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A more recent version of this article appeared on December 30, 2005
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Papers In Press, published online ahead of print October 4, 2005
J. Biol. Chem, 10.1074/jbc.M506348200
Submitted on June 10, 2005
Revised on September 29, 2005
Accepted on October 3, 2005

p53 monitors replication fork regression by binding to "Chickenfoot" intermediates

Deepa Subramanian and Jack D. Griffith

Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599

Corresponding Author: dsubramanian{at}athenixcorp.com

The tumor suppressor protein, p53, utilizes multiple mechanisms to ensure faithful transmission of the genome including regulation of DNA replication, repair and recombination. Monitoring these pathways may involve direct binding of p53 to the DNA intermediates of these processes. In this study, we generated templates resembling stalled replication forks and utilized electron microscopy to examine p53 interactions with these substrates. Our results show that p53 binds with high affinity to the junction of stalled forks whereas two cancer-derived p53 mutants showed weak binding. Additionally, some of the templates were re-arranged to form “chickenfoot” structures in the presence of p53. These were mostly formed due to p53 trapping intermediates of spontaneous fork regression, however, in a small population, the protein appears to be promoting their formation. Collectively, these results demonstrate the importance of sequence-independent binding in p53 mediated maintenance of genomic integrity.


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