![]()
|
|
||||||||
(Received for publication, June 2, 1995; and in revised form, August 31, 1995) From the
Tracheobronchial epithelial (TBE) cells that normally do not
express the squamous cell differentiation marker gene, SPR1,
can be induced to produce it by
12-O-tetradecanoylphorbol-13-acetate (TPA). The regulation of SPR1 gene expression by TPA occurs, in part, at the
transcriptional level in primary human and monkey TBE cells. Using a
transient transfection assay, we observed that TPA stimulates the
activity of the reporter gene, chloramphenicol acetyltransferase, by
2-4-fold in transfected TBE cells. However, this chloramphenicol
acetyltransferase activity is cell type-specific with significantly
less activity in transformed epithelial cell lines and no activity in
non-epithelial cell types. TPA-dependent stimulation can also be
demonstrated by cotransfection with plasmid DNAs that overexpress the
JUN family of proteins, especially c-JUN. Overexpression of c-JUN and
TPA treatment synergistically stimulate the SPR1 promoter
activity by more than 40-fold. Deletion analysis of the promoter region
demonstrates that the DNA fragment of the first 98 base pairs of the
5`-flanking region contains the basal promoter activity, while the
region between -162 and -96 contains the cis-enhancer elements for both the basal and
TPA/c-JUN-stimulating promoter activities. This observation is
supported by in vivo genomic footprinting studies that reveal
persistent protections in the following motifs of this region:
-141 TRE, -131 GT, -123 ETS-like, and -111
TRE-like motifs and in the enhanced protections in -141 TRE and
-111 TRE-like motifs in cells after the TPA treatment.
Site-directed mutagenesis in this region demonstrates the involvement
of both -141 TRE and -111 TRE-like motifs in
TPA/c-JUN-dependent stimulation as well as enhanced basal
transcriptional activity. However, it is primarily the -111
TRE-like motif that is involved in the mediation of the enhanced basal
promoter activity of the human SPR1 gene. These results are
further supported by gel mobility shift assays that demonstrate the
involvement of c-JUN and these TRE motifs in the formation of the
DNA-protein complex.
The small proline-rich protein (SPR) ( A unique
feature of the structure of the SPR gene family is that the
central segments of the encoded polypeptides are built up from tandemly
repeated units of either eight (SPR1 and SPR3) or nine (SPR2) amino
acids with the general consensus XKXPEPXX(6) . The function of such a
repeated peptide unit is currently unknown. Backendorf and Hohl (7) suggested that the SPR proteins are potential substrates
involved in squamous cell cornification based on a comparison of both
the N- and C-terminal amino acid sequences of SPR proteins with
involucrin and loricrin, the cornified envelope proteins. Marvin et
al.(8) have suggested that, based on Western blot
analysis, the SPR proteins are part of the cornified envelope. We have
recently demonstrated a similar finding. Unexpectedly, we also observed
SPR1-like antigens in the nucleus(9) . A similar observation
was recently made by Hohl et al.(5) in epidermis.
This finding suggests that the SPR1-like protein may also play a
regulatory role in gene expression. In contrast to squamous tissues,
the presence of SPR proteins is very low in respiratory tract epithelia
that normally express mucociliary functions; however, we have
demonstrated a rapid increase of SPR1 gene product in isolated
human and monkey airway epithelial cells upon plating on a culture
dish(4) . This increase can be reduced by supplementing the
culture medium with vitamin A or its synthetic retinoid
derivatives(4) . Another study has demonstrated that vitamin A
down-regulates the stability of SPR1 mRNA (10) . We
have also observed increased expression of SPR1 protein and mRNA in the
patchy squamous cell metaplasia of monkey tracheal tissues after
maintaining them under a vitamin A-free organ culture condition (data
not shown). TPA, a potent squamous cell differentiation inducer, also
stimulates SPR1 gene expression at the transcriptional
level(11) . These results establish a close relationship
between the up-regulation of SPR1 gene expression and squamous
airway epithelial cell differentiation. The expression of squamous
cell function in respiratory tract epithelium is a phenomenon that is
frequently associated with injury. Squamous cell metaplasia has been
implicated in the development of bronchogenic
cancer(12, 13) .The nature of the induction of
squamous cell differentiation in the conducting airway epithelium is
still unresolved. Therefore, studies of SPR1 gene expression
in non-squamous airway epithelial cells may be different from those
carried out in epithelial cells that express only the differentiation
of skin-like properties such as keratinization and cornification.
Results obtained from studying squamous cell differentiation may
provide essential understanding of the mechanism underlying the
divergent pathways of cell differentiation in conducting airway
epithelium(14) . We have isolated the human SPR1 genomic clone and have completed the DNA sequencing of the
5`-flanking region(11) . The purpose of this communication is
to use the transient transfection study, in vivo genomic
footprinting, site-directed mutagenesis, and the gel mobility shift
assay to elucidate the elements essential for both the basal, uninduced
and TPA-inducible promoter activities. We observed that the expression
of the human SPR1 gene in conducting airway epithelium is
dependent on JUN and TRE motifs located between -141 and
-111 of the 5`-flanking region. Furthermore, the expression is
cell type-specific, with a decrease in the promoter activity from
primary epithelial cells to established cell lines, with no activity in
the non-epithelial cell type.
The
immortalized normal human TBE cell line, BEAS-2B, subclone S, was
obtained from J. F. Lechner (Lovelace Biomedical & Environmental
Research Institute, Albuquerque, NM). This cell line was maintained in
a serum-free hormone-supplemented medium(15, 16) .
Other cell lines, HepG2 (ATCC HB8065, a hepatocellular carcinoma),
Caco-2 (ATCC HTB37, a colon adenocarcinoma), and A172 (ATCC CRL1629, a
glioblastoma), were obtained from the American Type Culture Collection
(ATCC), and they were maintained in serum-supplemented culture
conditions according to the supplier's data sheet.
Various 5`-flanking regions
(between -2000 and +9 relative to the transcription start
site) of the human SPR1 gene were amplified from human genomic
clone (11) by polymerase chain reaction (PCR) with two
restriction sites attached to the two specific primers: SalI
to the 5`-primer and XbaI to the 3`-primer. Positive clones
containing the appropriate inserts were determined by PCR screening and
confirmed by restriction mapping and DNA sequencing. The generation of
various chimeric constructs is described in Fig. 1. The
2000-CAT3, 622-CAT3, 557-CAT3, 162-CAT3, 113-CAT3, 98-CAT3, and 67-CAT3
constructs consist of DNA fragments between -2000 and +9,
-622 and +9, -557 and +9, -162 and +9,
-113 and +9, -98 and +9, and -67 and
+9, respectively, of the SPR1 promoter in the pBL-CAT3
vector under XbaI and SalI cloning sites. The
chimeric constructs 622/81-tk-CAT2, 622/540-tk-CAT2, 193/81-tk-CAT2,
and 162/96-tk-CAT2 contain various 5`-flanking sequences of SPR1 gene between -622 and -81, -622 and -540,
-193 and -81, and -162 and -96 relative to the
transcription start site, respectively, in the pBL-CAT2 vector under XbaI and SalI cloning sites.
Figure 1:
Construction of various SPR1 promoter-CAT reporter constructs. A, identification of
the motifs in the SPR1 5`-flanking region. The location of the
5`-end of the motif in the human SPR1 promoter is identified.
Various SPR1 5`-flanking regions were PCR amplified by primers
containing either a 5`-XbaI or a 3`-SalI cloning site
for direct cloning into the pBL-CAT3 (B) and pBL-CAT2 (C) vectors.
The PCR reactions
were carried out in a total volume of 100 µl containing 10 mM Tris-HCl, pH 8.4, 50 mM KCl, 1.2 mM
MgCl The 451-CAT3 and 135-CAT3 constructs
containing regions between -451 to +9 and -135 to
+9 of the SPR1 promoter, respectively, were constructed
by ligation of SspI-XbaI and HincII-XbaI DNA fragments, digested from 622-CAT3
construct into pBL-CAT3 vector.
DNA fragments were analyzed on 6%
denaturing urea-polyacrylamide gels. The bands on the autoradiogram
were detected after 24-48 h of exposure. The reproducibility of
the in vivo footprinting data was checked by analyzing genomic
DNA samples prepared from three or more separate batches of DMS-treated
cells.
Initially, we observed no
significant difference in either the basal or the TPA-induced CAT
activities between 622-CAT3 and 2000-CAT3 construct transfected cells
of primary TBE cultures (data not presented). Therefore, we focused the
deletional analysis on the region from -622 to +9. As
presented in Fig. 2, the relative CAT activity in 622-CAT3
transient transfected cells without TPA treatment is 24-fold higher
than the control cells transfected with the promoterless pBL-CAT3 DNA
or 2-fold higher than those cells with pBL-CAT2 containing the tk
promoter. The relative CAT activity in the absence of TPA treatment was
the same among different chimeric constructs, except for the 162-CAT3,
which was 4-fold higher (Fig. 2). This implies that the DNA
sequences between -98 and +9 of the 5`-flanking region
contain sufficient information for the basal promoter activity. This
elevation in the basal promoter activity observed in 162-CAT3, but not
in 135-CAT3, implies that the DNA fragment between -162 and
-135 contains a sequence responsible for the enhanced expression.
In contrast, cells transfected with 451-CAT3 construct, which contains
the 162-CAT3 DNA fragment plus the flanking region between -451
and -162, did not exhibit enhanced basal promoter activity. This
implies that the region between -451 and -162 may contain a
sequence that down-regulates this enhanced activity.
Figure 2:
Deletion analysis of the SPR1 promoter. The primary human TBE cells were transfected with
various reporter constructs as indicated, and the control plasmid
pCH110 encodes
To further
elucidate the region involved in the basal promoter activity, a 67-CAT3
chimeric construct that includes -55 ETS, -49 TRE-like, and
-28 TATA was studied. As presented in Fig. 3, the relative
CAT activity in cells transfected with this construct is very low but
significantly higher (2-fold) than the promoterless pBL-CAT3
transfected cells; however, this activity is less than 10% of the
98-CAT3 transfection. To clarify this residual activity, site-directed
mutations in both -55 ETS and -49 TRE-like sites were
prepared. Single or double mutations in these sites have no effect on
this residual CAT activity, which suggests that neither site is
involved in this residual CAT activity.
Figure 3:
Characterization of the 5`-flanking region
of the SPR1 gene involved in basal promoter activity.
Transfection of primary human TBE cells with various chimeric
constructs and CAT assays were carried out as described under
``Materials and Methods.'' A, partial DNA sequences
of wild type 67-CAT3 and various mutant forms. The 67-CAT3 (55M)
construct is mutated at the -55 ETS site, while 67-CAT3 (49M) is
mutated at the -49 TRE-like site, and 67-CAT3 (49M, 55M) has
mutations in both sites. Information regarding the 98-CAT3 construct is
presented in Fig. 1. B, mean and standard error of
relative CAT activity (units of
Figure 4:
Cell type specificity of basal promoter
activity. Primary human and monkey TBE cells (HTBE and MTBE,
respectively), and several established human cell lines as presented
were transfected with 162-CAT3 and 98-CAT3 as described in the text.
Data analysis was carried out similar to that described in Fig. 3. The control, pBL-CAT3 transfected human TBE cells, is
included.
We
observed that TPA transiently stimulates the expression of the JUN
family gene products (data not shown) in TBE cells prior to the
stimulation of SPR1 gene expression. We then examined whether
overexpression of JUN family proteins can enhance the CAT activity in
the absence of TPA treatment. Cotransfection with one of the JUN family
genes in 622-CAT3 transfected cells stimulated CAT activity
2-10-fold in the absence of TPA treatment (Fig. 5). Among
the JUN family genes, c-JUN cotransfection was the most
active. TPA treatment of these c-JUN cotransfected cells resulted in a
40-fold increase of CAT activity; however, TPA has no effect on the
expression of JUN family proteins in cotransfected cells (data not
shown). These results suggest that the SPR1 promoter is
synergistically stimulated by TPA and c-JUN.
Figure 5:
Enhancer activity of various SPR1 promoter regions and the response to TPA and c-JUN. Primary TBE
cells were transfected with various reporter constructs containing
622/81-tk-CAT2, 622/540-tk-CAT2, and 193/81-tk-CAT2 constructs alone or
cotransfected with c-JUN expression plasmid. The transfected cells were
treated with or without TPA (10 ng/ml) for 48 h. CAT activity was
determined as described in Fig. 2. The data were the mean of
three independent dishes.
To further elucidate
whether the regulatory sequences at the 5`-flanking region can enhance
the promoter activity in heterologous constructs, several selective DNA
fragments of SPR1 promoter were cloned to the pBL-CAT2 vector
carrying the heterologous HSV-tk promoter (Fig. 1C). As
shown in Fig. 6, in the absence of TPA and c-JUN cotransfection,
the relative CAT activities in both 622/81-tk-CAT2 and 193/81-tk-CAT2
transfected cells were 13- and 11-fold higher than the pBL-CAT2
control. However, this enhanced activity cannot be seen in
622/540-tk-CAT2 transfected cells. This suggests that the enhanced
activity located at the -193 and -81 5`-flanking region is
capable of stimulating a heterologous promoter. The stimulations by TPA
and c-JUN cotransfection are not as significant as in the homologous
promoter system, only a 20-40% stimulation. However, this
stimulation was not seen in 622/540-tk-CAT2 transfected cells.
Figure 6:
JUN proteins and TPA synergistically
activate SPR1 promoter activity. Primary TBE cells were
cotransfected with a 622-CAT3 construct in combination with c-JUN, JUN
B, or JUN D expression plasmids and the control plasmid pCH110 as
described under ``Materials and Methods.'' The transfected
cells were incubated with or without TPA (10 ng/ml) for 48 h prior to
harvesting, and the CAT activity was determined as described in Fig. 2. The relative CAT activity was further normalized to the
622-CAT3 construct alone in transfected cells with no TPA treatment.
The data were the mean of three independent dishes, and the variation
was within 20%. The partial and completely filled bars represent the activities from untreated and TPA-treated cells,
respectively.
These
results suggest that the DNA sequence located between -193 and
-81 contains the cis-element that is also capable of
activating the heterologous tk promoter in response to TPA/c-JUN
treatment. To elucidate the site(s) responsible for this stimulation,
we carried out site-direct mutations in -141 TRE and -111
TRE-like motifs. As illustrated in Fig. 7, double mutations at
these two sites (-141M, -111M) significantly reduced the
enhancement on tk promoter activity; however, a single mutation at
-141 TRE motif (-141M) has no effect. Yet, a single
mutation at the -111 TRE-like site (-111M) reduced the
enhanced activity by 50%. In contrast to the enhanced tk promoter
activity, a single mutation in either of these two sites has no effect
on the stimulating activity exerted by the c-JUN cotransfection. These
results suggest that any one of these two TRE motifs can participate in
c-JUN mediated stimulation.
Figure 7:
Identification of TRE sites involved in
both basal and c-JUN inducible enhanced promoter activities. Wild type
162/96-CAT2 construct was prepared as described in Fig. 1.
Constructs with mutations at -141 TRE and -111 TRE-like are
shown in A. The 162/96-CAT2 (111M) construct has a mutation at
-111 TRE-like, while 162/96-CAT2 (141M) is mutated at -141
TRE, and 162/96-CAT2 (111M, 141M) is a double mutant of both sites. B, relative CAT activity in transfected primary human TBE
cells treated with c-JUN cotransfection (dark rectangle) or
without the cotransfection (light
rectangle).
Figure 8:
In vivo DMS footprinting of the
-193 to -81 5`-flanking region of the SPR1 promoter. A, identification of the locations and
orientations of the primers used in the Sequenase and PCR amplification
(indicated by arrows). B, both coding (left)
and noncoding (right) strands of -193 to -81
regions were analyzed. The vertical open bars indicate the
positions of different motifs. Protected and hyperreactive G residues
are denoted by open and closed circles, respectively,
and the numbers indicate the SPR1 promoter sequence. Sizes of the circles indicate the relative extents of
DMS protection in vivo. Lane 1, control (C),
protein-free genomic DNA; lane 2, genomic DNA from untreated
primary TBE cells; lane 3, genomic DNA from TPA-treated
primary TBE cells.
Other DMS footprints were detected around
the CRE-like motif. On the coding strand, similar protections occurring
at -587 and -606 G residues were observed in both
TPA-treated and untreated cells (Fig. 9B). On the
noncoding strand, G residue at -582 was partially protected,
whereas G residues at -589, -593, and -598 were
hyperreactive. Again, TPA had no effect on the footprinting pattern in
this region.
Figure 9:
In vivo DMS footprinting of the
-622 to -540 5`-flanking region of the SPR1 promoter. A, identification of the locations and
orientations of the primers used in the Sequenase and PCR amplification
(indicated by arrows). B, both coding (left)
and noncoding (right) strands of -622 to -540
regions were analyzed. Symbols and labels used are
the same as those in Fig. 8.
A summary of these footprinting studies is presented in Fig. 10. There are multiple protections in the region between
the -141 TRE and the -111 TRE-like motifs. These
protections, presumably due to the interactions between the trans-activation proteins and the DNA sequence, are further
enhanced on both -141 TRE and -111 TRE-like motifs by TPA.
In contrast, the protections in the CRE-like motif at -588 are
not affected.
Figure 10:
Summary of in vivo DMS
footprinting analyses of the SPR1 promoter in primary TBE
cells. A, data from Fig. 8; B, data from Fig. 9. Symbols and labels used are described
in Fig. 8.
Figure 11:
Gel mobility shift analysis of the
-162/-96 5`-flanking region of SPR1 promoter.
Preparation of nuclear extracts and gel mobility shift assays were
performed as described under ``Materials and Methods.'' The arrowhead in all three panels indicates the specific retarded
band formed with nuclear extracts, and the asterisk in panel C indicates the supershifted band. A, A
5`-end-labeled double-stranded probe was incubated with 3-5
µg of nuclear extracts (NE). Lane 1 represents
the probe in the absence of nuclear extracts. Lane 2 represents a probe incubated with S-cell nuclear extracts. Lane 3 represents a probe incubated with nuclear extracts in
the presence of an unlabeled double-stranded -162/-96 probe
(self competitor, 100-fold molar excess). A consensus AP1
oligonucleotide (Promega) was included as a cold competitor at
increasing molar excess with respect to the labeled probe (25-, 50-,
and 100-fold molar excess in lanes 4-6, respectively). Lane 7 represents a probe incubated with A172 (fibroblasts)
nuclear extracts. B, S-cell nuclear extracts were incubated
with wild type -162/-96 end-labeled fragment (lane
1), mutated (-141 and -TRE motifs, see Fig. 7for details) -162/-96 labeled fragment (lane 2). C, supershift analysis. S-cell nuclear
extracts were incubated with 1-2 µg of anti-c-JUN antibody
before adding a 5`-end-labeled double-stranded -162/-96
probe as described under ``Materials and Methods.'' Lane
1, nuclear extracts without antibody; lane 2, nuclear
extracts preincubated with c-JUN antibody; and lane 3, c-JUN
antibody without nuclear extracts.
To
further characterize this DNA-protein complex, anti-c-JUN antibody was
used to demonstrate a supershift in this gel mobility shift assay
experiment. As shown in Fig. 11C, a preincubation of
S-cell nuclear extracts with the anti-c-JUN antibody significantly
reduced the retarded complex and caused a supershift in gel mobility
shift assay. The control experiment indicated no complex formation
between the DNA probe and the antibody used in this study (Fig. 11C, lane 3). Furthermore, no gel shift
was observed when the pre-immune serum was used during the
preincubation period (data not shown). These results support the notion
that c-JUN is involved in this DNA-protein complex formation. The small proline-rich protein gene, SPR1, provides
a model for identifying and characterizing the transcription factors
and mechanisms that control squamous cell differentiation. In this
study, we used transient transfection studies, a DMS footprinting
approach, site-directed mutagenesis, and a gel mobility shift assay to
characterize the 5`-regulatory elements of the human SPR1 gene
that are responsible for the basal and TPA-inducible promoter
activities. We identified three distinct elements that work in concert
to regulate the basal promoter activity in cells without the TPA
treatment. First, we observed that the first 98-base pair DNA fragment
at the 5`-flanking region of the human SPR1 gene contains
sufficient information for the basal promoter activity. A deletion
between -98 and -67 substantially reduces this activity.
Neither the -55 ETS or the -49 TRE-like motif is involved
in the residual activity. This is consistent with the presence of the
``TATA'' box at the -28 position in this DNA fragment. Our second finding regarding the regulation of the basal promoter
activity of the human SPR1 gene was that the enhanced element
in the 5`-flanking region was identified. In the homologous promoter
system, the fragment at -162 to -135 is recognized as the
enhancer that elevates the basal promoter activity. However, in a
heterologous promoter system such as the pBL-CAT2, which contains the
HSV-tk promoter, the enhanced activity is located at
-162/-96. Double mutations at the -141 TRE and
-111 TRE-like motifs can eliminate this enhanced activity,
suggesting the participation of both motifs in enhancing the promoter
activity. The -111 TRE-like motif plays a more important role in
this enhanced activity since a mutation in this site reduced the
activity more than 50%. These studies are consistent with the in
vivo footprinting data. The third element in the regulation of SPR1 promoter activity is the suppresser sequence that is
located at the 5`-flanking region between -451 and -162.
The nature of this suppressive effect has not been characterized. We
also identified the regulatory elements that are involved in
TPA-induced promoter activity. Several potential TREs are identified in
the 5`-flanking region of the human SPR1 gene based on the DNA
sequence information; however, not all of the potential motifs are
involved. This is consistent with the report of Morrow et al.(20) that the TRE motif in the human glutathione S-transferase gene promoter is unresponsive to both TPA and
the JUN/FOS protein activation. Based on the results from transient
transfection studies and the DMS footprinting data, we hypothesize that
the DNA fragment between -162 and -96 is involved in the
mediation of TPA responsiveness. This region contains -141 TRE,
-131 GT, -123 ETS-like, and -111 TRE-like motifs. This mediation occurs not only on the homologous promoter but also,
less actively, on heterologous promoters such as the HSV tk promoter.
The reason for the decreased activity on the HSV tk promoter is not
clear. It is possibly due to the fact that this region contains strong
basal enhanced elements that can stimulate the tk promoter more than
30-fold, and further stimulation by TPA and c-JUN is restricted.
Nevertheless, it is possible to demonstrate that double mutations in
both -141 TRE and -111 TRE-like motifs will knock out the
c-JUN-dependent stimulation. A single mutation in either site cannot
eliminate this enhanced activity. These results suggest that either the
-141 TRE or the -111 TRE-like site can be used for
TPA/c-JUN mediated activation. This notion is further supported by the
gel shift and in vivo genomic footprinting analysis. Gel shift
analysis using S-cell nuclear extracts reveals that the mutation of TRE
motifs (-141 and -111) significantly blocks the
protein-binding complex (Fig. 11) at the -162/-96
5`-flanking region. Competition experiments using the consensus AP1
oligonucleotide completely abolishes the binding of nuclear factors,
indicating that the -162/-96 region is probably bound by
AP1 proteins. Further, preincubation of nuclear extracts with an
anti-c-JUN antibody is able to supershift the DNA-protein complex (Fig. 11C). These studies indicate that TRE motifs at
the 5`-flanking region are occupied by transcriptional factors such as
AP1 proteins and c-JUN. In vivo genomic footprinting data
also revealed a persistent protection of G residues in this DNA
fragment; however, the protections on the G residues in both the
-141 TRE and -111 TRE-like motifs were further enhanced in
cells treated with TPA. Actually, a new protection on the -138 G
residue of the -141 TRE motif was induced in cells after the TPA
treatment (Fig. 10). The -141 TRE (TGAGTCA) has a perfect
nucleotide sequence, which matches a known consensus sequence of a TRE.
While the -111 TRE-like (TGAaTCA) has A substituted for G in the
fourth position, the motif should retain 25-75% of the binding
activity of the JUN-FOS complex(20) . We have also demonstrated
that this -111 TRE-like motif plays a more important role than
the -141 TRE motif in mediating both the basal and stimulated
enhanced activities. However, the mediation by the -111
TRE-like motif is not that straightforward. We observed less inducible
CAT activity by TPA in cells transfected with the 113-CAT3 construct
despite the fact that the -111 TRE-like motif is included in this
construct. In contrast, TPA responsiveness was demonstrated in cells
transfected with 135-CAT3, which includes the flanking region between
-135 and -111 in addition to the -111 TRE-like motif.
These data imply that the presence of a flanking sequence between
-135 and -111 is critical for the -111 TRE-like motif
to mediate the TPA responsiveness, especially in the homologous
promoter system. The DNA fragment between -135 and -111
contains both GT and ETS-like motifs at -131 and -123,
respectively. Interestingly, the in vivo DMS footprinting
study demonstrated that the multiple protection persistently appeared
on the G residues of these motifs, regardless of the TPA treatment.
This result further supports the notion that the flanking region is
important to the TRE-like motif in mediating TPA response. Further
experiments are needed to elucidate the role of this flanking region in
mediating the human SPR1 promoter activity. We also
demonstrated that c-JUN is involved in the activation of promoter
activity. Cotransfection with c-JUN expression plasmid DNA can mimic
the action of TPA and can also cooperate with the TPA treatment to
synergistically stimulate the promoter activity. A number of
TPA-inducible genes have been
characterized(21, 22, 23, 24, 25, 26, 27, 28) ,
and the TRE-like motif, consensus sequence TGA(G/C)TCA, in their
promoter/enhancer region has been
recognized(29, 30, 31) . This study is
consistent with the notion that the TRE activity is mediated by the AP1
transcription factor, which is composed of both the JUN and the FOS
family of proteins(32, 33, 34) . The JUN
family proteins(35, 36, 37) , c-JUN, JUN B,
and JUN D, can either homodimerize or heterodimerize with the FOS
family proteins, c-FOS, FOS B, FRA-1, and FRA-2(38) . These
dimers bind to the TRE site, thereby regulating gene expression in
response to TPA(34, 39, 40, 41) .
Northern blot analysis demonstrates that TPA transiently enhances the
c-JUN message in primary TBE cells (data not shown). In contrast, the
messages for JUN B and JUN D are very low in primary TBE cells (data
not shown). Therefore, it is possible that one action of the TPA is to
enhance the c-JUN synthesis. This would explain why c-JUN
cotransfection also stimulates the promoter activity; however, this
action is different but very complementary to the TPA treatment. We
observed a synergistic activation of the SPR1 promoter
activity by both c-JUN cotransfection and the TPA treatment. This
suggests that complementary pathways are activated by these treatments
in the enhancement of the SPR1 promoter activity. It is
necessary to point out that TPA treatment did not enhance the
expression of c-JUN protein in c-JUN cotransfected cells. Therefore,
the main mechanism of the TPA effect does not depend on the c-JUN
production per se but rather on the activation of various
kinases that further activate the c-JUN. One potential mechanism to
account for the increase in c-JUN transcription factor activity would
be the dephosphorylation of phosphoserine and phosphothreonine residues
adjacent to the DNA binding domain of c-JUN protein. These residues are
a target for casein kinase II and, when phosphorylated, inhibit the
ability of c-JUN to bind to DNA(42) . TPA usually activates the
protein kinase C (PKC), which appears to be the regulator for c-JUN
phosphatase that dephosphorylates these residues, thereby stimulating
c-JUN binding and transcriptional activation. Lastly, we
demonstrated that the basal and the enhanced promoter activities of the SPR1 gene observed in TBE cells cannot be demonstrated in
other non-TBE cells. The nature of this cell type-specific mechanism is
not understood; however, a similar cell type-specific and
tissue-specific SPR1 gene expression has been demonstrated by
immunohistochemistry (1) and Northern blot
hybridization(4) . This study suggests that the cell type
specificity occurs at the transcriptional level. Since transcriptional
regulation involves the DNA-protein interactions, it is likely that
these non-TBE cells either lack transcriptional factor(s) to recognize
this SPR1 DNA sequence or contain inhibitory factor(s) that
interfere with the transcription of the SPR1 gene. Gel
mobility shift assays using nuclear extracts from SPR1 expressing (TBE
cells) and nonexpressing (nonepithelial) cell lines show formation of
cell type-specific retarded complex at the SPR1 promoter region.
Further detailed study may help elucidate the nature of this cell type
specificity. In summary, our results suggest the involvement of
-141 TRE and -111 TRE-like motifs and c-JUN expression in
conferring the maximal expression of the human SPR1 gene in
TBE cells. Both -141 TRE and -111 TRE-like motifs are
involved in the basal and TPA-stimulated enhanced activities. Other TRE
sites, such as -472 TRE-like and -49 TRE-like, are not
involved. The exact molecular basis of these motifs and the
corresponding binding factors involved in the SPR1 transcription, however, remain to be established.
Volume 270,
Number 44,
Issue of November 3, 1995 pp. 26451-26459
©1995 by The American Society for Biochemistry and Molecular Biology, Inc.
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
REFERENCES
)family with a
molecular mass ranging from 10 to 30 kDa was first reported by
Kartasova and van de Putte in 1988(1) . They demonstrated that
the synthesis of SPR proteins is rapidly induced in human keratinocyte
cultures after UV irradiation or treatment with TPA. Both of these
treatments enhance the cornification of keratinocytes in culture. Two
distinct groups of SPR cDNA clones were subsequently isolated
using the differential hybridization technique, and their sequences
were determined(1, 2) . Immunohistochemical studies,
using a polyclonal antibody specific to the C-terminal peptides of the
SPR1 protein, demonstrate the presence of a SPR1 antigen in the
suprabasal cell layer of various human squamous tissues such as the
epidermis and esophagus (3) . A close association between the
expression of SPR genes and squamous epithelial cell
differentiation has been further demonstrated by Northern blot analysis (4) and in situ hybridization(5) .
Cell Isolation and Culture
Conditions
Primary TBE cells were isolated from rhesus
monkey and human tracheobronchial tissues, which were obtained from the
California Regional Primate Research Center and the Medical Center of
the University of California at Davis, respectively. All procedures
involved in the tissue procurement were approved by the University of
California at Davis Animal Protocol Review Committee and the Human
Subject Research Review Committee. Epithelial cell isolation and the
culture conditions were carried out as described
previously(15, 16) . Experiments were carried out
between 7 and 14 days after the initiation of primary culture.Plasmids and Construction of CAT Reporter
Constructs
Plasmid pBL-CAT2 contains the herpes simplex
virus (HSV) thymidine kinase (tk) promoter in front of the CAT
structural gene. Plasmid pBL-CAT3 is a promoterless construct. The
expression plasmids encoding JUN B and JUN D cDNAs are pBR322-based
vectors driven by a long terminal repeat promoter of the mouse sarcoma
virus. The other expression plasmid encoding c-JUN cDNA was derived
from pSVL vector (Pharmacia Biotech. Inc.) driven by the SV40 early
promoter. The control plasmid pCH110 encodes
-galactosidase cDNA,
which is driven by the SV40 promoter.
, 0.01% gelatin, 250 µM each of dATP,
dGTP, dCTP, and dTTP (Pharmacia). Initial denaturation was at 95 °C
for 5 min followed by 30 cycles of 94 °C denaturation (1 min), 55
°C annealing (1 min), and 72 °C extension (4 min), with a final
72 °C extension for 7 min in an automated thermal cycler
(Perkin-Elmer Corp.).DNA Transfection and CAT Assays
DNA
transfection was performed using a liposome technique
(Lipofectin) according to the procedure suggested by the
manufacturer (Life Technologies, Inc.). Each culture dish at
70-80% confluence was washed with serum-free culture medium and
then transfected with 3 µg of chimeric construct DNA, 1 µg of
pCH110 plasmid DNA, and 1 µg of expression plasmid DNA when the
cotransfection experiments were carried out. The pUC18 plasmid DNA was
added to ensure that all the individual experiments contained the same
total amount of DNA. TPA was added to transfected cultures at 10 ng/ml
for 48 h before the harvesting. Cell extracts were prepared by
freeze-thaw in 0.25 M Tris-HCl (pH 8.0). The protein
concentration of cell extracts was determined by a modified Bradford
technique (Bio-Rad). Equal amounts of protein were assayed for CAT
activity by either a liquid scintillation method (11) or an
enzyme-linked immunosorbent assay kit (Boehringer Mannheim) following
the manufacturer's suggested protocol. The
-galactosidase
activity, used as the internal control that normalized transfection
efficiency, was determined by a
-galactosidase enzyme assay system
(Promega).Nuclear Extract Preparation and Gel Mobility Shift
Assay
Nuclear extracts were prepared according to the
method of Dignam et al.(17) from cultured cells,
except that during extraction 600 mM NaCl was used instead of
400 mM NaCl. The binding was performed in a 20-µl reaction
volume containing 25 mM HEPES, pH 7.9, 10% (v/v) glycerol, 30
mM NaCl, 0.1 mg/ml bovine serum albumin, 1 mM dithiothreitol, 5 mM MgCl
, 0.5 mM EDTA, 0.5 µg of salmon sperm DNA, and 50-100 ng of
poly(dI-dC). After incubation on ice for 10 min with 3-5 µg
of nuclear extract, 0.1-0.5 ng of end-labeled probe (20,000
cpm) was added and incubated at room temperature for 15-20 min.
The DNA-protein complexes were resolved in native 4% acrylamide gels
(30:1 ratio of acrylamide to bisacrylamide) in 0.5
Tris
borate-EDTA buffer. In supershift analysis, nuclear extracts were mixed
with 1-2 µg of anti-c-JUN antibody (Santa Cruz Biotechnology,
CA) and incubated on ice prior to adding the labeled DNA probe. For
competition experiments, cold consensus AP1 oligonucleotide (Promega)
was added to the reaction mixture prior to adding labeled probe.
In Vivo Dimethyl Sulfate (DMS)
Footprinting
The method of in vivo DMS
footprinting was described by Mueller and Wold(18) . The
primary TBE cells were cultured to 70-80% confluence followed by
incubation with or without TPA (10 ng/ml, Sigma) for 12 h. For in
vivo DMS treatments, cells were treated with 0.1% DMS (Aldrich)
for 2 min at room temperature. The DMS-treated cells were lysed in SDS
buffer (0.5% SDS, 20 mM Tris-Cl, pH 8.0, 200 mM NaCl,
and 20 mM EDTA) and then incubated with proteinase K (250
µg/ml) (Sigma) at 37 °C for 12 h. Genomic DNA was then isolated
by phenol/chloroform extraction. As an in vitro control,
protein-free genomic DNA was prepared and treated with DMS for
20-30 s at room temperature. It was then cleaved by piperidine
(Aldrich) and mapped by the ligation-mediated PCR method of genomic DNA
sequencing(19) .Statistical Analysis
The StatView statistical program on the Macintosh computer was used to perform
analysis of variance between different CAT reporter constructs. The
Fisher PLSD (Protected Least Significant Difference) test was used to
determine whether existing differences were significant at the 95%
confidence level.
Basal Promoter Activity
Previous
research based on the nuclear run-on assay and transient transfection
study suggests that the treatment of primary airway epithelial cells
with TPA stimulates the expression of the SPR1 gene at the
transcriptional level (11) . DNA sequence analysis of genomic
clones revealed the following motifs: ``TATA'' box at
-28; three TRE-like sites at -49, -111, and
-472; ETS at -55 and ETS-like at -123; GT motif
(GGTGG) at -131; TRE site at -141; and CRE-like at
-588 relative to the transcription start site in the 5`-flanking
region of the human SPR1 gene(11) . The -49
TRE-like site and -55 ETS site are merged together. To elucidate
the functional roles of these putative cis-acting elements, a
number of chimeric constructs containing various lengths of the
5`-flanking region and the CAT reporter gene were prepared (Fig. 1). The functional roles for the motifs of -141 TRE,
-131 TRE-like, -55 ETS, and -49 TRE-like were further
analyzed by site-directed mutagenesis. These constructs were used in
transient transfection studies.
-galactosidase cDNA. The transfected cells were
treated with or without TPA (10 ng/ml) for 48 h. CAT activity in
transfected cells was determined by a liquid scintillation method (11) and normalized with the
-galactosidase activity as
described under ``Materials and Methods.'' Bars show
the standard errors of each experiment, which are based on three
independent assays. An asterisk indicates a significant
difference at the 95% confidence between the control (TPA untreated, light rectangle) and TPA-treated (dark rectangle)
transfected cells.
-galactosidase) in cells
transfected with these constructs.
Cell Type-specific Basal Promoter
Activity
Both immunohistochemistry (3) and mRNA
analyses (4) have demonstrated that the expression of the SPR1 gene is closely associated with squamous epithelial cell
types. This specificity is preserved in the basal promoter analysis. As
illustrated in Fig. 4, 162-CAT3 transfected primary human TBE
cells exhibited the highest CAT activity as compared with the
immortalized human normal TBE cell line, S clone, and other ATCC cell
lines. The non-epithelial cell line A172 exhibited no CAT activity. In
the case of transfection with the 98-CAT3 construct, which contains no
enhanced sequence, all TBE cells, regardless of their origin, exhibited
significantly lower levels of basal promoter activity. Transfected
non-TBE cells exhibited no activity.
TPA/c-JUN Inducible Promoter Activity
The
relative CAT activity in 622-CAT3 transfected cells was further
enhanced 4-fold by TPA (Fig. 2). This enhancement of promoter
activity by TPA is maintained in various deletion-construct transfected
TBE cells, until the TRE-like motif at -111 is deleted in such
constructs as 98-CAT3 and 67-CAT3. These results imply that the
CRE-like motif at -588 and the two TRE-like motifs at -472
and -49 are not involved in mediating the TPA response.
Genomic Footprinting of SPR1 Promoter
To
further understand the nature of the regulation of SPR1 gene
expression in vivo, the interactions between the promoter DNA
sequence and transcriptional proteins were studied by DMS footprinting.
Using appropriate primers as described in Fig. 8A, the
DNA-protein interaction sites of the SPR1 promoter region were
mapped. Genomic footprinting data of the DNA fragment between
-164 and -94 are displayed in Fig. 8B. The
G residue at -140 of the coding strand of the TRE motif was
partially protected, while the flanking G residue at -143 was
hyperreactive in primary TBE cells. This protection at -140 G
residue was slightly enhanced by TPA. In addition, a displayed
protection pattern at -138 G residue was observed only in
TPA-treated cells. Other protection residues in the coding strand
included the G residues at -130, -127, -126,
-121, -120, which are parts of the GT (-131 to
-127) and ETS-like (-123 to -116) motifs. At the
-111 TRE-like motif site, the G residue at -110 was
partially protected, and this protection was slightly enhanced in cells
after the TPA treatment. The G residues at -113, -112, and
-99 in other flanking regions were partially protected, whereas
the G residue at -94 was hyperreactive to piperidine cleavage in
both TPA-treated or untreated cells. On the noncoding strand, only G
residues at -104 and -106 displayed protections (Fig. 8B).
Identification of Nuclear Factors That Bind to the
-162/-96 Fragment of the SPR1 Promoter
The
DNA-protein interactions were further studied by using the gel mobility
shift assay. A -162/-96 probe containing the TRE sites
(-141 TRE and -111 TRE-like) forms a retarded complex in
S-cell nuclear extracts (Fig. 11A, lane 2).
The specificity of the DNA-protein complex was demonstrated by a
self-competition with the unlabeled DNA probe of the region (Fig. 11A, lane 3) and by the DNA fragment
known to bind the AP1 transcriptional protein complex (Fig. 11A, lanes 4-6). Furthermore, this
binding is cell type-specific. As shown in Fig. 11, incubation
of the nuclear extracts isolated from fibroblasts (A172) (Fig. 11A, lane 7) with -162/-96
probe did not show any retarded complex. Site-directed mutagenesis in
either of these two TRE sites has no effect on the DNA-protein complex
formation (data not shown); however, double mutations in both TRE sites
(-141 and -111) result in a loss of DNA-protein complex
formation (Fig. 11B). These results suggest that these
two TRE sites participate in DNA-protein complex formation.
)
We thank Dr. Gang An for initial isolation of the
human SPR1 genomic clones used for this study. Yu Hua Zhao is
thanked for assistance in cell culture. We also acknowledge the editing
work of Michael Trulson prior to the submission of this manuscript.
©1995 by The American Society for Biochemistry and Molecular Biology, Inc.
![]()
CiteULike
Complore
Connotea
Del.icio.us
Digg
Reddit
Technorati What's this?
This article has been cited by other articles:
![]() |
Y. Daniely, G. Liao, D. Dixon, R. I. Linnoila, A. Lori, S. H. Randell, M. Oren, and A. M. Jetten Critical role of p63 in the development of a normal esophageal and tracheobronchial epithelium Am J Physiol Cell Physiol, July 1, 2004; 287(1): C171 - C181. [Abstract] [Full Text] [PDF] |
||||
![]() |
K. Yoneda, M. M.-J. Chang, K. Chmiel, Y. Chen, and R. Wu Application of High-Density DNA Microarray to Study Smoke- and Hydrogen Peroxide-Induced Injury and Repair in Human Bronchial Epithelial Cells J. Am. Soc. Nephrol., August 1, 2003; 14(90003): S284 - 289. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. P. M. Reddy, H. Vuong, and P. Adiseshaiah Interplay between Proximal and Distal Promoter Elements Is Required for Squamous Differentiation Marker Induction in the Bronchial Epithelium: ROLE FOR ESE-1, Sp1, AND AP-1 PROTEINS J. Biol. Chem., June 6, 2003; 278(24): 21378 - 21387. [Abstract] [Full Text] [PDF] |
||||
![]() |
D. Newman, M. Sakaue, J. S. Koo, K.-S. Kim, S. J. Baek, T. Eling, and A. M. Jetten Differential Regulation of Nonsteroidal Anti-Inflammatory Drug-Activated Gene in Normal Human Tracheobronchial Epithelial and Lung Carcinoma Cells by Retinoids Mol. Pharmacol., March 1, 2003; 63(3): 557 - 564. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. P. M. Reddy and B. T. Mossman Role and regulation of activator protein-1 in toxicant-induced responses of the lung Am J Physiol Lung Cell Mol Physiol, December 1, 2002; 283(6): L1161 - L1178. [Abstract] [Full Text] [PDF] |
||||
![]() |
S.-I. Jang and P. M. Steinert Loricrin Expression in Cultured Human Keratinocytes Is Controlled by a Complex Interplay between Transcription Factors of the Sp1, CREB, AP1, and AP2 Families J. Biol. Chem., October 25, 2002; 277(44): 42268 - 42279. [Abstract] [Full Text] [PDF] |
||||
![]() |
W.-H. Chang, S. P.-M. Reddy, Y.-P. P. Di, K. Yoneda, R. Harper, and R. Wu Regulation of Thioredoxin Gene Expression by Vitamin A in Human Airway Epithelial Cells Am. J. Respir. Cell Mol. Biol., May 1, 2002; 26(5): 627 - 635. [Abstract] [Full Text] [PDF] |
||||
![]() |
H. Vuong, T. Patterson, P. Adiseshaiah, P. Shapiro, D. V. Kalvakolanu, and S. P. M. Reddy JNK1 and AP-1 regulate PMA-inducible squamous differentiation marker expression in Clara-like H441 cells Am J Physiol Lung Cell Mol Physiol, February 1, 2002; 282(2): L215 - L225. [Abstract] [Full Text] [PDF] |
||||
![]() |
K. YONEDA, K. PECK, M. M.-J. CHANG, K. CHMIEL, Y.-P. SHER, J. CHEN, P.-C. YANG, Y. CHEN, and R. WU Development of High-density DNA Microarray Membrane for Profiling Smoke- and Hydrogen Peroxide-induced Genes in a Human Bronchial Epithelial Cell Line Am. J. Respir. Crit. Care Med., November 15, 2001; 164(10): S85 - 89. [Abstract] [Full Text] [PDF] |
||||
![]() |
Y. CHEN, Y. H. ZHAO, and R. WU In Silico Cloning of Mouse Muc5b Gene and Upregulation of Its Expression in Mouse Asthma Model Am. J. Respir. Crit. Care Med., September 15, 2001; 164(6): 1059 - 1066. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. Deng, Y. Chen, and R. Wu Induction of Cell Cornification and Enhanced Squamous-Cell Marker SPRR1 Gene Expression by Phorbol Ester Are Regulated by Different Signaling Pathways in Human Conducting Airway Epithelial Cells Am. J. Respir. Cell Mol. Biol., May 1, 2000; 22(5): 597 - 603. [Abstract] [Full Text] |
||||
![]() |
D. Lau, L. Xue, R. Hu, T. Liaw, R. Wu, and S. Reddy Expression and Regulation of a Molecular Marker, SPR1, in Multistep Bronchial Carcinogenesis Am. J. Respir. Cell Mol. Biol., January 1, 2000; 22(1): 92 - 96. [Abstract] [Full Text] |
||||
![]() |
A. Medvedev, N. A. Saunders, H. Matsuura, A. Chistokhina, and A. M. Jetten Regulation of the Transglutaminase I Gene. IDENTIFICATION OF DNA ELEMENTS INVOLVED IN ITS TRANSCRIPTIONAL CONTROL IN TRACHEOBRONCHIAL EPITHELIAL CELLS J. Biol. Chem., February 5, 1999; 274(6): 3887 - 3 |