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Originally published In Press as doi:10.1074/jbc.M611345200 on April 11, 2007

J. Biol. Chem., Vol. 282, Issue 23, 16736-16743, June 8, 2007
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Phosphatidylethanolamine, a Limiting Factor of Autophagy in Yeast Strains Bearing a Defect in the Carboxypeptidase Y Pathway of Vacuolar Targeting*

Ruth Nebauer, Sabine Rosenberger, and Günther Daum1

From the Institute of Biochemistry, Graz University of Technology, Petersgasse 12/2, A-8010 Graz, Austria

Vps4p and Vps36p of Saccharomyces cerevisiae are involved in the transport of proteins to the vacuole via the carboxypeptidase Y pathway. We found that deletion of VPS4 and VPS36 caused impaired maturation of the vacuolar proaminopeptidase I (pAPI) via autophagy or the cytosol to vacuole targeting pathway. Supplementation with ethanolamine rescued this defect, leading to an increase of the cellular amount of phosphatidylethanolamine (PtdEtn), an enhanced level of the PtdEtn-binding autophagy protein Atg8p and a balanced rate of autophagy. We also discovered that maturation of pAPI was generally affected by PtdEtn depletion in a psd1{Delta} psd2{Delta} mutant due to reduced recruitment of Atg8p to the preautophagosomal structure. Ethanolamine supplementation provided the necessary amounts of PtdEtn for complete maturation of pAPI. Since the expression level of Atg8p was not compromised in the psd1{Delta} psd2{Delta} strain, we concluded that the amount of available PtdEtn was limiting. Thus, PtdEtn appears to be a limiting factor for the balance of the carboxypeptidase Y pathway and autophagy/the cytosol to vacuole targeting pathway in the yeast.


Received for publication, December 11, 2006 , and in revised form, March 30, 2007.

* This work was supported by the Fonds zur Förderung der Wissenschaftlichen Forschung in Österreich Project 17321 (to G. D.). The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

1 To whom correspondence should be addressed: Institute of Biochemistry, Graz University of Technology, Petersgasse 12/2, A-8010 Graz, Austria. Tel.: 43-316-873-6462; Fax: 43-316-873-6952; E-mail: guenther.daum{at}tugraz.at.


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