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A more recent version of this article appeared on June 1, 2001
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M100265200v1
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Papers In Press, published online ahead of print February 20, 2001
J. Biol. Chem, 10.1074/jbc.M100265200
Submitted on January 11, 2001
Revised on February 12, 2001
Accepted on February 20, 2001

Chromatin structure of the dual c-myc promoters P1/P2 is regulated by separate elements

Thomas Albert, Julie Wells, Jens-Oliver Funk, Andrea Pullner, Eva-Elizabeth Raschke, Gertraud Stelzer, Michael Meisterernst, Peggy J. Farnham, and Dirk Eick

Institute of Clinical Molecular Biology and Tumor Genetics, GSF Research Centre, D-81377, Munich

Corresponding Author: eick{at}gsf.de

The proto-oncogene c-myc is transcribed from a dual promoter P1/P2, with transcription initiation sites 160 bp apart. Here we have studied the transcriptional activation of both promoters on chromatin templates. C-myc chromatin was reconstituted on stably transfected, episomal, Epstein-Barr virus-derived vectors in a B cell line. Episomal P1 and P2 promoters showed only basal activity but were strongly inducible by histone deacetylase inhibitors. The effect of promoter mutations on c-myc activity, chromatin structure, and E2F binding was studied. The ME1a1 binding site between P1 and P2 was required for the maintenance of an open chromatin configuration of the dual c-myc promoters. Mutation of this site strongly reduced the sensitivity of the core promoter region of P1/P2 to micrococcal nuclease and prevented binding of pol II at the P2 promoter. In contrast, mutation of the P2 TATA box also abolished binding of pol II at the P2 promoter but did not affect the chromatin structure of the P1/P2 core promoter region. The E2F binding site adjacent to ME1a1 is required for repression of the P2 promoter, but not the P1 promoter, likely by recruitment of histone deacetylase activity. Chromatin precipitation experiments with E2F-specific antibodies revealed binding of E2F-1, E2F-2, and E2F-4 to the E2F site of the c-myc promoter in vivo, if the E2F site was intact. Taken together, the analyses support a model with a functional hierarchy for regulatory elements in the c-myc promoter region: binding of proteins to the ME1a1 site provides a nucleosome-free region of chromatin near the P2 start site, binding of E2F results in transcriptional repression without affecting polymerase recruitment, and the TATA box is required for polymerase recruitment.


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