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J. Biol. Chem., Vol. 280, Issue 1, 244-252, January 7, 2005
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B*

From the Division of Neurobiology, Department of Neurology and Neuroscience, Weill Medical College of Cornell University, New York, New York 10021
Phosphorylation of nuclear factor-
B (NF-
B) subunits emerges as a mechanism by which transcriptional activity of nuclear NF-
B complexes is regulated in an inhibitor
B-independent fashion. As the main transactivator, the p65 subunit of NF-
B has an outstanding position in the hierarchy of NF-
B proteins. p65 is a multiply phosphorylated protein with phosphorylation sites in the C-terminal transactivation domain and the N-terminal Rel homology domain (RHD). In this study, we describe two previously non-reported phospho-acceptor sites within the p65 RHD. We show that differential phosphorylation of serine residues within the RHD modulates transcriptional activity in a cis-acting element and promoter-specific context, thus leading to a phosphorylation state-dependent gene expression profile. RelA-/- mouse embryonic fibroblasts reconstituted with wild-type p65 or p65 phosphorylation-deficient mutants showed a distinctive expression profile of synthetic
B-dependent reporters as well as endogenous genes. Hypophosphorylated p65 did not display cis-acting element-specific changes in DNA binding or dimerization behavior. This study shows for the first time that site-specific phosphorylation can target a transcription factor to a particular subset of genes.
Received for publication, August 16, 2004 , and in revised form, October 12, 2004.
* This work was supported by National Institute of Health Grant HL59476 (to J. A.). The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
To whom correspondence should be addressed: 411 East 69th St., Rm. KB410, New York, NY 10021. E-mail: joa2006{at}med.cornell.edu.
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