.2 nm.
Received for publication, December 16, 2003 , and in revised form, February 20, 2004. * This work was supported by Grant GR 1475/9-1, 9-2 from the Deutsche Forschungsgemeinschaft. The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact. || Present address: Johann Wolfgang Goethe-Universität Frankfurt, Institut für Mikrobiologie, D-60439 Frankfurt, Germany. ** To whom correspondence should be addressed: Universität des Saarlandes, Fachrichtung 2.5-Biophysik, Universitätsbau 76, D-66421 Homburg, Germany. Tel.: 49-6841-162-6085; Fax: 49-6841-162-6086; E-mail: ggrueber{at}uniklinik-saarland.de.
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