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J. Biol. Chem., Vol. 281, Issue 25, 17238-17245, June 23, 2006
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1
1
¶2
From the
Department of Biochemistry,
Department of Chemistry, and the ¶Plant Science Initiative, University of Nebraska, Lincoln, Nebraska 68588-0664
Phosphoenolpyruvate carboxylase (PEPC) is a "multifaceted," allosteric enzyme involved in C4 acid metabolism in green plants/microalgae and prokaryotes. Before the elucidation of the three-dimensional structures of maize C4 leaf and Escherichia coli PEPC, our truncation analysis of the sorghum C4 homologue revealed important roles for the enzyme's C-terminal
-helix and its appended QNTG961 tetrapeptide in polypeptide stability and overall catalysis, respectively. Collectively, these functional and structural observations implicate the importance of the PEPC C-terminal tetrapeptide for both catalysis and negative allosteric regulation. We have now more finely dissected this element of PEPC structure-function by modification of the absolutely conserved C-terminal glycine of the sorghum C4 isoform by site-specific mutagenesis (G961(A/V/D)) and truncation (
C1/C4). Although the C4 polypeptide failed to accumulate in a PEPC- strain (XH11) of E. coli transformed with the Asp mutant, the other variants were produced at wild-type levels. Although neither of these four mutants displayed an apparent destabilization of the purified PEPC homotetramer, all were compromised catalytically in vivo and in vitro. Functional complementation of XH11 cells under selective growth conditions was restricted progressively by the Ala,
C1 and Val, and
C4 modifications. Likewise, steady-state kinetic analysis of the purified mutant enzymes revealed corresponding negative trends in kcat and kcat/K0.5 (phosphoenolpyruvate) but not in K0.5 or the Hill coefficient. Homology modeling of these sorghum C-terminal variants against the structure of the closely related maize C4 isoform predicted perturbations in active-site molecular cavities and/or ion-pairing with essential, invariant Arg-638. These collective observations reveal that even a modest, neutral alteration of the PEPC C-terminal hydrogen atom side chain is detrimental to enzyme function.
Received for publication, March 10, 2006 , and in revised form, April 18, 2006.
* This research was supported in part by United States National Science Foundation Grant MCB-0130057 (to R. C.) and was published as No. 15,172 in the University of Nebraska Agricultural Research Division journal series. The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
1 These researchers contributed equally to this project and, thus, should be considered as joint first-authors.
2 To whom correspondence should be addressed: Dept. of Biochemistry, University of Nebraska-Lincoln, N246 Beadle Center, Lincoln, Nebraska 68588-0664. Tel.: 402-472-2936; Fax: 402-472-7842; E-mail: rchollet1{at}unl.edu.
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