Papers In Press, published online ahead of print April 11, 2007
J. Biol. Chem, 10.1074/jbc.M611392200
Submitted on December 12, 2006
Accepted on April 11, 2007
RNA-Binding independent dimerization of ADAR and dominant negative effects of nonfunctional subunits on dimer functions
Louis Valente and Kazuko Nishikura
The Wistar Institute, Philadelphia, PA 19104
Corresponding Author: kazuko{at}wistar.org
RNA editing that converts adenosine to inosine in double-stranded RNA (dsRNA) are mediated by Adenosine Deaminases Acting on RNA (ADAR). ADAR1 and ADAR2 form respective homodimers and this association is essential for their enzymatic activities. In this investigation, we set out experiments aiming to determine whether formation of the homodimer complex is mediated by an amino acid interface made through protein:protein interactions of two monomers or via binding of the two subunits to a dsRNA substrate. Point mutations were created in the dsRNA-binding domains (dsRBDs) that abolished all RNA binding, as tested for two classes of ADAR ligands; long and short dsRNA. The mutant ADAR dimer complexes are intact, as demonstrated by their ability to co-purify in a sequential affinity tagged purification and also by their elution at the dimeric fraction position on a size fractionation column. Our results demonstrate ADAR dimerization-independent of their binding to dsRNA, establishing the importance of protein:protein interactions for dimer formation. As expected these mutant ADARs could no longer perform their catalytic function due to the loss in substrate binding. Surprisingly, a chimeric dimer consisting of one RNA-binding mutant monomer and a wildtype partner still abolished its ability to bind and edit its substrate, indicating that ADAR dimers require two subunits with functional dsRBDs for binding to a dsRNA substrate and then for editing activity to occur.