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Originally published In Press as doi:10.1074/jbc.M801238200 on April 22, 2008

J. Biol. Chem., Vol. 283, Issue 25, 17075-17082, June 20, 2008
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Role for DNA Polymerase {kappa} in the Processing of N2-N2-Guanine Interstrand Cross-links*Formula

Irina G. Minko{ddagger}1, Michael B. Harbut{ddagger}12, Ivan D. Kozekov§, Albena Kozekova§, Petra M. Jakobs, Susan B. Olson, Robb E. Moses, Thomas M. Harris§, Carmelo J. Rizzo§, and R. Stephen Lloyd{ddagger}3

From the {ddagger}Center for Research on Occupational and Environmental Toxicology and Department of Molecular and Medical Genetics, Oregon Health & Science University, Portland, Oregon 97239 and the §Department of Chemistry, Center in Molecular Toxicology, Vanderbilt University, Nashville, Tennessee 37235

Although there exists compelling genetic evidence for a homologous recombination-independent pathway for repair of interstrand cross-links (ICLs) involving translesion synthesis (TLS), biochemical support for this model is lacking. To identify DNA polymerases that may function in TLS past ICLs, oligodeoxynucleotides were synthesized containing site-specific ICLs in which the linkage was between N2-guanines, similar to cross-links formed by mitomycin C and enals. Here, data are presented that mammalian cell replication of DNAs containing these lesions was ~97% accurate. Using a series of oligodeoxynucleotides that mimic potential intermediates in ICL repair, we demonstrate that human polymerase (pol) {kappa} not only catalyzed accurate incorporation opposite the cross-linked guanine but also replicated beyond the lesion, thus providing the first biochemical evidence for TLS past an ICL. The efficiency of TLS was greatly enhanced by truncation of both the 5 ' and 3 ' ends of the nontemplating strand. Further analyses showed that although yeast Rev1 could incorporate a dCTP opposite the cross-linked guanine, no evidence was found for TLS by pol {zeta} or a pol {zeta}/Rev1 combination. Because pol {kappa} was able to bypass these ICLs, biological evidence for a role for pol {kappa} in tolerating the N2-N2-guanine ICLs was sought; both cell survival and chromosomal stability were adversely affected in pol {kappa}-depleted cells following mitomycin C exposure. Thus, biochemical data and cellular studies both suggest a role for pol {kappa} in the processing of N2-N2-guanine ICLs.


Received for publication, February 14, 2008 , and in revised form, April 14, 2008.

* This work was supported, in whole or in part, by National Institutes of Health Grant ES 05355 and Center Grant ES 000267. The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

Formula The on-line version of this article (available at http://www.jbc.org) contains supplemental Methods, additional references, Table 1, and Fig. 1.

1 Both authors contributed equally to this work.

2 Present address: Graduate Group in Pharmacological Sciences, University of Pennsylvania, Philadelphia, PA 19104.

3 To whom correspondence should be addressed: Center for Research on Occupational and Environmental Toxicology, Oregon Health and Science University, L606, 3181 SW Sam Jackson Park Rd., Portland, OR 97239. Tel.: 503-494-9957; Fax: 503-494-6831; E-mail: lloydst{at}ohsu.edu.


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