|
Volume 270,
Number 3,
Issue of January 20, 1995 pp. 1350-1361
©1995 by The American Society for Biochemistry and Molecular Biology, Inc.
The
Human Low Affinity Immunoglobulin G Fc Receptor III-A and III-B Genes
MOLECULAR CHARACTERIZATION OF THE PROMOTER REGIONS (*)
(Received for publication, August 18, 1994)
J. Engelbert
Gessner (§), ,
Thomas
Grussenmeyer ,
Waldemar
Kolanus
(1),
Reinhold
E.
Schmidt (¶)
From the Department of Immunology, Hannover Medical School,
Konstanty-Gutschowstrasse 8, 30625 Hannover, Federal Republic of
Germany Laboratory of Molecular Biology, Genzentrum of
Ludwig-Maximilian-University, Am Klopferspitz 18A, 82152 Martinsried,
Federal Republic of Germany
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
REFERENCES
ABSTRACT
The human Fc receptor with low affinity for IgG (Fc RIII,
CD16) is encoded by two nearly identical genes, Fc RIII-A and
Fc RIII-B, resulting in tissue-specific expression of alternative
membrane-anchored isoforms. The transmembrane CD16 receptor forms a
heteromeric structure with the Fc RI ( ) and/or CD3 ( )
subunits on the surface of activated monocytes/macrophages, NK cells,
and a subset of T cells. The expression of the
glycosylphosphatidylinositol-anchored CD16 isoform encoded by the
Fc RIII-B gene is restricted to polymorphonuclear leukocytes and
can be induced by Me SO differentiation of HL60 cells. We
have isolated and sequenced genomic clones of the human Fc RIII-A
and Fc RIII-B genes, located their transcription initiation sites,
identified a different organization of their 5` regions, and
demonstrated four distinct classes of Fc RIII-A transcripts
(a1-a4) compared with a single class of Fc RIII-Bb1
transcripts. Both CD16 promoters (positions -198 to -10)
lack the classical ``TATA'' positioning consensus sequence
but confer transcriptional activity when coupled to the human lysozyme
enhancer. Both promoters also display different tissue-specific
transcriptional activities reflecting the expected gene expression of
Fc RIII-A and Fc RIII-B in NK cells versus polymorphonuclear leukocytes. Within the -198/-10
fragments, the sequences of the two CD16 genes have been identified to
differ in 10 positions. It is suggested that these nucleotide
differences might contribute to cell type-specific transcription of
Fc RIII genes.
INTRODUCTION
Human leukocyte receptors for the Fc fragment of IgG (Fc R)
play an important role in immune responses as they link the humoral
immune system with cellular effector functions. Fc receptors
represent a family of cell surface glycoproteins mediating clearance
and phagocytosis of immune complexes, various forms of
antibody-dependent cellular cytotoxicity (ADCC) and release
of inflammatory cytokines (for review, see (1) ). Fc
receptors have been divided into three classes, namely a high affinity
class (Fc RI) and two low affinity classes (Fc RII and
Fc RIII). All are members of the Ig gene superfamily. Within each
group, multiple subtypes have been identified by molecular cloning.
Structurally conserved extracellular domains are linked to divergent
transmembrane and intracellular domains. Distinctive Fc receptor
genes in addition to differently spliced messages from the same Fc
receptor gene are expressed on different cell types in a
tissue-specific manner generating diverse cellular responses upon
interaction with IgG immune complexes (for review, see (2) ). The low affinity receptor Fc RIII (CD16) is a 50-80-kDa
membrane glycoprotein(3) . At least two isoforms encoded by two
distinct genes, Fc RIII-A and Fc RIII-B, have been
identified(4) . An allotypic polymorphism, NA1 and NA2, has
been described to be associated with the Fc RIII-B receptor
isoform. Fc RIII-A is a transmembrane protein expressed on
activated monocytes/macrophages, NK cells, and a subset of T
cells(5, 6, 7) . In contrast, Fc RIII-B
is a glycosylphosphatidylinositol (GPI)-anchored protein that is
constitutively expressed by neutrophils and after -interferon
(IFN- ) stimulation by
eosinophils(4, 8, 9) . In addition,
Fc RIII-A-specific transcripts can be induced in growth-arrested
human mesangial cells by IFN- (10) . While the GPI
Fc RIII-B isoform is expressed on the cell surface without other
subunits, efficient expression of the transmembrane Fc RIII-A
requires the presence of the Fc RI subunit and is also
enhanced by co-expression of CD3 , a subunit of the T cell
receptors' complex (11, 12, 13) .
Through their differential requirements for these associated
``trigger'' molecules, the Fc RIII isoforms mediate
different functions(14) . The Fc RIII-A transmembrane
receptor on NK cells mediates ADCC, where it represents the only
Fc R(5) . The GPI-linked Fc RIII-B receptor on
polymorphonuclear leukocytes is certainly involved in cell activation,
but its detailed role is still controversial(15, 16) . The Fc RIII receptor appears to be under complex control. First,
it is highly tissue-specific and is expressed on granulocytes as well
as on activated monocytes/macrophages, NK cells, and some cytolytic T
cell subsets. Second, only granulocytes use the GPI-linked
Fc RIII-B isoform encoded by a second gene. Third, the
Fc RIII-B isoform can be induced during Me SO-initiated
granulocytic differentiation of the HL60 human promyelocytic cell line.
Fourth, depending on the cell type, both isoforms can be up-regulated
by IFN- . In this study we report the cloning of both
Fc RIII-A and Fc RIII-B gene promoters. Sequence analysis of
all the cloned transcription initiation sites demonstrates structural
heterogeneity through the use of alternative 5`-UT/S1 exons from the
Fc RIII-A but not from the Fc RIII-B gene. We have defined the
5` sequences necessary for promoter activity by transient transfection
experiments with different parts of the Fc RIII-A and Fc RIII-B
promoters in different cell lines. Both promoters (positions -198
to -10) displayed different tissue-specific transcriptional
activities when coupled to a heterologous enhancer. These different
tissue specificities are suggested to be due to nucleotide differences
of the Fc RIII-A and Fc RIII-B genes identified at 10 positions
in the -198/-10 region.
MATERIALS AND METHODS
CellsHuman NK cell lines have been generated
from NKH1 sorted cells of a normal donor as described
previously(5) . PMN were obtained from heparinized peripheral
blood fractionated by centrifugation over Ficoll-Hypaque (density 1.08)
(Biochrom KG, Berlin, Germany). PMN were separated from erythrocytes by
sedimentation in hydroxyethyl-starch (Fresenius AG, Bad Homburg,
Germany) followed by hypotonic lysis. Several continuously growing cell
lines were used for the transfection experiments. Jurkat is a T cell
leukemia line(17) . U937 is a histiocytic cell line, and HL60
is a promyelocytic cell line(18, 19) . In some
experiments, HL60 cells were induced to express the GPI-anchored
Fc RIII-B receptor isoform upon culturing in the presence of 1.2%
Me SO(20) . YT, a cell line with NK-like
characteristics, was originally established by the group of J.
Yodoi(21) . This cell line has been described to express
Fc RIII. ( )
Southern Blot AnalysisHigh molecular weight
genomic DNA was prepared from human leukocytes of 15 healthy donors
with known NA1/NA2 phenotype using standard methods(22) . The
genomic DNA was digested with BamHI, EcoRI, HindIII, SalI, or TaqI; separated through an
agarose gel; transferred to Hybond-N (Amersham Corp.); and subjected to
Southern blot analysis. Blots were hybridized with probes generated
from the NA1-Fc RIII-B cDNA pGP5 (generously provided by Dr. K.W.
Moore, DNAX, Palo Alto, CA)(23) . The structure of these probes
is shown (see Fig. 2A). Some blots were also hybridized
with S1 and EC1 specific oligonucleotides. Probes were labeled with
[ - P]dCTP using a random primed DNA labeling
kit (Boehringer Mannheim). After overnight hybridization, blots were
washed at high stringency in 0.2 SSC, 1% SDS at 65 °C and
exposed for 24-72 h to Kodak XAR5 x-ray film.
Figure 2:
Panel A, structure of the human
Fc RIII cDNA pGP5. The exon organization derived from the gene map
is drawn to scale (1977 bp), 5` to 3`, left to right.
Exon-intron boundaries are indicated by verticalsolidlines. The signal sequences (S), extracellular
domains (EC), transmembrane domain (TM), cytoplasmic
region (C), and 3`-untranslated region (UT) are
shown. The restriction endonuclease sites and nucleotide map units are
designated for BglII (Bg), EcoRI (E), HindIII (H), KpnI (K), and SalI (S). The fragments of pGP5
utilized as hybridization probes are depicted (80 = BamHI-BglII, 178 = BglII-SalI, 380 = SalI-KpnI, 601 = KpnI-EcoRI, 670 = EcoRI-HindIII). Panel B, structural
organization of the two genes for human Fc RIII A and B. The
exon-intron organization is presented to scale as a linear map, 5` to
3`, left to right. Exon locations (5` S1, S2,
EC1, EC2, TM/C 3`) are boxed. Below the map, the
two selected genomic clones 32 and 31 for human Fc RIII
genes A and B are shown. Restriction enzyme sites for BamHI (B), EcoRI (E), HindIII (H), and SalI (S) are indicated by verticallines. C, sequencing strategy of
the 5` end of genes A and B. The restriction maps of the subcloned 5`
ends of both genes (p32 = 5` end of Fc RIII-A; p31 =
5` end of NA2-Fc RIII-B) are designated. Restriction sites for ApaI (A), BamHI (B), BstYI (Bs), EcoRI (E), EcoRV (RV), SacI (S) and SphI (Sp) are indicated by verticallines. The
sequencing strategy is indicated by arrows below the
maps.
Screening and Isolation of Genomic DNA Clones Encoding
Human Fc RIII-A and Fc RIII-BA genomic DNA library was
constructed in the EMBL3 phage vector (24) by using MboI partial digests of human placenta DNA. We screened
10 plaques with the EC2 380-bp SalI-KpnI
fragment (nucleotides 258-638, see Fig. 2A) of
the pGP5. Seven independent hybridization-positive plaques were
purified to homogeneity after two additional rounds of screening; four
of them also hybridized with the 5` end BamHI-BglII
fragment (containing 80 bp of 5`-UT and signal sequence, see Fig. 2A). Genomic DNA inserts from these four phage
clones were isolated, digested with SalI (in polylinker of
EMBL3) and TaqI, and compared with the TaqI
restriction mapping data from the 5` end distinguishing between the two
Fc RIII-A and Fc RIII-B genes (Fig. 1B). Two
genomic clones, 32 (part of the Fc RIII-A gene) and 31
(NA2 allele of Fc RIII-B), containing the putative promoter regions
were identified and selected for further analysis.
Figure 1:
Southern
blots of human genomic DNA identify differences among the Fc RIII-A
and the NA1 and NA2 alleles of the Fc RIII-B genes. Genomic DNAs isolated from peripheral blood lymphocytes from
individuals of a different phenotype (designated NA2, NA1, NA1NA2) were
used. Panel A, digestion was performed with BamHI (B), HindIII (H), EcoRI (E), or with the combination of two enzymes (HB) and (EB). The digested DNA was electrophoresed in an agarose gel,
transferred to Hybond-N, and hybridized with the 5` 80 bp containing BamHI-BglII fragment of cDNA pGP5 (Fig. 2A). The NA2 homozygote donor demonstrates a
second BamHI restriction fragment not observed in the absence
of the NA2 allele. PanelB, digestion was performed
with TaqI. After electrophoresis and transfer to nylon, the
blot was hybridized with an EC1 oligonucleotide. Rehybridization was
performed with the 30-mer oligonucleotide complementary to S1 sequences
used by primer extension analysis (see ``Materials and
Methods'').
Characterization and Sequence Analysis of Genomic DNA
Clones Containing the 5`-Regulatory Region of the Fc RIII-A and
Fc RIII-B GenesThe DNA inserts from the selected clones
32 and 31 were analyzed by restriction endonuclease mapping
using BamHI, EcoRI, HindIII, and SalI followed by Southern blotting analysis(22) . The
restriction maps were compared with the two Fc RIII genes
characterized by the group of Ravetch(4) . Nucleotide sequence
analyses of the promoter regions were done on two 3-kb HindIII-XhoI fragments (Fig. 2B)
subcloned into the pBluescript KS(+) vector (Stratagene,
Heidelberg, Germany) by the chain termination method (25) using
a T7 polymerase sequencing kit (Amersham Corp.). Derivatives of both
subclones were generated by use of the unique restriction sites, as
outlined in Fig. 2C.
Primer Extension AnalysisPrimer extension was
performed according to methods described previously(22) . Total
cellular RNA was extracted from PMN and cultured CD3 NK cell lines according to the guanidinium thiocyanate
method(26) , followed by chromatography on oligo(dT)-cellulose
for enrichment of poly(A) RNA. A P-end
labeled synthetic 30-mer oligonucleotide was mixed with 10 µg of
poly(A) RNA from PMN and NK cells and an 80%
formamide-containing buffer (pH 7.4), heated to 85 °C for 10 min,
and incubated submerged at 42 °C overnight. The extension reaction
was performed with 200 units of M-MLV reverse transcriptase (Life
Technologies, Inc.) in 20 µl of the recommended buffer and with
actinomycin D (50 µg/ml) at 42 °C for 2 h. After RNase
treatment, the extension products were sized by electrophoresis on an
8% denaturing polyacrylamide gel and visualized by autoradiography. P-end labeled pBR322/HaeIII DNA fragments were
used as molecular weight markers. The oligonucleotide used for primer
extension, 5`-CTAGAAGTAGCAGAGCAGTTGGGAGGAGCA-3` corresponds to
Fc RIII-A and Fc RIII-B sequences +11 to +40 relative
to the translation start codon (ATG).
RNase Protection AssayRNase protection was
performed according to methods described previously(27) . For
this study we inserted the 771- and 767-bp ApaI/EcoNI
restriction fragments (positions -711 and -707 to +60
in Fig. 3) from the 5` end of each gene into the ApaI/XbaI sites of the pBluescript KS(+) vector.
Plasmid DNAs were digested with KpnI (in the polylinker of
pKS+) or with BamHI and BstYI (position
-348 within both genes, see Fig. 3and Fig. 5a), and the respective antisense RNA probes were
synthesized using T7 RNA polymerase (67 units) (Pharmacia Biotech
Inc.), [ - P]UTP, and recommended buffers.
After DNase treatment to remove the template, the probe was ethanol
precipitated, resuspended in hybridization buffer, and mixed directly
with the test RNA. Denaturing polyacrylamide gel electrophoresis was
used to verify that greater than 95% of the synthesized probe was of
full-length. Hybridization was performed with 30 µg of total
cellular RNA, 1 10 cpm of probe, and 30 µl of
formamide hybridization buffer as described above for primer extension.
The mixture was heated to 85 °C for 10 min and incubated submerged
overnight at 45 °C. Digestion of the RNA:RNA hybrids was performed
with a mixture of RNase A (DNase-free, Pharmacia) and RNase T1 (Life
Technologies, Inc.). After phenol/chloroform extraction and ethanol
precipitation, protected fragments were sized and visualized as
described above. A dideoxynucleotide sequencing ladder of the ApaI/EcoNI Fc RIII-A or B fragment primed with
the T7 oligonucleotide of pKS+ was run in parallel.
Figure 3:
Nucleotide sequence comparison of
5`-flanking regions derived from the human Fc RIII genes A and B.
The HindIII-XhoI fragment containing the 5`-flanking
region and the first three coding exons for gene A are in uppercase letters; the translated amino acid sequence is written in the three-letter code. Nucleotide sequences shown at the right are numbered starting from the ATG translation-initiation codon
designated as +1. If nucleotide sequences for gene B differ from
gene A, they are given below those of Fc RIII-A. Dashed lines indicate nucleotide identity to gene A. Base pair
substitutions are shown by the nucleotide change; nucleotide deletions
are marked by asterisks.
Figure 5:
Mapping the transcription-initiation sites
of the human Fc RIII A and B mRNA. a, schematic
presentation of the promoter region of the Fc RIII genes A and B,
the two P-labeled antisense RNA probes, and the
oligonucleotide primer used for RNase protection and primer extension
assays, respectively. The sequences of genes A and B containing
transcription-initiation sites are shown below the schematic diagram.
The transcription-initiation sites are indicated by vertical
bars; the height of each bar is roughly proportional to the amount
of mRNA starting at a particular site, as estimated from the RNase
protection experiments or primer extension assay. b, primer
extension of the human Fc RIII A and B RNAs: 50 µg of total
RNA from PMN and negative control tRNA (not shown) and 10 µg of
poly(A) RNA from NK cells were hybridized with a
5`-end labeled synthetic 30-mer oligonucleotide complementary to
nucleotides +11 to +40 in exon S1 followed by extension using
reverse transcriptase. Sizes of reverse transcribed products were
determined by comparison with HaeIII digested pBR322 DNA
fragments of known molecular weights as shown on the right.
The numbering of the primer-extended products indicate their distance
to the ATG codon designated as +1. The localization of the major
RNA species relative to the ATG codon is indicated on the left for the Fc RIII-Aa1 and Fc RIII-Bb1 transcripts. The 167-,
156-, 153-, and 540-nucleotide bands represent the Fc RIII-Aa2/a3
and the potential Fc RIII-Aa4 transcripts. c, RNase
protection assay of the 5` portion of Fc RIII A and B RNAs: 30
µg of total RNA from negative control tRNA and from PMN and NK
cells were hybridized to the riboprobe synthesized from the gene
A-derived BamHI-EcoNI fragment or from the gene
B-derived BstYI-EcoNI fragment. Sizes of protected
fragments were determined by comparison with a sequencing reaction run
in parallel. The negative numbering of the multiple
transcription-initiation sites indicate their distance to the ATG codon
designated as +1. Using the III-B riboprobe, the 380-nucleotide
Fc RIII-Aa4 protected fragment observed in NK cells with the III-A
riboprobe is converted into four smaller bands, as indicated by the arrows. The protected band at -45 represents the splice
site used by the Fc RIII-Aa2 transcript, as highlighted by the asterisks.
Cloning of Fc RIII-A and Fc RIII-B cDNA 5` Ends
by RACE/PCRThe strategy to obtain cDNA clones for all the
different transcription initiation sites was similar to that originally
employed by Frohman and co-workers(28) . Starting with 2 µg
of poly(A) RNA from PMN and NK cells, the reverse
transcription reaction was performed using 20 pmol of a Fc RIII-A/B
gene-specific primer reverse complementary to EC1 sequences
(5`-CTTCTAGCTGCACCGGGTCACTG-3` position 343-321 in (4) ).
The cDNA pools were subsequently tailed with 15 units of TdT (Life
Technologies, Inc.) in the presence of 0.1 mM dATP for 10 min
at 37 °C. After purification of the reaction mixture, one-fifth was
used for PCR amplification with 10 pmol of
oligo(dT) -adaptor(28) , 25 pmol of
adaptor(28) , and 25 pmol of a second internal EC1 primer
(5`-CACTGTCGTTGACTGTGGCAG-3`, reverse complement to nucleotides at
positions 286-266) in a total volume of 100 µl. 2 units of Taq DNA polymerase (Promega) was added, and the mixture was
annealed at 56 °C for 2 min. The tailed cDNA was extended at 72
°C for 30 min. Using a Thermocycler (MHH, Hannover, Germany), we
carried out 40 cycles of amplification by using a step program (95
°C, 45 s; 56 °C, 2 min; 72 °C, 3 min), followed by a 15-min
final extension at 72 °C. Purified RACE/PCR products were digested
with SalI (located in the adaptor) and BglII (at
position 98 near the S2/EC1 border of Fc RIII-A/B) and cloned into SalI/BamHI-digested pKS+. Plasmids with
Fc RIII-A or Fc RIII-B cDNA inserts were identified through
restriction analyses with PvuII generating a fragment of about
180 bp (from 79 in the S2 exon of Fc RIII-A/B to position 529 of
pKS+). Miniprep plasmid DNA was sequenced using the P-labeled primer originally employed for the primer
extension experiment.
Fc RIII-A and Fc RIII-B Promoter Constructs and
Transient Expression AssayThe constructs were generated by
cloning Fc RIII-A and B genomic sequences from -10 to
-33, from -10 to -198 and from -10 to
-1817/-1821 into the BamHI/BglII site of
the promoterless luciferase expression vector pLuc, originally
designated as pAH1409. The SV40 luciferase (Luc) construct containing
the Luc reporter gene downstream of the SV40 promoter and the pAH1409
plasmid were provided by the group of Dr. A. E. Sippel, Freiburg,
Germany. The lysozyme enhancer is a 240-bp BglII subfragment
from the human lysozyme gene located at -10.2 kb from the
transcriptional start site (29) and was cloned into the KpnI site 3` to the luciferase gene, generating the (LysE) Luc
construct. For expression assays of the Fc RIII-A and Fc RIII-B
promoters in the presence of the heterologous lysozyme enhancer, the
-198 fragments were inserted into p(LysE)Luc. The cells,
maintained in RPMI 1640, 10% fetal calf serum at 2 10 cells/ml, were incubated with 50 µg of the promoter
constructs for 5 min at room temperature in a Bio-Rad 0.4-cm cuvette.
No carrier DNA was used. Plasmid DNA was prepared using equilibrium
centrifugation in cesium chloride/ethidium bromide gradients. U937,
HL60, Jurkat and YT cells were electroporated at 300 V, 960
microfarads, incubated for 15 min on ice, and then transferred to 30 ml
of prewarmed RPMI, 10% fetal calf serum. 20 h after transfection, cells
were harvested and washed in phosphate-buffered saline. Cells were
extracted in 100 µl of hypotonic buffer (25 mM Tris-phosphate, pH 7.8, 8 mM MgCl , 1 mM EDTA, 10% glycerol) by two times of freezing and thawing.
Luciferase activity was measured in a Berthold biolumat in 22.5 mM Tris-phosphate, pH 7.8, 2 mM ATP, 10 mM MgSO , and 0.2 mM luciferin.
RESULTS
Structural Analysis of the 5` Region of the Two Human
Fc RIII-A and Fc RIII-B GenesAnalysis of the gene
structure had identified two highly conserved genes encoding the
transmembrane Fc RIII-A and the GPI-linked Fc RIII-B receptor
isoforms, as described recently(4) . In addition, the
Fc RIII-B gene coding for the GPI-linked isoform on PMN exists in
two allelic forms representing the NA1/NA2 antigen system. The
Fc RIII-A and Fc RIII-B genes have different TaqI and BamHI restriction patterns. For example the presence or
absence of a TaqI site within the fifth exon is informative
for the different membrane anchorages. Using the 601-bp KpnI-EcoRI probe from the transmembrane
domain/cytoplasmic region/3`-UT Exon (Fig. 2A) five TaqI restriction fragments of about 6.5 (representing
Fc RIIIB NA-2 allele), 3.0-3.7 (triplicate after a long run),
and a weak band at about 0.2 kb (representing in addition to the 3.5
band the Fc RIII-A gene, caused by the internal TaqI site
at position 733) can be detected with DNA derived from NA1/NA2
heterozygotes. This pattern was originally described by Ravetch and
co-workers(4) , who have shown that the T to C change at
position 733 in the transcripts encoded by the Fc RIII-A gene
eliminates the TGA stop codon present in the Fc RIII-B gene.
Concerning the 5` regions of both Fc RIII genes, we have performed
single and double digests of genomic DNA from 15 unrelated donors (with
different phenotypes according to the PMN specific NA1/NA2 antigen
system) using BamHI, EcoRI, HindIII, and SalI. These Southern blot analyses proved to be consistent
with the genomic organization of the two Fc RIII-A and
Fc RIII-B genes described in (4) . BamHI digests
demonstrated in addition to a 4.8-kb band a second restriction fragment
of >23 kb after hybridization with the 5` end BamHI-BglII fragment of pGP5 (containing 80 bp of
5`-UT and signal sequence, Fig. 2A) in NA2/NA2 donors
but not in NA1/NA1 homozygotes (Fig. 1A). Therefore the BamHI site generating the 4.8-kb fragment is missing within
the NA2 allele of Fc RIII-B. This BamHI site is localized
about 0.3 kb within the 5`-flanking region of the NA1-Fc RIII-B and
the Fc RIII-A genes, as estimated from the HindIII/BamHI double digests (Fig. 1A). The NA2-Fc RIII-B specific loss of the BamHI site co-segregates with the loss of a SalI site
within the third exon EC1, also known to be NA2-Fc RIII-B gene
specific (data not shown)(4) .The restriction pattern of TaqI after hybridization with oligonucleotides specific for
the two Exons S1 and EC1 distinguishes between the Fc RIII-A and
the NA1 or NA2 Fc RIII-B genes. Irrespective of the phenotype used, TaqI demonstrated two restriction fragments of about 6 kb
(Fc RIII-A, from 0.2 kb downstream to 5.8 kb upstream of the ATG)
and about 2 kb (NA1/NA2-Fc RIII-B, from 0.2 kb downstream to 1.8
upstream of the ATG) (Fig. 1B). The location of these TaqI sites within the first intron and the 5`-flanking regions
of the Fc RIII-A and the two alleles of the Fc RIII-B genes
were observed to be different from the corresponding region presented
earlier(4) .
Cloning and Sequence Comparison of Genomic Clones
Containing the 5` Regions of the Two Human Fc RIII-A and
Fc RIII-B GenesSeven different recombinant clones that
hybridized to the EC2 380-bp SalI-KpnI fragment
(nucleotides 258-638, Fig. 2A) of the human
Fc RIII-B cDNA pGP5 were identified. The two selected clones
32 and 31 exhibited a pattern of TaqI-hybridizing
bands as expected from the determined structure of the Fc RIII-A
and Fc RIII-B genes, respectively. The recombinant clone 31
was identified as the NA2-Fc RIII-B gene without the BamHI
site present in the NA1-Fc RIII-B gene. Complete restriction maps
from 32 and 31 were constructed by digestion with BamHI, EcoRI, HindIII, and SalI (Fig. 2B). The two 3-kb HindIII-XhoI
fragments (Fig. 2B) containing the 5` end of the
Fc RIII-A and Fc RIII-B genes were selected, and parts of these
fragments were subcloned and sequenced according to the strategy
outlined in Fig. 2C.The nucleotide sequences
beginning at the HindIII sites 1817 and 1821 bp upstream and
ending at different XhoI sites 1115 and 1216 bp downstream of
the first ATG present in the pGP5 cDNA sequence were determined for the
Fc RIII-A and Fc RIII-B genes (Fig. 3). The XhoI sites are located at positions within the EC1 exon as
expected from cDNA sequence analysis of NA1 or NA2 Fc RIII-B and
Fc RIII-A
transcripts(4, 23, 30, 31) .
Comparison of the sequences indicates only slight differences. A total
of 58 substitutions and 16 deletions are detected within the first two
introns and the flanking region. From the 38 substitutions of the
flanking region, 26 are found within the first 500 bp upstream of the
ATG codon. The deletion of an 8-bp sequence TGGAGCCT at position
-880 in the Fc RIII-A gene changes the 3-fold repeating
sequence GGAGCCCT present at the same position within the Fc RIII-B
gene. The genomic sequences upstream from the ATG codon lack the common
CAAT and TATA promoter elements at their characteristic positions. In
case of the Fc RIII-B gene, a pyrimidine-rich initiator (Inr)
sequence is present (32) . To identify putative regulatory DNA
elements important for the different cell type specificities of the
Fc RIII-A and Fc RIII-B genes, the 1.8-kb flanking regions were
analyzed by the TFD (version 7.3, September 1993) data base. A total of
599 transcription factor consensus sites for Fc RIII-A and of 583
for Fc RIII-B was observed. No mismatch to the consensus was
allowed during this search. 39 consensus sites are differentially
distributed between the Fc RIII-A and Fc RIII-B genes, 13 of
them are located near the Fc RIII-Aa1 and Fc RIII-Bb1
transcription start sites (see below) (see Fig. 7).
Figure 7:
Different distribution of putative
transcription factor binding sites to the Fc RIII-A and
Fc RIII-B promoters. Shown are the sequences of each
-198/-10 gene promoter. The positions of all nucleotide
differences are indicated. All transcription factor consensus sites are boxed.
Comparison with promoter sequences of other Fc receptor genes
reveals a significant conservation in one region of these promoters. We
termed this region the FcR motif. The FcR motif has the sequence
TTCCTTCCTCTTTT homologous to the PU-box and is found in the human
Fc RI-A/-B/-C, Fc RII-A, and the mouse Fc RI, Fc RIII
genes within the first 100 bp of the
ATG(33, 34, 35, 36) . A similar FcR
motif is also present in the human Fc RIII-A/-B (positions
-80 to -67, Fig. 3) and the rat and mouse Fc RI
genes(37, 38) .
Mapping and Cloning of the Transcription Initiation Sites
of the Human Fc RIII-A and Fc RIII-B GenesFc RIII-A
as well as Fc RIII-B cDNA 5` ends were cloned by using RACE/PCR
with an oligonucleotide reverse complementary to the extreme end of the
EC1 exon and an oligo(dT) primer with adaptor sequences. A total of 11
cDNAs containing the 5` ends of Fc RIII-A transcripts from NK cells
and of 23 cDNAs of Fc RIII-B transcripts from PMN were isolated, as
described under ``Materials and Methods.'' Sequence
analysis of all 23 clones from PMN with a 5` end P-end
labeled 30-mer oligonucleotide reverse complementary to nucleotides
+11 to +40 of both genes (underlined in Fig. 4b) demonstrated Fc RIII-Bb1 transcripts
initiating from multiple starting sites at -20, -27,
-33, -45, -54, -63, -77, -81,
-107, -111, and -113 relative to ATG (Fig. 4a). The frequencies of the cloned start sites
demonstrated the -113/-111/-107 position as the main
transcription initiation site used by Fc RIII-Bb1 mRNA. From NK
cells, four types of Fc RIII-A transcripts distinguished by 5`-UT
ends of different sizes and sequences were identified. According to the
nomenclature rules(2) , these Fc RIII-A transcripts were
assigned as a1 (starting from -20, -27 and -33), a2
(-45 fused to -795), a3 (-62 fused to -795),
and a4 (defined by a cDNA clone containing sequences up to -333) (Fig. 4, a and b). The 5`-UT ends of the a2
and a3 transcripts were both encoded by a separate exon starting at two
sites from -860 and -849. This 5`-UT exon ends at position
-795 and is spliced to -44 within the Fc RIII-Aa2 or
alternatively to -62 within the Fc RIII-Aa3 transcripts. Four
of the 11 cDNA clones from NK cells contained the splice site at
-44 and three initiated at the -20 start site. The starting
sites at -27 and -33, the incomplete Fc RIII-Aa4
transcript at -333, and the -62 splice site were observed
once. Fc RIII-Aa1 transcripts from -45, -54, -63
as identified in case of Fc RIII-Bb1 in PMN were not cloned,
indicating that these positions are not frequently used as
Fc RIII-Aa1 starting sites in NK cells.
Figure 4:
Structure of the 5`-end of the human
Fc RIII-A and Fc RIII-B genes and nucleotide sequence
comparison of distinct transcripts derived from the two Fc RIII
genes. a, 5`-end exon-intron organization of the two genes for
Fc RIII. Exon locations (5`-UT, 5`-UT/S1, S2, EC1) are indicated by boxes. There are multiple transcription initiation sites shown
by the arrows. The positions of the start sites cloned by
RACE/PCR are indicated as the distance to the ATG codon. The distinct
transcripts are designated as b1 in the case of the
Fc RIII-B gene, and as a1, a2, a3, and a4 in the case of the Fc RIII-A gene. Positions
-113/-111/-107 represent the main starting site used
by Fc RIII-Bb1 transcripts. Use of the more 5`-sites at
-860/-849 by the Fc RIII-Aa2 and Fc RIII-Aa3
transcripts are associated with alternative splicing of the 3` end of
the first intron, as indicated by the lines below the
Fc RIII-A gene. A Fc RIII-Aa4 cDNA clone starting at -333
is also shown, but it should be noted that it does not represent a
full-length a4 transcript. b, nucleotide sequence comparison
of distinct transcripts derived from the two Fc RIII genes.
RACE/PCR products resulting from amplification with a reverse
complement EC1 primer, followed by a SalI/BglII
digest were cloned into pBluescript KS+, as described under ``Material and Methods.'' Sequence analysis was
performed with the oligonucleotide reverse complementary to the underlined nucleotides. Four types of transcripts originating
from the Fc RIII-A gene and one transcript type originating from
the Fc RIII-B gene can be distinguished. The transcript names are
listed at the left. With the exception of the Fc RIII-Aa4
transcript, all types of transcripts (a1, a2, a3, and b1) are
associated with multiple initiation sites. For reasons of clarity,
these sites are not presented here but are shown under a (see
above). The positions from the ATG codon (typed in boldface)
of the most 5`-site used by each type of transcripts and from the
5`-UT/5`UT-S1 exon borders of the Fc RIII-Aa2/a3 transcripts are
shown above the respective nucleotide
sequence.
In order to verify the
heterogeneity of the cloned transcription-initiation sites from the
different types of Fc RIII-A and Fc RIII-B transcripts,
primer-extension analysis and RNase protection experiments were
performed. The results obtained by both methods are summarized in Fig. 5a (lowerpart). Due to the absence of a
single defined major transcription initiation site common to both
genes, the numbers of nucleotide positions in the 5`-flanking regions
were assigned on the basis of the first nucleotide of the ATG
translation start codon as +1. Therefore, the size of the observed
protected bands or reverse transcribed products is shown by negative
numbering estimated by their distance to the ATG codon. For
primer-extension analysis, the P-end labeled
oligonucleotide reverse complementary to nucleotides +11 to
+40 of both genes (Fig. 5a) was used, as described
under ``Materials and Methods.'' By using RNA from
NK cells and PMN, multiple bands were observed that were absent with
yeast tRNA. The starting sites at 20, 27, and 33 bp upstream of the
first ATG codon (Fig. 5b) were used equally by
Fc RIII-Aa1 in NK cells and Fc RIII-Bb1 in PMN. In NK cells,
the bands corresponding to the putative -45, -54, -63
transcripts were hardly detectable compared with PMN. Compared with the
RACE/PCR data, the 167-, 156-, and 153-nucleotide reverse transcribed
products represented the Fc RIII-Aa2/a3 transcripts (Fig. 4b). In the RNase protection experiments shown in Fig. 5c, two Fc RIII-A and Fc RIII-B specific
riboprobes, from -348 to +60 relative to ATG, as diagrammed
at the top of Fig. 5a were used. Consistent with the
primer extension data, RNase protection located the
transcription-initiation sites common to both genes at -19,
-27, -33 but with different intensities to -45,
-54, -63 upstream of the first ATG codon (Fig. 5c). In NK cells, the protected fragment at
-45 is much more prominent than the corresponding reverse
transcribed product from the same position, as indicated by the asterisks in Fig. 5c compared with Fig. 5B. Therefore, this band represents the frequently
used splice site found in the cloned Fc RIII-Aa2 transcripts (Fig. 4b). Transcripts at positions
-77/-81 and clustering around -113 were observed by
both methods in PMN but not in NK cells (Fig. 5, b and c). The cluster is the main Fc RIII-Bb1 transcription
initiation site not only in PMN but also in
Me SO-differentiated HL60 cells (data not shown).
Immediately upstream, there is a region with homology to the functional
active interferon responsive region of the Fc RI receptor
gene(39) . Not only in NK cells but also in activated monocytes
and the Fc RIII-A positive T cell clone 1B3(7) , the
transcripts from -77/-81 were not initiated (data not
shown). All of these cell types express the Fc RIII-A gene-encoded
isoform of the receptor. A sequence closely resembling the initiator
element (Inr) encompasses the transcription start site at
-77/-81. At position -75 within this Inr motif, a
nucleotide exchange T to C was detected between the Fc RIII-A and
Fc RIII-B genes. A major protected fragment of about 380
nucleotides corresponding to a putative Fc RIII-Aa4 -338
transcript is seen in NK cells only using the Fc RIII-A derived
riboprobe (Fig. 5c, closedarrow).
After hybridization with the Fc RIII-B derived riboprobe, this
specific band was converted to four main protected fragments of 236,
204, 151, and 137 nucleotides caused by improper
Fc RIII-A:Fc RIII-B RNA:RNA pairing recognized by RNaseA (Fig. 5c, open arrows). This pattern of protected
fragments in NK cells was also observed by using a Fc RIII-B
riboprobe from -707 to +60 relative to ATG (data not shown).
Reverse transcriptase PCR analysis with the primer extension
oligonucleotide and a second primer complementary to positions
-300/-280 but not to -370/-350 yields a
Fc RIII-Aa4 product of the expected size in NK cells, which is
absent in PMN (data not shown). Results of primer extension did not
predict a start site at -338 but showed a 540-nucleotide extended
product in NK cells (Fig. 5b, openarrow). Therefore, it is very likely that the position at
-338 represents a Fc RIII-Aa4 specific splice acceptor site.
Functional Activity of the Promoter Regions of the Two
Human Fc RIII-A and Fc RIII-B GenesTo define the
promoter region required for Fc RIII-A and Fc RIII-B gene
expression, reporter plasmids were constructed using fragments of both
5` ends fused to the promoterless luciferase gene and tested for
luciferase activity following transfection into different cell lines.
Fc RIII-A and Fc RIII-B promoter constructs stimulate
differentially the expression of the luciferase reporter gene in
HL60(19) , U937 (18) and YT (21) cells and are
not active in Jurkat T cells (17) (Fig. 6a).
Figure 6:
Cell type specific activity of the
Fc RIII A and B promoters after transfection into different cell
lines. a, genomic material of the Fc RIII A and B genes
extending to the upstream positions -33, -198, and
-1817/-1821 from the ATG codon were cloned into the
luciferase reporter plasmid pLuc (left part). Transfections
were performed using electroporation of logarithmically growing U937,
HL60, YT, and Jurkat cells as described under ``Materials
and Methods.'' 20 h after electroporation, cell extracts were
prepared and assayed for luciferase activity in a luminometer. An SV40
luciferase chimeric gene was used as a positive control to monitor the
efficiency of transfection, as indicated by the gray bars. White
bars represent activities from constructs containing promoter
sequences of the Fc RIII-A gene, dark bars represent
results from the B gene. At least five independent experiments were
performed with each construct. The promoter activities of a
representative experiment measured in relative light units (RLU) are shown in the right part for all cell types
analyzed. b, YT, HL60, and U937 cells were transfected with
the 198 promoter fragment of the Fc RIII-A and Fc RIII-B genes
in the presence or absence of the heterologous human lysozyme enhancer
cloned 3` to the luciferase reporter gene into the same plasmid. Dark and white bars represent luciferase activities
dependent on Fc RIII-B and Fc RIII-A gene sequences,
respectively. Results are depicted as described
above
In the promyelocytic HL60 cells, the complete 5`-flanking region of
the Fc RIII-B gene, pIII-B(-1821)Luc, shows a strong promoter
activity compared with a reduced activity using the same fragment of
the Fc RIII-A gene (Fig. 6a). Similar results are
obtained using HL60 cells expressing Fc RIII-B after
Me SO treatment (data not shown). Using the promonocytic
U937 cells, results are less pronounced, and without a heterologous
enhancer only basal and almost equal levels of transcription can be
observed (see below). In contrast, in the NK-like YT cell line, the
Fc RIII-A gene construct pIII-A(-1817)Luc is much more active than
the corresponding fragment of the Fc RIII-B gene (Fig. 6a). Thus, the differential promoter activities
of the two 1.8-kb 5`-flanking regions in the YT and HL60 ±
Me SO cells reflect the expected gene activities of
Fc RIII-A and Fc RIII-B in NK cells and PMN, respectively. The
198-bp promoter fragments of gene A termed pIII-A(-198)Luc and of
gene B termed pIII-B(-198)Luc, each containing all respective
starting sites of the Fc RIII-Aa1 and Fc RIII-Bb1 transcripts (Fig. 4a) conferred only a reduced activity compared
with the complete 1.8-kb sequences. This indicates that additional more
distal located elements enhance the activity of the 198-bp
Fc RIII-A and Fc RIII-B promoters. The activities of these two
198-bp promoters were also stimulated in U937, HL60, and YT cells
through the heterologous, human lysozyme enhancer within the combined
pIII-A(-198) + (LysE)Luc and pIII-B(-198) +
(LysE)Luc constructs (Fig. 6b). In YT cells, the
enhancer-dependent stimulation was selective for the Fc RIII-A
198-bp promoter inducing a differential activity specific for NK cells.
On the other hand, a selective enhancement of the Fc RIII-B
promoter was found in the myeloid U937 and HL60 cells. Therefore,
sequences that direct a different cell type specificity of
Fc RIII-Aa1 versus Fc RIII-Bb1 transcription are
located to the first 198 bp from the ATG codon within the respective
Fc RIII-A and Fc RIII-B promoters.
DISCUSSION
These studies establish the initial characterization of the
Fc RIII-A and Fc RIII-B genes with emphasis on the structure of
their promoter regions. Both genes have nearly identical restriction
maps but can be distinguished through different gene-specifically
associated TaqI restriction fragments. Differences in the
location of the TaqI sites within the 5`-flanking regions of
the Fc RIII-A and Fc RIII-B genes proved to be useful in
cloning the respective gene promoter regions. Here, we demonstrate
differences in the sites of transcription initiation as well as in the
5` end gene organization of both genes. Regulatory regions within their
5`-flanking sequences contributing to the cell type specificity of
Fc RIII-A and Fc RIII-B gene expression were identified. DNA
sequence analysis of the 1.8-kb Fc RIII-A and Fc RIII-B
promoters reveals an overall identity of >95%. Most of the
nucleotide differences between Fc RIII-A and Fc RIII-B are
within the first 500 bp of the ATG. From the substitutions identified
between Fc RIII-A and Fc RIII-B, 11 generate the dinucleotide
CpG, a candidate for methylation. In the murine system, thymoma cells
express the low affinity receptors Fc RII and Fc RIII only
after pretreatment with 5`-azacytidine, indicating a possible role for
CpG methylation in controlling Fc gene
activity(40, 41) . The methylation status of the
transcriptionally active region of the human Fc RIII-A and
Fc RIII-B receptors is currently under investigation. Differential experimental strategies were necessary to map the
transcription initiation sites, to identify a more 5` end heterogeneity
in Fc RIII-A mRNA than in Fc RIII-B mRNA, and to determine at
least four distinct types of Fc RIII-A transcripts, a1-a4.
The 5` end of the Fc RIII-B gene is organized in a single 5`-UT/S1
exon continuous with the ATG codon. The 5` end of the Fc RIII-A
gene can be encoded by alternative 5`-UT and 5`-UT/S1 exons. Therefore,
compared with the organization of other human Fc receptor genes,
the 5` end of Fc RIII-B is similar to that of
Fc RI(39) , whereas the 5` end of Fc RIII-A is related
to Fc RII-A(34) . At least four distinct types of
Fc RIII-A transcripts could be identified, distinguished by 5`-UT
ends of different sizes and sequences. Each type of transcripts uses
multiple starting sites. Fc RIII-Aa1 transcripts start from
-33, -27, and -20 upstream from the ATG. These three
sites are also used by the Fc RIII-Bb1 transcripts. Initiation of
Fc RIII-Aa2 occurs at -860 and -849 in a discrete 5`-UT
exon. The sequence is colinear with Fc RIII-A genomic sequence
until a 5`-GT splice site (position -794) and continues through a
3`-AG splice site (position -45) into the 5`-UT/S1 exon. The
related type of Fc RIII-Aa3 transcripts uses an alternative
3`-consensus AG splice site located at -63. The protection
pattern of RNA obtained from NK cells with different riboprobes
demonstrates an Fc RIII-Aa4 transcript at about -338 from
ATG. Results of primer extension did not predict a start site at
-338 but showed a 540-nucleotide extended product. A potential
intron 3`-splice acceptor site is present near the -338 site.
These observations are indicative for the existence of another discrete
exon mapped further upstream, which is encoded only by the
Fc RIII-Aa4. The a4 transcript derived by RACE/PCR cloning from NK
cells shows a continuous sequence from -333 to the ATG identical
with Fc RIII-A gene sequences. Northern blot analysis with
exon-specific Fc RIII cDNA probes derived from pGP5 (Fig. 2A) demonstrates no variation in molecular
weight; only a single 2.2-kb Fc RIII-A mRNA is detectable.
Therefore, we speculate that the elongation of the 5` end has to be
compensated by a shortening at another region within the
Fc RIII-Aa4 transcript. It will be necessary to obtain full-length
cDNA clones corresponding to Fc RIII-Aa4. Two main differences
have been observed in the initiation of Fc RIII-Aa1 and
Fc RIII-Bb1 transcripts. First, the major transcription initiation
sites of Fc RIII-Bb1 in freshly isolated PMN and in
PMN-differentiated HL60 cells (data not shown) are clustered around
-113 from ATG and are absent in Fc RIII-Aa1 expressing NK
cells. Immediately upstream there is a region of homology to the
functional active interferon responsive region present within the
promoter of the high affinity Fc RI receptor gene (Fig. 7)(39) . INF -induced Fc RIII-B
transcription in eosinophils and INF -induced Fc RIII-A
transcription in glomerular mesangial cells has been
described(9, 10) . Second, Fc RIII-Bb1, but not
Fc RIII-Aa1 transcripts, can be initiated at -77 and
-81 from ATG mediated by a pyrimidine-rich initiator (Inr) of the
sequence TACTCCCT also found within the adenovirus major late promoter
(TFII-I-ML-Inr2)(42) . At position -75 within this Inr
motif, a nucleotide exchange of C to T was detected between the
Fc RIII-B and Fc RIII-A genes resulting in the alteration of
the Inr consensus YAYTCYYY to YAYTTYYY(42) . Based on recent in vitro findings, this alteration by itself cannot be
sufficient for a nonfunctional initiator in case of
Fc RIII-A(43) . The factor TFII-I is binding not only to
some Inr elements but also to upstream USF (E box) sites. It was also
suggested that TFII-I and USF interact cooperatively at both Inr and E
box sites(42) . In this respect, it is interesting to note that
a potential USF binding site of the sequence GGCAGGTGAC is present at
position -122 within the Fc RIII-B gene (44) . This E
box is mutated by substituting the CA to a TG at position
-120/-119 in case of Fc RIII-A. Therefore, it might be
possible that the mutations both at positions -120/-119 and
-75 are necessary to account for the observation that the
-77/-81 transcriptional start site is not utilized in the
Fc RIII-A gene. Fc RIII-A and Fc RIII-B do not possess
typical TATA and CAAT boxes, a finding consistent with the presence of
multiple initiation sites. Most but not all of the different initiated
Fc RIII-Aa1 and Fc RIII-Bb1 transcripts can be explained by the
presence of the potential interferon responsive region and the
Inr/E-box sequences. Several putative binding sites of transcription
factors are differentially distributed between the Fc RIII-A and
Fc RIII-B gene promoters as marked in Fig. 7. A Sp1
consensus sequence at -97(45) , two AP-2 sites at
-98 and -181(46) , one AP-1 site at
-155(47) , one CDP (CCAAT displacement protein) site at
-125(48) , one NF- B site at -182(44) ,
an Ets-1 element at -78(44) , and a potential site for
the ets family member PU.1 (GAGGAA) in inverse orientation at
-76 (49) are present in case of Fc RIII-A only. PU.1
binds to the PU box and is expressed in myeloid cells like U937 and
HL60 (49) but not in NK cells and the YT cell line (data not
shown). The sequence around the putative PU.1 site (TTACTTCCTCCTGT) in
the Fc RIII-A gene is nearly identical to a 14-bp promoter element
TTCCTTCCTCTTTT conserved among the human Fc RI-A/-B/-C,
Fc RII-A, and the mouse Fc RI, Fc RIII
genes(33, 34, 35, 36) . A similar
region of homology (TTCCTTCTCCTTYG) is also present in the rat and
mouse Fc RI genes (37, 38) . A common feature of
the Fc receptor genes is the location of this conserved element, the
FcR motif, centered at the transcription initiation units within the
first 100 bp from the ATG codon. This FcR motif has been characterized
to be the DNA target of myeloid specific activators in the Fc RI-A
gene(50) . Preliminary analysis suggests an interaction of
nuclear proteins from myeloid but not NK cells with an oligonucleotide
representing the Fc RIII-A promoter region from bp -95 to
-54 containing the putative PU.1 site (data not shown).
Interestingly, the myeloid-specific shifted complex can be competed
with this FcR motif. Thus, we speculate that the conserved FcR motif
most likely recognized by PU.1 might be involved in the expression of
Fc receptors in myeloid cells. Cells expressing the Fc RIII-A or
Fc RIII-B receptor, namely culture-activated monocytes,
granulocytes, and NK cells are refractory to transfection. Therefore,
we have utilized the NK cell-like YT line, the promonocytic U937 cells,
and the promyelocytic HL60
cells(21, 18, 19) . These cells are easy to
transfect, but they present a premature state of Fc RIII-A and
Fc RIII-B expression. The NK-like YT cells have been described to
express Fc RIII only at low levels. U937 and HL60 cells
are normally negative for Fc RIII-A or Fc RIII-B expression.
However, it should be noted that the expression of the Fc RIII-B
receptor can be induced after granulocytic differentiation of HL60
cells by Me SO(20) . Sequences of both genes from
positions -198 to -10 encoding for all of the mapped and
cloned initiation sites of Fc RIII-Aa1 and Fc RIII-Bb1
transcripts behave like a typical promoter in these cells: they direct
transcription in an orientation-dependent manner (data not shown) and
are stimulated by a heterologous enhancer (Fig. 6b).
Furthermore, using YT and HL60 cells, the -198/-10
promoters are stimulated in a cell type-specific manner by the human
lysozyme enhancer as well as with homologous sequences up to about 1800
bp. For example in the NK-like YT cells, the Fc RIII-A promoter is
much more active. In contrast, in HL60 cells, the Fc RIII-B
promoter is most active. In accordance with this observation,
granulocytic differentiation of HL60 cells using Me SO
results in Fc RIII-B specific promoter activity (not shown). This
differential activity agrees to the in vivo specificity of the
complete Fc RIII-A and Fc RIII-B genes in NK cells versus PMN. Thus, important tissue-specific elements are located in the
-198/-10 regions. A total of 10 nucleotide exchanges
predicted by sequence analysis exists within the Fc RIII-A and
Fc RIII-B -198/-10 promoters. 8 of the 10 nucleotide
differences are of special interest able to generate different
consensus sites for well characterized transcription factors
(summarized in Fig. 7). Preliminary analysis suggests that cell
type specificity cannot simply be mapped and attributed to just one
nucleotide difference only. ( )For both cell type
specificities, several elements are likely to work together in a
cooperative fashion. Therefore, different combinations of mutated
Fc RIII-A and Fc RIII-B hybrid promoters need to be constructed
and tested for their ability to change the promoter activities and
specificities. With HL60 and YT cells, there is now an excellent model
available to identify and characterize mutations sufficient and
necessary for expression of Fc RIII-A and Fc RIII-B in NK cells versus PMN, respectively.
FOOTNOTES
- *
- This work was
supported in part by Grants SFB265/B1 and Schm 596/3-2 of the
Deutsche Forschungsgemeinschaft. The costs of publication of this
article were defrayed in part by the payment of page charges. This
article must therefore by hereby marked
``advertisement'' in accordance with 18 U.S.C.
Section 1734 solely to indicate this fact.
The nucleotide
sequence(s) reported in this paper has been submitted to the
GenBank(TM)/EMBL Data Bank with accession number(s) Z46222 [GenBank]and Z46223[GenBank].
- §
- Supported by a postgraduate grant from the
state of Niedersachsen.
- ¶
- To whom
correspondence should be addressed: Dept. of Immunology, Hannover
Medical School, Konstanty-Gutschowstrasse 8, 30625 Hannover, Germany.
Tel.: 49-511-532-3623; Fax: 49-511-532-5648.
- (
) - The abbreviations used are: ADCC, antibody
dependent cellular cytotoxicity; bp, base pair(s); Fc
RIII, low
affinity receptor for Fc domain of IgG; GPI,
glycosylphosphatidylinositol; kb, kilobase pair(s); PCR, polymerase
chain reaction; PMN, polymorphonuclear leukocytes; RACE, rapid
amplification of cDNA ends; NK, natural killer; USF, upstream
stimulatory factor; UT, untranslated.
- (
) - J. Yodoi,
personal communication.
- (
) - T. Grussenmeyer,
unpublished observations.
ACKNOWLEDGEMENTS
We thank A. Tamm for assistance with cloning
experiments, Dr. K. W. Moore for the gift of cDNA pGP5, and Dr. A. E.
Sippel for the gift of p(SV40)Luc and pAH1409 plasmids.
REFERENCES
- van de Winkel, J. G. J., and Anderson, C. L. (1991) J. Leukocyte Biol. 49, 511-524
[Medline]
[Order article via Infotrieve]
- Ravetch, J. V., and Kinet, J.-P. (1991) Annu. Rev. Immunol. 9, 457-492
[Medline]
[Order article via Infotrieve]
- Huizinga, T. W. J., van der Schoot, C. E., Jost, C., Klaassen, R., Kleijer, M., von dem Borne, A. E. G., Jr., Roos, D., and Tetteroo, P. A. T. (1988) Nature 333, 667-669
[CrossRef][Medline]
[Order article via Infotrieve]
- Ravetch, J. V., and Perussia, B. (1989) J. Exp. Med. 170, 481-497
[Abstract/Free Full Text]
- Werfel, T., Uciechowski, P., Tetteroo, P. A. T., Kurrle, R., Deicher, H., and Schmidt, R. E. (1989) J. Immunol. 142, 1102-1106
[Abstract]
- Phillips, J. H., Chang, C., and Lanier, L. L. (1991) Eur. J. Immunol. 21, 895-899
[Medline]
[Order article via Infotrieve]
- Uciechowski, P., Gessner, J. E., Schindler, R., and Schmidt, R. E. (1992) Eur. J. Immunol. 22, 1635-1638
[Medline]
[Order article via Infotrieve]
- Perussia, B., and Ravetch, J. V. (1991) Eur. J. Immunol. 21, 425-429
[Medline]
[Order article via Infotrieve]
- Hartnell, A., Kay, A. B., and Wardlaw, A. J. (1992) J. Immunol. 148, 1471-1478
[Abstract]
- Radeke, H. H., Gessner, J. E., Uciechowski, P., Mägert, H.-J., Schmidt, R. E., and Resch, K. (1994) J. Immunol. 153, 1281-1292
[Abstract]
- Kurosaki, T., and Ravetch, J. V. (1989) Nature 342, 805-807
[CrossRef][Medline]
[Order article via Infotrieve]
- Ra, C., Jouvin, M.-H. E., Blank, U., and Kinet, J.-P. (1989) Nature 341, 752-754
[CrossRef][Medline]
[Order article via Infotrieve]
- Anderson, P., Caliguri, M., O'Brien, C., Manley, T., Ritz, J., and Schlossman, S. F. (1990) Proc. Natl. Acad. Sci. U. S. A. 87, 2274-2278
[Abstract/Free Full Text]
- Wirthmueller, U., Kurosaki, T., Murakami, M. S., and Ravetch, J. V. (1992) J. Exp. Med. 175, 1381-1390
[Abstract/Free Full Text]
- Hundt, M., and Schmidt, R. E. (1992) Eur. J. Immunol. 22, 811-816
[Medline]
[Order article via Infotrieve]
- Huizinga, T. W. J., van Kemenade, F., Koenderman, L., Dolman, K. M., von dem Borne, A. E. G., Jr., Tetteroo, P. A. T., and Roos, D. (1989) J. Immunol. 142, 2365-2369
[Abstract]
- Wiskocil, R., Weiss, A., Imboden, J., Kamin-Lewis, R., and Stobo, J. (1985) J. Immunol. 134, 1599-1603
[Abstract]
- Sundström, C., and Nilsson, K. (1976) Int. J. Cancer 17, 565-577
[Medline]
[Order article via Infotrieve]
- Collins, S. J. (1987) Blood 70, 1233-1244
[Abstract/Free Full Text]
- Perussia, B., and Ravetch, J. V. (1991) Eur. J. Immunol. 21, 425-429
- Yodoi, J., Teshigawara, K., Nikaido, T., Fukui, K., Noma, T., Honjo, T., Takigawa, M., Sasaki, M., Minato, N., Tsudo, M., Uchiyama, T., and Maeda, M. (1985) J. Immunol. 134, 1623-1630
[Abstract]
- Sambrook, J., Fritsch, E. F., and Maniatis, T., (1989) Molecular Cloning: A Laboratory Manual , Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
- Peltz, G. A., Grundy, H. O., Lebo, R. V., Yssel, H., Barsh, G. S., and Moore, K. W. (1989) Proc. Natl. Acad. Sci. U. S. A. 86, 1013-1017
[Abstract/Free Full Text]
- Frischauf, A. M., Lehrach, H., Poustka, A., and Murray, N. (1993) J. Mol. Biol. 170, 827-842
- Sanger, F., Nicklen, S., and Coulson, A. R. (1977) Proc. Natl. Acad. Sci. U. S. A. 74, 5463-5467
[Abstract/Free Full Text]
- Chirgwin, J. M., Przybyla, A. E., MacDonald, R. J., and Rutter, W. J. (1979) Biochemistry 18, 5294-5299
[CrossRef][Medline]
[Order article via Infotrieve]
- Ausubel, F. M., Brent, R., Kingston, R. E., Moore, D. D., Seidman, J. G., Smith, J. A., and Struhl, K. (1987) Current Protocols in Molecular Biology , John Wiley & Sons, Inc., New York
- Frohman, M. A., Dush, M. K., and Martin, G. R. (1988) Proc. Natl. Acad. Sci. U. S. A. 85, 8998-9002
[Abstract/Free Full Text]
- Peters, C. W. B., Kruse, U., Pollwein, R., Grzeschik, K. H., and Sippel, A. E. (1989) Eur. J. Biochem. 182, 507-516
[Medline]
[Order article via Infotrieve]
- Simmons, D., and Seed, B. (1988) Nature 333, 568-570
[CrossRef][Medline]
[Order article via Infotrieve]
- Scallon, B. J., Scigliano, E., Freedman, V. H., Miedel, M. C., Pan, Y. E., Unkeless, J. C., and Kochan, J. P. (1989) Proc. Natl. Acad. Sci. U. S. A. 86, 5079-5083
[Abstract/Free Full Text]
- Smale, S. T., and Baltimore, D. (1989) Cell 57, 103-113
[CrossRef][Medline]
[Order article via Infotrieve]
- Ernst, L. K., van de Winkel, J. G. J., Chiu, I.-M., and Anderson, C. L. (1992) J. Biol. Chem. 267, 15692-15700
[Abstract/Free Full Text]
- McKenzie, S. E., Keller, M. A., Cassel, D. L., Schreiber, A. D., Schwartz, E., Surrey, S., and Rappaport, E. F. (1992) Mol. Immunol. 29, 1165-1174
[CrossRef][Medline]
[Order article via Infotrieve]
- Osman, N., Kozak, C. A., McKenzie, I. F. C., and Hogarth, P. M. (1992) J. Immunol. 148, 1570-1575
[Abstract]
- Benech, P., Sastry, K., Iyer, R. R., Eichbaum, Q. G., Raveh, D., and Ezekowitz, R. A. B. (1992) J. Exp. Med. 176, 1115-1123
[Abstract/Free Full Text]
- Ye, Z.-S., Kinet, J.-P., and Paul, W. E. (1992) J. Immunol. 149, 897-900
[Abstract]
- Tepler, I., Shimizu, A., and Leder, P. (1989) J. Biol. Chem. 264, 5912-5915
[Abstract/Free Full Text]
- Pearse, R. N., Feinmann, R., and Ravetch, J. V. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 11305-11309
[Abstract/Free Full Text]
- Bonnerot, C., Daëron, M., Varin, N., Amigorena, S., Hogarth, P. M., Even, J., and Fridman, W. H. (1988) J. Immunol. 141, 1026-1033
[Abstract]
- Bonnerot, C., Amigorena, S., Fridman, W. H., Even, J., and Daëron, M. (1990) J. Immunol. 144, 323-328
[Abstract]
- Roy, A. L., Meisterernst, M., Pognonec, P., and Roeder, R. G. (1991) Nature 354, 245-248
[CrossRef][Medline]
[Order article via Infotrieve]
- Javahery, R., Khachi, A., Lo, K., Zenzie-Gregory, B., and Smale, S. T. (1994) Mol. Cell. Biol. 14, 116-127
[Abstract/Free Full Text]
- Faisst, S., and Meyer, S. (1992) Nucleic Acids Res. 20, 3-26
[Free Full Text]
- Briggs, M. R., Kadanaga, J. T., Bell, S. P., and Tjian, R. (1986) Science 234, 47-52
[Abstract/Free Full Text]
- Imagawa, M., Chiu, R., and Karin, M. (1987) Cell 51, 251-260
[CrossRef][Medline]
[Order article via Infotrieve]
- Wasylyk, C., Wasylyk, B., Heidecker, G., Huleihel, M., and Rapp, U. R. (1989) Mol. Cell. Biol. 9, 2247-2250
[Abstract/Free Full Text]
- Skalnik, D. G., Strauss, E. C., and Orkin, S. H. (1991) J. Biol. Chem. 266, 16736-16744
[Abstract/Free Full Text]
- Klemsz, M. J., McKercher, S. R., Celada, A., van Beveren, C., and Maki, R. A. (1990) Cell 61, 113-124
[CrossRef][Medline]
[Order article via Infotrieve]
- Perez, C., Wietzerbin, J., and Benech, P. D. (1993) Mol. Cell. Biol. 13, 2182-2192
[Abstract/Free Full Text]
©1995 by The American Society for Biochemistry and Molecular Biology, Inc.

CiteULike Complore Connotea Del.icio.us Digg Reddit Technorati What's this?
This article has been cited by other articles:

|
 |

|
 |
 
M. Schlapschy, M. Fogarasi, H. Gruber, O. Gresch, C. Schafer, Y. Aguib, and A. Skerra
Functional humanization of an anti-CD16 Fab fragment: obstacles of switching from murine {lambda} to human {lambda} or {kappa} light chains
Protein Eng. Des. Sel.,
March 1, 2009;
22(3):
175 - 188.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
F. Heusohn, G. Wirries, R. E. Schmidt, and J. E. Gessner
The Pmed1 Gene Promoter of Human Fc{gamma}RIIIA Can Function as a NK/T Cell-Specific Restriction Element, Which Involves Binding of Sp1 Transcription Factor
J. Immunol.,
March 15, 2002;
168(6):
2857 - 2864.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
N. Chouchakova, J. Skokowa, U. Baumann, T. Tschernig, K. M. H. Philippens, B. Nieswandt, R. E. Schmidt, and J. E. Gessner
Fc{{gamma}}RIII-Mediated Production of TNF-{{alpha}} Induces Immune Complex Alveolitis Independently of CXC Chemokine Generation
J. Immunol.,
April 15, 2001;
166(8):
5193 - 5200.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
M. B. Callanan, P. Le Baccon, P. Mossuz, S. Duley, C. Bastard, R. Hamoudi, M. J. Dyer, G. Klobeck, R. Rimokh, J. J. Sotto, et al.
The IgG Fc receptor, Fcgamma RIIB, is a target for deregulation by chromosomal translocation in malignant lymphoma
PNAS,
January 4, 2000;
97(1):
309 - 314.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
C. Nishiyama, T. Yokota, K. Okumura, and C. Ra1
The Transcription Factors Elf-1 and GATA-1 Bind to Cell-Specific Enhancer Elements of Human High-Affinity IgE Receptor {alpha}-Chain Gene
J. Immunol.,
July 15, 1999;
163(2):
623 - 630.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
D. Meyer, C. Schiller, J. Westermann, S. Izui, W. L. W. Hazenbos, J. S. Verbeek, R. E. Schmidt, and J. E. Gessner
Fcgamma RIII (CD16)-Deficient Mice Show IgG Isotype-Dependent Protection to Experimental Autoimmune Hemolytic Anemia
Blood,
December 1, 1998;
92(11):
3997 - 4002.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
J. E. Gessner, T. Grussenmeyer, M. Dumbsky, and R. E. Schmidt
Separate Promoters from Proximal and Medial Control Regions Contribute to the Natural Killer Cell-specific Transcription of the Human Fcgamma RIII-A (CD16-A) Receptor Gene
J. Biol. Chem.,
November 29, 1996;
271(48):
30755 - 30764.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
A. Tamm, A. Kister, K. U. Nolte, J. E. Gessner, and R. E. Schmidt
The IgG Binding Site of Human Fc[IMAGE]RIIIB Receptor Involves CC` and FG Loops of the Membrane-proximal Domain
J. Biol. Chem.,
February 16, 1996;
271(7):
3659 - 3666.
[Abstract]
[Full Text]
[PDF]
|
 |
|
Copyright © 1995 by the American Society for Biochemistry and Molecular Biology.
|
Advertisement
Advertisement
|