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Originally published In Press as doi:10.1074/jbc.M509489200 on October 20, 2005

J. Biol. Chem., Vol. 280, Issue 51, 41819-41826, December 23, 2005
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An Unusual, His-dependent Family I Pyrophosphatase from Mycobacterium tuberculosis*

Marko Tammenkoski{ddagger}, Stefano Benini§, Natalia N. Magretova¶, Alexander A. Baykov¶1, and Reijo Lahti{ddagger}2

From the {ddagger}Department of Biochemistry, University of Turku, FIN-20014 Turku, Finland, the §University of York, Heslington, York YO10 5YW, United Kingdom, and the A. N. Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow 119899, Russia

Soluble inorganic pyrophosphatases (PPases) comprise two evolutionarily unrelated families (I and II). These two families have different specificities for metal cofactors, which is thought to be because of the fact that family II PPases have three active site histidines, whereas family I PPases have none. Here, we report the structural and functional characterization of a unique family I PPase from Mycobacterium tuberculosis (mtPPase) that has two His residues (His21 and His86) in the active site. The 1.3-Å three-dimensional structure of mtPPase shows that His86 directly interacts with bound sulfate, which mimics the product phosphate. Otherwise, mtPPase is structurally very similar to the well studied family I hexameric PPase from Escherichia coli, although mtPPase lacks the intersubunit metal binding site found in E. coli PPase. The cofactor specificity of mtPPase resembles that of E. coli PPase in that it has high activity in the presence of Mg2+, but it differs from the E. coli enzyme and family II PPases because it has much lower activity in the presence of Mn2+ or Zn2+. Replacements of His21 and His86 in mtPPase with the residues found in the corresponding positions of E. coli PPase had either no effect on the Mg2+- and Mn2+-supported reactions (H86K) or reduced Mg2+-supported activity (H21K). However, both replacements markedly increased the Zn2+-supported activity of mtPPase (up to 11-fold). In the double mutant, Zn2+ was a 2.5-fold better cofactor than Mg2+. These results show that the His residues in mtPPase are not essential for catalysis, although they determine cofactor specificity.


Received for publication, August 29, 2005 , and in revised form, October 7, 2005.

* This work was supported by Academy of Finland Grant 201611, a grant for the National Graduate School in Informational and Structural Biology from the Ministry of Education and the Academy of Finland, European Community contract QLK2CT2001-02018 (Structural and functional genomics of M. tuberculosis), Russian Foundation for Basic Research Grant 03-04-48798, and Ministry of Industry, Science, and Technologies of the Russian Federation Grant 1706-2003-4. The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

1 To whom correspondence may be addressed. Tel.: 7-095-939-5541; Fax: 7-095-939-3181; E-mail: baykov{at}genebee.msu.su. 2 To whom correspondence may be addressed. Tel.: 358-2-333-6845; Fax: 358-2-333-6860; E-mail: reijo.lahti{at}utu.fi.


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