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J. Biol. Chem., Vol. 280, Issue 4, 2981-2989, January 28, 2005
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From the Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, Katahira, Aoba, Sendai 980-8577, Japan
Heme oxygenases found in mammals, plants, and bacteria catalyze degradation of heme using the same mechanism. Roles of distal Asp (Asp-136) residue in HmuO, a heme oxygenase of Corynebacterium diphtheriae, have been investigated by site-directed mutagenesis, enzyme kinetics, resonance Raman spectroscopy, and x-ray crystallography. Replacements of the Asp-136 by Ala and Phe resulted in reduced heme degradation activity due to the formation of ferryl heme, showing that the distal Asp is critical in HmuO heme oxygenase activity. D136N HmuO catalyzed heme degradation at a similar efficiency to wild type and D136E HmuO, implying that the carboxylate moiety is not required for the heme catabolism by HmuO. Resonance Raman results suggest that the inactive ferryl heme formation in the HmuO mutants is induced by disruption of the interaction between a reactive FeOOH species and an adjacent distal pocket water molecule. Crystal structural analysis of the HmuO mutants confirms partial disappearance of this nearby water in D136A HmuO. Our results provide the first experimental evidence for the catalytic importance of the nearby water molecule that can be universally critical in heme oxygenase catalysis and propose that the distal Asp helps in positioning the key water molecule at a position suitable for efficient activation of the FeOOH species.
Received for publication, September 7, 2004 , and in revised form, October 28, 2004.
The atomic coordinates and structure factors (codes 1WNX (D136E), 1WNV (D136A), and 1WNW (D136N)) have been deposited in the Protein Data Bank, Research Collaboratory for Structural Bioinformatics, Rutgers University, New Brunswick, NJ (http://www.rcsb.org/).
* This work was supported in part by Grants-in-aid from Ministry of Education, Science, Culture, and Sports of Japan 12147201, 14380300, 16370056, and 16659114 (to M. I.-S.), 14740358 (to T. M.), and 15770095 (to M. U.) and a grant from Takeda Science Foundation (to M. I.-S.). The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Present address: Laboratory of Metabolism, NCI, National Institutes of Health, Bethesda, MD 20892.
To whom correspondence may be addressed. E-mail: matsui{at}tagen.tohoku.ac.jp. ¶ To whom correspondence may be addressed. E-mail: mis2{at}tagen.tohoku.ac.jp.
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