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Originally published In Press as doi:10.1074/jbc.M508696200 on December 8, 2005

J. Biol. Chem., Vol. 281, Issue 6, 3633-3641, February 10, 2006
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Vitamin B6 Biosynthesis by the Malaria Parasite Plasmodium falciparum

BIOCHEMICAL AND STRUCTURAL INSIGHTS*Formula

Martin Gengenbacher{ddagger}, Teresa B. Fitzpatrick§, Thomas Raschle§1, Karlheinz Flicker, Irmgard Sinning||, Sylke Müller**2, Peter Macheroux3, Ivo Tews||4, and Barbara Kappes{ddagger}5

From the {ddagger}Abteilung für Parasitologie, Universitätsklinikum Heidelberg, Im Neuenheimer Feld 324, D-69120 Heidelberg, Germany, the §eidgenössische Technische Hochschule Zürich, Institut für Pflanzenwissenschaften, Universitätsstrasse 2, CH-8092 Zürich, Switzerland, the Technische Universität Graz, Institut für Biochemie, Petersgasse 12, A-8010 Graz, Austria, the ||Department of Structural Biology, Biochemiezentrum der Universität Heidelberg, Im Neuenheimer Feld 328, D-69120 Heidelberg, Germany, and the **Institute of Biomedical and Life Sciences, Division of Infection and Immunity, University of Glasgow, Glasgow G12 8QQ, Scotland, United Kingdom

Vitamin B6 is one of nature's most versatile cofactors. Most organisms synthesize vitamin B6 via a recently discovered pathway employing the proteins Pdx1 and Pdx2. Here we present an in-depth characterization of the respective orthologs from the malaria parasite, Plasmodium falciparum. Expression profiling of Pdx1 and -2 shows that blood-stage parasites indeed possess a functional vitamin B6 de novo biosynthesis. Recombinant Pdx1 and Pdx2 form a complex that functions as a glutamine amidotransferase with Pdx2 as the glutaminase and Pdx1 as pyridoxal-5 '-phosphate synthase domain. Complex formation is required for catalytic activity of either domain. Pdx1 forms a chimeric bi-enzyme with the bacterial YaaE, a Pdx2 ortholog, both in vivo and in vitro, although this chimera does not attain full catalytic activity, emphasizing that species-specific structural features govern the interaction between the protein partners of the PLP synthase complexes in different organisms. To gain insight into the activation mechanism of the parasite bi-enzyme complex, the three-dimensional structure of Pdx2 was determined at 1.62 Å. The obstruction of the oxyanion hole indicates that Pdx2 is in a resting state and that activation occurs upon Pdx1-Pdx2 complex formation.


Received for publication, August 8, 2005 , and in revised form, November 17, 2005.

The nucleotide sequence(s) reported in this paper has been submitted to the GenBankTM/EBI Data Bank with accession number(s) DQ077732 [GenBank] .

The atomic coordinates and structure factors (code 2ABW) have been deposited in the Protein Data Bank, Research Collaboratory for Structural Bioinformatics, Rutgers University, New Brunswick, NJ (http://www.rcsb.org/).

* This work was supported in part by the European Commission (Grant VITBIOMAL-012158). Data collection was performed at beamline ID29 (ESRF, Grenoble). The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

Formula The on-line version of this article (available at http://www.jbc.org) contains supplemental Figs. S1-S3.

1 Supported by the Swiss National Science Foundation (Grant 3100A0-107975).

2 A Wellcome Trust Senior Fellow.

3 Thanks the Austrian Fonds zur Förderung der wissenschaftlichen Forschung for generous financial support (Grant FWF 17215).

4 To whom correspondence may be addressed. Tel.: 49-6221-544788; Fax: 49-6221-544790; E-mail: ivo.tews{at}bzh.uni-heidelberg.de.

5 To whom correspondence may be addressed. Tel.: 49-6221-561774; Fax: 49-6221-564643; E-mail: barbara.kappes{at}urz.uni-heidelberg.de.


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