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Originally published In Press as doi:10.1074/jbc.M705554200 on September 7, 2007
J. Biol. Chem., Vol. 282, Issue 44, 31909-31919, November 2, 2007
SufR Coordinates Two [4Fe-4S]2+, 1+ Clusters and Functions as a Transcriptional Repressor of the sufBCDS Operon and an Autoregulator of sufR in Cyanobacteria*
Gaozhong Shen ,
Ramakrishnan Balasubramanian ,
Tao Wang ,
Yingxian Wu ,
Lee M. Hoffart ,
Carsten Krebs ,
Donald A. Bryant , and
John H. Golbeck 1
From the
Departments of Biochemistry and Molecular Biology and Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802
The sufR gene encodes a protein that functions as a transcriptional repressor of the suf regulon in cyanobacteria. It is predicted to contain an N-terminal helix loop helix DNA binding motif and a C-terminal Fe/S binding domain. Through immunoblotting assays of cell extracts, the sufR product in Synechocystis sp. PCC 6803 was shown to have a mass of 25 kDa. This indicates that the second ATG in the open reading frame is the correct start codon and that sufR encodes a protein of 216 amino acids (SufR216) rather than the originally predicted 240 amino acids. Recombinant SufR harbored [4Fe-4S]2+, 1+ 216 clusters, which were present in a mixture of S = 1/2 and 3/2 ground spin states, and the holoprotein was a homodimer, containing 3.7 of non-heme irons and 3.5 labile sulfides per monomer. Thus, two [4Fe-4S]2+, 1+ clusters are coordinated by each SufR216 homodimer. SufR216 bound to two DNA sequences in the regulatory region between the divergently transcribed sufR gene and the sufBCDS operon, and its binding affinity depended on the presence and redox state of the [4Fe-4S]2+, 1+ clusters. A high affinity binding site, which controls sufBCDS expression, and a low affinity binding site, which controls sufR expression, were identified. The SufR binding sites, which are separated by 26 base pairs, each contain a perfect inverted repeat, CAAC-N6-GTTG, and are highly conserved in cyanobacteria. The Fe/S protein SufR thus functions both as a transcriptional repressor of the sufBCDS operon and as an autoregulator of sufR.
Received for publication, July 6, 2007
, and in revised form, September 5, 2007.
* This work was supported by United States Department of Agriculture contract 2005-35318-15284 (to J. H. G. and D. A. B.), National Science Foundation Grant MCB-0077586 (to D. A. B. and J. H. G.), and "Center for the Study of Biometals in Health and Disease" Grant 417-12HY TSF (to C. K.). This project was also funded, in part, under a grant with the Pennsylvania Department of Health using Tobacco Settlement Funds. The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement"in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
1 To whom correspondence should be addressed: 310S Frear Bldg., The Pennsylvania State University, University Park, PA 16802. Tel.: 814-865-1163; Fax: 814-863-7024; E-mail: jhg5{at}psu.edu.

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Copyright © 2007 by the American Society for Biochemistry and Molecular Biology.
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