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(Received for publication, September 20, 1995) From the
Human involucrin whose gene transcription is directed by a
2456-nucleotide (nt) 5`-noncoding region is a structural component of
the epithelial cornified layer. Transient transfection assays
demonstrated that this region is transcriptionally active in
multiplying keratinocytes and is enhanced by 2 mM CaCl
The differentiation of stratified epithelia requires the
harmonious expression of several structural and regulatory proteins.
The complex regulatory pathways that direct the transcription of
epithelial differentiation-related genes are of particular importance
in human disease. Involucrin, a precursor of the cornified envelope
of terminally differentiated keratinocytes(1, 2) , is
apparently limited to primates (3) . The involucrin protein has
a molecular mass of 68 kDa and possesses a central glutamyl-rich domain
formed with 39 repeats of a 10-amino acid cassette (4) which is
required for the cross-linking activity of the calcium-dependent
epithelial transglutaminase during cornified envelope
formation(5, 6, 7, 8) . The human
involucrin gene is about 6000 nt in size composed of two exons of 43
and 2107 nt, respectively, separated by an intron of 1188
nt(4) . A 2456-nt noncoding sequence located 5` of the first
involucrin exon has transcriptional regulatory elements that control
its transcriptional activity(9, 10, 11) .
Analysis of in vitro and in vivo results show that
the involucrin gene activation depends on the interaction of
transcriptional factors present in the keratinocyte
nucleus(9, 10, 11) . In vitro and in vivo experiments correlate the presence of involucrin
transcripts and protein following the progression of keratinocytes from
the basal layer to terminal differentiation
state(12, 13, 14) . Thus, the transcriptional
factors required for specific involucrin gene transcription may also be
necessary for expression of other epithelial terminal
differentiation-related genes(15, 16, 17) .
Interestingly, several genes related to terminal differentiation, such
as involucrin, profilaggrin, and loricrin, are located on chromosome
1q21(18) . The 5`-noncoding region controlled the expression
of the involucrin gene in transient transfection of cultured human
keratinocytes(9) . This region was divided functionally into
two portions: the proximal 900-nt promoter region with the putative
TATA box and an upstream 1600-nt region with necessary elements for the
proper expression of the involucrin gene(9) . Interestingly,
the entire 2456-nt 5`-noncoding segment activity is tissue-specific in
transgenic mice, suggesting that the basic regulatory elements of the
involucrin gene are widespread in mammals(10, 19) . The reported sequence of the 900-nt proximal promoter region active
in keratinocytes contains putative target sites for the AP-1 family of
transcriptional factors(9, 11) . Moreover, the
addition of TPA, ( To investigate the transcriptional regulation of the
involucrin gene, several constructs of the 2456-nt 5`-noncoding region
were transfected into cultured human keratinocytes during
multiplication (0.1 mM CaCl
Figure 1:
Different
transcriptional regulatory domains are present in the 2456-nt human
involucrin 5`-noncoding region. A, activity of deletion
mutants of the involucrin gene 5`-noncoding region. Multiplying normal
keratinocytes were transfected with 10 µg of total plasmid DNA from
different deletion constructs as described under ``Materials and
Methods.'' The average CAT activities relative to the promoterless
vector pCAT-basic were obtained from at least three independent
experiments 48 h post-transfection. The transcriptional start site is
represented by an arrow. The various deleted constructs, the
putative TATA box, the restriction sites for ApaI, HindIII, PstI, RsaI, and XbaI, as
well as the SV40 minimal promoter (SV) and the herpes simplex
type 1 thymidine kinase promoter (TK) are indicated. B, cell type-specific enhancer activity of the human
involucrin distal enhancer region. pTKM and p1.1TKM plasmids (10
µg) were transfected into multiplying human keratinocytes, MRC-5
fibroblasts, and C-33A cell line. Cells were harvested 48 h
post-transfection. Because of the different transfection efficiencies,
the activities are plotted relative to the SV40
enhancer/promoter.
Figure 3:
Human involucrin 5`-noncoding region. A, complete nucleotide sequence of the involucrin 2456-nt
regulatory region. Nucleotide position number -2456 corresponds
to the HindIII site of p2.6CAT plasmid. The sequence segment
from nt -784 to 49 was reported previously(12) .
Predicted consensus sequences for several transcriptional factors
within the proximal 784 nt (underlined) and restriction sites
for ApaI, HindIII, and PstI are shown. TATA
box and transcription start site are double-underlined. B, plasmid constructs employed for DNase I footprint analysis.
The ApaI-XbaI and HindIII-ApaI
fragments from p827CAT plasmid are cloned in pIN220 and pIN630
plasmids, respectively. Thick black lines show the position of
oligonucleotides employed in gel-shift assays (H1, H2, H3, H4, H4
2072, and H4 2126). The TATA box (vertical box)
and ApaI, HindIII, PstI, and XbaI
restriction sites are shown.
The complete
nucleotide sequence from p2.6CAT insert is recorded in GeneBank(TM)
(accession number U23404). All constructs were sequenced using
Sequenase (Amersham Corp.) or the chemical degradation method (28) . All oligonucleotides (Table 1) were synthesized in
an Applied BioSystems 391 DNA synthesizer.
Confirmation of
the above observation was obtained with the p220CAT plasmid containing
the ApaI-XbaI fragment from p827CAT, a 6-fold
increase in CAT activity relative to p827CAT was observed (Fig. 1A). Therefore, the region upstream the ApaI site, probably has a negative regulatory element. To
explore this possibility, the PstI-PstI fragment from
p827CAT was cloned in the p610CP plasmid before the SV40 promoter and
transfected to multiplying human keratinocytes. However, the observed
CAT activity of p610CP was similar to that obtained with the SV40
promoter alone, denotating that other elements present in p827CAT
construct are associated with the inhibitory function (Fig. 1A). None of the constructs presented activity
when transfected into HeLa cells, which do not express involucrin (data
not shown). The p1.1TKM construct was transfected in MRC-5 fibroblasts
and C-33A cells to establish the cell type specificity of this
enhancer. A mild relative activity of p1.1TKM was noticed in C-33A
cells, whereas this same construct remained silent in MRC-5 fibroblasts (Fig. 1B). These results suggest that the elements
regulating transcription from the distal enhancer are specific of
epithelial-derived cells. The p2.6CAT plasmid displayed 5-fold
activation in calcium-induced differentiation conditions when
transfected in keratinocytes stimulated to differentiate by increasing
the CaCl
Figure 2:
Activity of the involucrin gene
5`-noncoding region in differentiation-induced keratinocytes. A, differentiation induction does not stimulate human
involucrin 5`-noncoding proximal 784-nt fragment. Normal keratinocytes
were transfected with 10 µg of total plasmid DNAs from p2.6CAT,
p827CAT, p220CAT, and p97CAT constructs. Transfected cells were grown
in multiplying (0.1 mM CaCl
Thus, three transcriptional regulatory
domains are established: a distal enhancer with calcium responsiveness
located between nt -2456 and -1272, a possible
transcriptional silencer located between nt -651 and -160,
and a proximal enhancer/promoter located between nt -160 and
-1/+1.
Figure 4:
DNase I footprint analysis of the human
involucrin proximal enhancer/promoter region. A, nuclear
extracts (35 µg) from multiplying (Ker) and 2 mM CaCl
HP-1 footprint includes the
putative TATA box and a consensus sequence for the Sp-1 transcriptional
factor 5`-GGAGGG-3`(35) . HP-2 overlaps HP-1 and is located on
two putative AP-1 binding sites. The HP-3 footprint is localized over a
third AP-1 binding site meanwhile HP-4 is associated to a putative Myb
protein binding sequence 5`-CCTAAAG-3` (6) . Footprint assays
of pIN220 employing different amounts of a competitor oligonucleotide
containing a bona fide AP-1 site from the human papillomavirus
type 18 (HPV-18; (31) ), and nuclear extracts from multiplying
keratinocytes resulted in a dose-dependent competition of HP-2 and HP-3
footprints, suggesting that the nuclear factor involved is AP-1 (Fig. 4B).
Figure 5:
The human involucrin promoter contains
binding sites recognized by AP-1 factor. A, gel-shift assays
were done incubating the
In addition, gel supershift experiments were
performed with nuclear extracts from multiplying keratinocytes to
confirm the identity of the observed AP-1-specific complexes in the
pIN220 fragment. A decrease in the intensity of the specific
DNA-protein retarded complex was observed in the presence of a specific
rabbit polyclonal anti-c-jun/AP-1 antibody with the appearance
of a clear supershifted band (Fig. 5B). In contrast, a
heterologous rabbit polyclonal antibody directed against the human
papillomavirus type 16 E7 protein did not affect the retarded complexes (Fig. 5B). Similar results were obtained with nuclear
extracts from HeLa cells and CaCl
Figure 6:
Footprint analysis of the human involucrin
transcriptional silencer. Nuclear extracts (30 µg) from multiplying (Ker) and 2 mM CaCl
Figure 7:
DNA-binding proteins interaction with the
human involucrin transcriptional silencer. Gel-shift assays were
performed incubating nuclear extracts from multiplying (Ker)
and 2 mM CaCl
H3 and H4 oligonucleotides
produced a more elaborated gel-shift pattern. H3 presented at least two
specific retarded complexes which were increased in nuclear extracts
from CaCl Cell type specificity was tested using nuclear extracts from HeLa
cells. The similarity of the gel-shift pattern with H1 and H2 suggests
that nuclear factors are shared by HeLa cells and keratinocytes (Fig. 8, panels H1 and H2). In contrast,
differences were observed between HeLa cells and keratinocytes with the
H3 and H4 oligonucleotides. H3 had an extra upper DNA-protein complex
with HeLa nuclear extracts. The common complexes seem to be produced by
a nuclear protein more abundant in HeLa cells than in keratinocytes (Fig. 8, panel H3). For H4 oligonucleotide, at least
one DNA-protein complex was absent from keratinocyte nuclear extracts,
suggesting that in HeLa cells additional factors may interact with this
region (Fig. 8, panel H4).
Figure 8:
Differential DNA-protein binding between
keratinocytes and HeLa cells. Nuclear extracts of multiplying (Ker) and CaCl
Figure 9:
The H2 footprint corresponds to AP-1
transcriptional factor. A, gel-shift assays were performed
using 1 ng of end-labeled H2 oligonucleotide as described in the legend
to Fig. 5A(-) or with 30- and 100-fold molar
excesses of the indicated competitor oligonucleotides and nuclear
extracts from multiplying human keratinocytes. The arrow indicates the specific AP-1-retarded complex. B, gel
supershift assays were performed as described in the legend to Fig. 5B using nuclear extracts from multiplying (Ker) and 2 mM CaCl
Gel supershift
assays confirmed the AP-1 identity of the H2 complex using nuclear
extracts from multiplying and CaCl Two different potential YY1 binding sites
coincide with the position of H4 footprint, 5`-TTTCCATTTCA-3` and
5`-TCATTTTGAA-3` at nt -383 and -329, respectively (Fig. 3A). These sequences share homology with the
5`-CAT-3` motif present in the YY1 binding sites from several genes (Fig. 10A). To test if these sequences indeed bind the
YY1 transcriptional factor, competitive gel-shift assays were performed
using the end-labeled H4 2072 and H4 2126 oligonucleotides (flanking
the H4 footprint) and the P5+1 and P5+1 mutant from AAV (38) and YY1 (40, 41) nonlabeled competitors
with nuclear extracts from HeLa cells and multiplying keratinocytes.
Specific complexes for H4 2072 and H4 2126 were efficiently competed
with both P5+1 and YY1 oligonucleotides, but not with a P5+1
mutant, which does not bind YY1 (Fig. 10B).
Additionally, cross-competition between H4 2072 and H4 2126
oligonucleotides indicates that YY1 interacts with both sequences.
Figure 10:
YY1 transcriptional factor binds to the
human involucrin silencer region. A, comparison of homologous
YY1 sequences from different promoters. Boxes show conserved
sequences. H4 2072 and H4 2126 are referred to oligonucleotides
containing the 5` and 3` ends of the H4 footprint, respectively. B, YY1 interacts with the human involucrin putative
transcriptional silencer. Gel-shift assays were done employing 1 ng of
end-labeled H4 2072 or H4 2126 oligonucleotides (containing the
putative YY1 sites from H4 footprint) and nuclear extracts from
multiplying keratinocytes as described in the legend to Fig. 5A. For specific competition, 100- and 200-fold
molar excess of the indicated competitor oligonucleotide was used prior
electrophoresis through 4% nondenaturing low ionic strength
polyacrylamide gels.
The human involucrin 5`-noncoding region contains several
binding sites for transcriptional regulatory proteins. The present
results describe the presence of three functional domains, one
enhancer/promoter and a transcriptional silencer domains located within
a 784-nt fragment proximal to the transcription start site as well as a
far upstream 1185-nt enhancer domain (Fig. 11).
Figure 11:
Summary of transcriptional factors
interacting with the proximal enhancer/promoter and silencer domains
within the human involucrin 5`-noncoding region. Footprint sites in
upper and lower DNA strands are indicated by cross-hatched
boxes. The TATA box position is represented by a vertical
box. Identified YY1 and AP-1 sites are shown as pentagons and hexagons, respectively. The arrow shows the
direction and transcription start site. Restriction sites are provided
as a reference.
The
full-length 2456-nt involucrin upstream regulatory region displayed
significant activity in multiplying normal keratinocytes, while the
proximal 784-nt fragment did not. Interestingly, only the p2.6CAT
construct with the intact 5`-noncoding region and the distal 1185-nt
enhancer were activated after calcium induction of differentiation,
suggesting that factors associated with calcium activation interact
within this last region. The distal enhancer was ineffective in
fibroblasts indicating cell type specificity of this enhancer function.
Nevertheless, the proximal enhancer/promoter and the transcriptional
silencer were not altered by differentiation induction. No
transcriptional activity was noticed with any of these functional
regions in non-involucrin expressing cells, such as HeLa or
fibroblasts, indicating that cell type specificity could be dependent
either on several factors or a single transcriptional factor associated
with all the three regulatory domains. The interaction of AP-1 with
the proximal enhancer/promoter and the putative transcriptional
silencer reported here suggests that this transcriptional factor may be
primarily responsible for specific involucrin transcriptional activity
in normal keratinocytes. The similarity between the footprint and
gel-shift patterns observed with both regions independent of the
differentiation state of normal keratinocytes supports this notion.
AP-1, a transcriptional factor integrated by dimerization of products
from fos and jun oncogene families(42) ,
activates genes with the 5`-TGANTC/AA-3` consensus motif in response to
compounds such as TPA that activate the protein kinase
C(36, 37) . The results presented here agree with
previous reports showing that TPA treatment or fos and jun overexpression activates transcription from the proximal 784-nt
fragment(11) . A recent report (43) demonstrates that
AP-1 sites present in the proximal enhancer/promoter (nt -124 to
-118) and in the transcriptional silencer (nt -288 to
-282) are important for the TPA responsiveness of the human
involucrin gene. Accordingly, these AP-1 sites coincide with the
position of HP-3 and H3 footprints. Furthermore, the present results
provide evidence of the presence of an extra AP-1 site (H2) at
positions -263 to -255. Calcium-induced differentiation
of transfected keratinocytes did not affect the activity of either the
proximal promoter/enhancer or the transcriptional silencer regions,
both being capable of interacting with AP-1. Additionally, no activity
was registered with any reporter construct in fibroblasts, a cell type
that contains AP-1. Furthermore, the p220CAT construct was inactive in
transfected HeLa cells despite the interaction of AP-1 (data not
shown), suggesting that a particular combination of AP-1 may be
implicated in involucrin gene transcription. In agreement with this,
Welter et al. 1995 (43) established that Fra1, JunB,
and JunD are the factors associated to the enhancer/promoter region.
Thus, the sum of the results suggests the existence of two different
control mechanisms for involucrin gene transcription, one dependent on
AP-1 activation and the other associated with calcium-dependent
pathways. Consistent with this hypothesis, the intact 2456-nt
noncoding region is more efficient in the presence of 2 mM
CaCl Several putative binding sites for
transcriptional factors are located within the 1185-nt distal enhancer.
A detailed analysis is needed to establish the interaction and
functional value of each of these factors in the context of
calcium-induced differentiation. Ying-Yang 1 or YY1 is a zinc finger
protein related to the Krüppel family of
transcriptional regulators of Drosophila melanogaster, with
the unusual property of being able to activate or repress transcription
initiation depending on the cellular context. Moreover, YY1 binding
sites vary among cellular and viral promoters (44) . On one
hand, YY1 activates transcription of c-myc(45) ,
ribosomal proteins L30 and L32(40) , and cytochrome c oxidase genes (46) and the leaky late promoter of herpes
simplex (47) and the P6 promoter of B19
parvovirus(48) . On the other hand, YY1 represses the
regulatory regions from c-fos(49) , the skeletal
The ambivalent nature of YY1 as an activator or a silencer led to a
hypothesis concerning the importance of this factor for human
involucrin transcription. Although the abundance and function of YY1 in
human keratinocytes are not known, the current results suggest that
this factor may repress human involucrin transcription in multiplying
and calcium-treated keratinocytes. Both, the 1185-nt distal enhancer
and the 159-nt proximal enhancer/promoter are active, lacking the
624-nt fragment that contains the YY1 binding sites. Because YY1
physically interacts with other proteins(39, 54) , it
is possible that the mechanism of YY1 repression in the involucrin gene
could be the association of YY1 with the Sp-1 basal transcription
factor, whose putative binding site is present within the 159-nt
enhancer/promoter. Accordingly, the substitution of the native
involucrin TATA box with the SV40 promoter in the p610CP plasmid (that
contains several Sp-1 sites in the 21-nt repeats) showed no increase in
activity when compared with the control despite the presence of four
AP-1 sites (Fig. 1A). Site-directed mutagenesis
experiments will be required to verify such interaction. The
association between two apparently antagonistic transcriptional factors
such as AP-1 and YY1 with the involucrin 5`-noncoding region resembles
the epithelial-specific HPV-18 long control region, which also
interacts with both factors in similar tissue-specific enhancer (AP-1)
and transcriptional silencer (YY1) functions(31, 52) .
A particular combination of AP-1 containing junB is responsible for the
HPV-18 tissue-trophism(31) . Interestingly, oligonucleotides
containing an AP-1 site from HPV-18 efficiently competed for the
involucrin AP-1 complexes from the 159-nt promoter/enhancer. It has
been shown that JunB is associated with involucrin
transcription(43) . Therefore, functional association between
YY1 and junB can be proposed as a possible regulatory mechanism for
epithelial expressed genes.
Volume 271,
Number 1,
Issue of January 5, 1996 pp. 512-520
©1996 by The American Society for Biochemistry and Molecular Biology, Inc.
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
REFERENCES
treatment. Calcium-independent transcriptional activity and the
interaction with the AP-1 transcriptional factor was located on the
proximal part (nt -159 to -1) of the 5`-noncoding region.
However, CaCl
responsiveness was mapped to a distal 1185-nt
fragment (nt -2456 to -1272). Moreover, this fragment
potentiated the Herpes simplex thymidine kinase promoter in normal
keratinocytes and is responsive to calcium treatment in a cell
type-specific manner. Interestingly, the absence of a 491-nt fragment
located between the two enhancer domains (nt -651 to -160)
resulted in transcriptional activation in multiplying keratinocytes.
This fragment interacts with AP-1 and the YY1 transcriptional silencer.
It is concluded that human involucrin 5`-noncoding region contains at
least three regulatory domains, a distal CaCl
-responsive
enhancer, a putative transcriptional silencer (that interacts with AP-1
and YY1), and a proximal enhancer/promoter (that interacts with AP-1).
Thus, this study demonstrates the presence of particular
transcriptional factors can potentially regulate the human involucrin
expression.
)an AP-1 activator, moderately activates
this region in transient transfection assays using cultured rat cells.
The latter suggests that AP-1 could be necessary for involucrin
expression. Furthermore, the proximal 900-nt enhancer was activated by
overexpression of c-fos and c-jun oncogenes,
components of AP-1(11) . Treatment of normal keratinocytes with
calcium, TPA, or vitamin A
depletion(20, 21, 22, 23, 24, 25, 26) are able to increase involucrin mRNA levels. However, how
these compounds directly regulate the involucrin promoter region is not
clear.
) or differentiation (2
mM CaCl
) conditions. Involucrin transcription is
shown to be regulated by several functional elements: a distal cell
type-specific 1100-nt upstream enhancer (nt -2456 to -1272)
responsive to calcium stimulation and a possible transcriptional
silencer (nt -651 to -160) which in turn is coupled to a
proximal enhancer/promoter (nt -159 to -1/+1)
unaffected by calcium concentration. Further DNA-protein
characterization of the silencer and proximal enhancer/promoter regions
established that AP-1 and YY1 are the main transcriptional factors
interacting with these elements.
Plasmids and Oligonucleotides
The p2.6CAT
plasmid contains the entire 2456 nt from the human involucrin
5`-noncoding region of pI-3H6B plasmid (4) cloned in the
pCAT-basic vector (Promega Corp., Madison, WI) using synthetic HindIII and XbaI linkers (Fig. 1A).
p827CAT plasmid contains the polymerase chain reaction-amplified
fragment from nt -784 to 43 (with adition of HindIII
site) from the involucrin 5`-nontranscribed region of p
I3H6B
cloned in pCAT-basic. A series of nested deletions was constructed from
p827CAT, the p97CAT and p220CAT reporter plasmids contain the PstI-XbaI and ApaI-XbaI fragments,
respectively, and p610CP with the 610-nt PstI-PstI
fragment cloned in the pCAT-promoter vector (Promega Corp.), which
possesses the SV40 early promoter (Fig. 1A). The
p1.1TKM construct contains the 1185-nt HindIII-RsaI
fragment from p2.6CAT (Fig. 1A) cloned upstream the
herpes simplex type 1 thymidine kinase promoter from pTKM
vector(27) . pIN220 and pIN630 were obtained inserting the ApaI-XbaI or HindIII-ApaI fragments
from p827CAT in pUC19 (Fig. 3B).
Cell Culture
HeLa cervical carcinoma cells and
MRC-5 human fibroblasts were grown in Dulbecco's modified
Eagle's medium supplemented with 10% fetal bovine serum. The
cervical carcinoma cell line C-33A was grown in Dulbecco's
modified Eagle's medium/F-12 (1:1) medium supplemented with 7%
fetal bovine serum. Secondary cultures of neonatal human foreskin
keratinocytes were obtained essentially as described (29) and
grown in keratinocyte-SFM medium (Life Technologies, Inc.) in a 6%
CO
atmosphere. Calcium stimulation of differentiation was
performed on confluent cultures by addition of 2 mM CaCl
for 4 days to keratinocyte-SFM medium lacking epidermal growth
factor and bovine pituitary extract.Transient Transfections and CAT Assays
Normal
human keratinocytes cultures, 60-70% confluent in 100-mm tissue
culture dishes, were transfected with 10 µg of total plasmid DNA
using Lipofectin (Life Technologies, Inc.) as described
previously(30) . MRC-5 fibroblasts were transfected using
Lipofectamine (Life Technologies, Inc.) using the same protocol. C-33A
cells in 60-mm dishes were transfected using the calcium phosphate
method as described previously(31) . For keratinocyte
differentiation conditions, the culture medium was replaced with
keratinocyte-SFM lacking epidermal growth factor and bovine pituitary
extract with 2 mM CaCl
12 h post-transfection.
Cells were harvested 48 h post-transfection in TEN buffer (40 mM Tris-HCl, pH 8.0, 1 mM EDTA, 15 mM NaCl) and
lysed with three freeze-thaw cycles in 0.25 M Tris-HCl, pH
8.0; protein was quantified employing the Bradford method (32) . Standardized amounts of lysate protein were incubated
with 0.25 µCi of [
C]chloramphenicol (50
mCi/mmol, Amersham Corp.) and 0.66 mM acetyl-CoA (Sigma) in a
final volume of 115 µl. The acetylation reactions were carried out
at 37 °C for up to 4 h. The samples were extracted with ethyl
acetate (J.T. Baker Inc.) and loaded in TLC plates (Sigma).
Chromatography was developed with chloroform:methanol (19:1) and
exposed to Hyperfilm radiographic films (Amersham Corp.). Radioactive
spots were quantified in a Beckman LS6000SC scintillation counter. When
comparing different cell lines and transfection methods, CAT activities
from MRC-5 and C-33A cells were standardized relative to the SV40
enhancer/promoter that is active in all cell types tested. Otherwise,
CAT activities are expressed as the acetylated fraction corrected for
the activity of the pCAT-basic vector.Nuclear Extract Preparation
Nuclear extracts were
prepared as described previously(33) . All buffers were freshly
prepared and contained the protease inhibitors aprotinin, leupeptin,
antipain, chymostatin, pepstatin (5 µg/ml each), and benzamidine (2
mM) to prevent nuclear factor proteolysis (Sigma). Protein
concentration was measured as indicated before (32) .Gel-shift Assays
Nuclear extracts from
keratinocytes or HeLa cells were incubated on ice with 0.5-1
µg of poly[d(I-C)] (Pharmacia Biotech Inc., Alameda, CA)
and 1 ng of P-end-labeled DNA in 2
BDG buffer (24
mM HEPES, pH 7.8, 20% glycerol, 0.1 mM EDTA, 8
mM MgCl
, 20 mM KCl, 2 mM dithiothreitol, 4 mM spermidine). The reaction mixtures
were electrophoresed in low ionic strength 0.5 TBE buffer (44.5
mM Tris-HCl, pH 7.9, 44.5 mM boric acid, 1 mM EDTA) 4 or 6% polyacrylamide gels at 150 V. The gels were dried
and exposed to Kodak X-Omat radiographic films. For competitive
studies, the reaction mixtures were preincubated with different amounts
of unlabeled competitor oligonucleotide before the addition of labeled
DNA. For gel supershift experiments, reactions with the DNA-protein
complexes were incubated at 4 °C with anti-c-jun/AP-1
(sc-44; Santa Cruz Biotechnology, Santa Cruz, CA) or anti-HPV16 E7
rabbit polyclonal antibodies for 6 h prior electrophoresis.
DNase I
Footprinting
EcoRI-HindIII fragments from
pIN220 and pIN630 plasmids (Fig. 3B) were
asymmetrically end-labeled with either
[-
P]ATP and T4 polynucleotide kinase (New
England Biolabs, Beverly, MA) or [
-P]dATP
and DNA polymerase I Klenow fragment (Boheringer Mannheim) and isolated
through preparative 6% acrylamide gel electrophoresis. A standard DNA
binding reaction was performed using 20-40 µg of total
nuclear extract in 20 µl final volume. DNase I (Boheringer
Mannheim) digestion was performed at 20 °C with empirically
determined concentrations and stopped using 600 µg/ml proteinase K
(Boheringer Mannheim) 1 h at 42 °C. The nucleic acids were
phenol-extracted and precipitated with ethanol. The pellets were washed
with 70% ethanol and dissolved in gel loading buffer (80% formamide,
0.1% bromphenol blue, 0.1% xylene-cyanol) and denatured 5 min at 95
°C prior electrophoresis through 6% polyacrylamide, 7 M
urea sequencing gels.
The Human Involucrin Gene 5`-Noncoding Region Contains
Several Transcriptional Regulatory Domains
The transcriptional
regulation of the human involucrin gene was analyzed employing deletion
constructs derived from p2.6CAT plasmid which express the CAT reporter
gene under the control of the intact 5`-noncoding region (2456 nt).
p2.6CAT activity in multiplying normal keratinocytes was
significatively higher to that obtained with p97CAT and p827CAT
constructs which contain the minimal promoter and the proximal 784 nt
from the human involucrin 5`-noncoding region, respectively (Fig. 1A). These results suggest the presence of a
distal enhancer element located in the 1185-nt HindIII-RsaI fragment of p2.6CAT. Cloning of this
fragment in front of the herpes simplex TK promoter (p1.1TKM) and
transfection of multiplying keratinocytes caused a 20-fold increase in
CAT activity relative to pTKM plasmid, thus confirming the presence of
a transcriptional enhancer (Fig. 1A). Interestingly,
the relatively high activity observed in p1.1TKM compared with that
obtained for p2.6CAT suggests the presence of a potential
transcriptional silencer (Fig. 1A).
concentration to 2 mM in the absence of
epidermal growth factor and bovine pituitary extract (Fig. 2A). These conditions stimulate 3-5-fold
the transcription of the involucrin gene(34) . However,
activity of p97CAT, p220CAT, and p827CAT remained unchanged (Fig. 2A). Therefore, the calcium responsiveness should
reside in the distal 1185-nt enhancer. To test this, the p1.1TKM
construct was also transfected in normal keratinocytes under
multiplying and differentiation conditions resulting in a significant
increase on the p1.1TKM activity in calcium-treated keratinocytes (Fig. 2B).
) or after
differentiation induction (2 mM CaCl
) conditions
as described under ``Materials and Methods.'' Cell extracts
were obtained 48 h post-transfection. Representative CAT chromatograms
from three independent experiments are shown. pCAT-basic and
pCAT-control vectors were used as negative and positive controls,
respectively. B, calcium responsiveness resides in the distal
enhancer. pTKM and p1.1TKM plasmids (10 µg) were transfected into
keratinocytes and processed as described above. The average CAT
activities relative were obtained from three independent
experiments.
Footprinting Analysis of the Human Involucrin Gene
Proximal Promoter/Enhancer
The complete nucleotide sequence
of the 2456-nt 5`-noncoding region revealed several putative
transcriptional factor binding sites (Fig. 3A). AP-1,
YY1, and TBP binding sites were located within the proximal
enhancer/promoter and the putative transcriptional silencer domains (Fig. 3A). As a part of the analysis of the involucrin
transcriptional regulation, DNase I footprinting assays were performed
to detect nuclear factors capable of specifically interacting with
these domains. Nuclear extracts from multiplying or 2 mM CaCl
treated human keratinocytes and HeLa cells were
incubated with end-labeled EcoRI-HindIII fragments
from pIN220 plasmid, which spans the proximal enhancer/promoter domain (Fig. 3B). The DNase I digestion patterns had several
protected regions designated HP-1/HP-2 (nt -116 to -26),
HP-3 (nt -139 to -119), and HP-4 (-156 to -143)
separated by sites of enhanced DNase I sensitivity readily observable
in both strands (Fig. 4A, black arrows). No noticeable
difference was seen in the footprint patterns produced by nuclear
extracts from multiplying or 2 mM CaCl
treated
keratinocytes or from HeLa cells.
-induced (Ki) human keratinocytes or HeLa
cells were incubated with the end-labeled EcoRI-HindIII fragment from pIN220 plasmid for DNase
I footprinting as described under ``Materials and Methods''
and electrophoresed in 6% sequencing gels. Brackets show the
regions covered by the HP-1, HP-2, HP-3, and HP-4 footprints in the
upper and lower DNA strands. Numbers on the left side show the nucleotide position in the human involucrin 5`-noncoding
region sequence. F, DNase I digestion pattern of the free
probe. Pu, purine chemical cleavage ladder. Triangles indicate DNase I hypersensitive sites. B, AP-1
competition footprint analysis. The labeled EcoRI-HindIII pIN220 DNA fragment was incubated with
40 µg of human multiplying keratinocytes nuclear extract.
Competition was performed by adding 0.5 and 1.0 µg of nonlabeled
oligonucleotide containing a consensus AP-1 binding site (Table 1) to the binding reaction for 10 min before incubation
with DNase I. The relative location of the HP-2 and HP-3 footprints is
indicated by brackets. Triangles show recovered
sites. Pu, purine sequence ladder.
AP-1 Binds to the Human Involucrin Proximal
Enhancer/Promoter
Sequence analysis of the footprints
produced by keratinocyte nuclear proteins indicates the presence of
three potential 5`-TGAC/GTCA-3` AP-1 binding sites coincident with HP-2
and HP-3 footprints(11, 36, 37) . To examine
whether the nuclear factors associated with HP-2 and HP-3 footprints
indeed correspond to AP-1-related proteins, gel-shift competition
assays were done with nuclear extracts from human keratinocytes
cultures and with and without 2 mM CaCl
and the EcoRI-HindIII fragment from pIN220 as a probe. The
complexes were efficiently competed by a 100-fold molar excess of
nonlabeled wild-type AP-1 competitor oligonucleotide (AP-1) but not by
a 200-fold molar excess of a mutated AP-1 (AP-1M) or adenovirus NF-1
(NF-1) binding sites (Fig. 5A and Table 1).
Similar results were obtained using nuclear extracts from HeLa cells
(data not shown).
P-end-labeled HindIII-EcoRI fragment from pIN220 plasmid with 8
µg of total nuclear extracts from multiplying (Ker) or 2
mM CaCl
-induced (Ki) human keratinocytes
on ice in the presence of 1 µg of poly[d(I-C)] as
unspecific carrier. Competitions were performed by adding 100 and 200
molar excesses of the indicated nonlabeled competitor oligonucleotides
before electrophoresis in 4% low ionic strength nondenaturing
polyacrylamide gels. Arrows indicate the AP-1-specific
retarded complexes. B, gel supershift experiments were done by
incubating on ice the above described binding reaction mixture with 2
µg of anti-c-jun/AP-1 sc-44 or anti-HPV16 E7 polyclonal
antibodies for 6 h prior electrophoresis. The positions of the AP-1
shifted and supershifted complexes are indicated by arrows.
-treated keratinocytes
(data not shown). Thus, it is concluded that AP-1 is the nuclear factor
from normal keratinocytes associated with the proximal 159-nt
enhancer/promoter.Footprint Analysis of the Human Involucrin
Transcriptional Silencer
The nature of the nuclear factors
associated with the transcriptional silencer region found in p827CAT
construct was investigated using the cloned HindIII-ApaI 624-nt fragment in the pIN630 plasmid (Fig. 3B) and nuclear extracts from multiplying or
CaCl
-treated keratinocytes and HeLa cells. Footprinting
analysis revealed four protected regions, H1 (nt -222 to
-166), H2 (nt -287 to -235), H3 (nt -313 to
-292), and H4 (nt -387 to -317), respectively (Fig. 6). The overall footprinting pattern obtained with nuclear
extracts from keratinocytes with and without CaCl
treatment
was similar, although a distinct reproducible difference occurred in
the upper strand H4 footprint (Fig. 6). Interestingly, the
sequence protected by H4 footprint contains a sequence track homologous
to binding sites for the YY1 factor(38, 39) . Distinct
differences between keratinocytes and HeLa cells nuclear extracts were
also noticed in H3 and H4 footprints (Fig. 6). H1 and H2
footprints displayed similar patterns for all nuclear extracts employed
but with slight differences in the size of the protected zone for both
strands (Fig. 6). The location of the H2 footprint in a DNA
segment containing a putative AP-1 site suggests that AP-1 could also
interact with this region.
-treated (Ki)
keratinocytes and HeLa cells were incubated with the end-labeled EcoRI-HindIII fragment from pIN630 plasmid as in Fig. 4A. Footprints H1, H2, H3, and H4 in upper and
lower DNA strands are defined with brackets. Triangles indicate DNase I hypersensitivity sites (closed) and
changes in footprint pattern (open). The nucleotide sequence
number is on the left side. Free probe DNase I digestion
patterns for 60 and 70 s are shown in F and F` lanes
of the upper DNA strand, respectively. Pu, purine chemical
cleavage ladders.
Differential Nuclear Factor Binding in the Involucrin
Gene Putative Transcriptional Silencer
Synthetic
oligonucleotides containing the H1, H2, and H3 footprints from the
pIN630 plasmid (Fig. 3B and Table 1) were used to
identify the associated nuclear factors as well as possible cell type-
and stage-specific variations in standard gel-shift assays. To
facilitate analysis, the H4 footprint was spliced into three different
oligonucleotides H4 2072, H4, and H4 2126 (Table 1). Several
retarded complexes were noticed using both multiplying and
calcium-induced keratinocytes nuclear extracts. The specificity of the
DNA-protein interactions was tested by preincubating the nuclear
extracts with a 100-fold molar excess of unlabeled homologous probe (Fig. 7). For H1 and H4 oligonucleotides, no specific
competition was noticed when using the binding sites of AP-1, NF-1, and
YY1 (data not shown). H1 and H2 oligonucleotides presented single
band-specific retarded complexes, suggesting that only one factor may
be implicated in these interactions (Fig. 7, panels H1 and H2). The specific retarded complex from H1 displayed
a 2-3-fold increase in intensity with nuclear extracts derived
from CaCl
-treated keratinocytes, but no noticeable
difference was found for the H2-retarded complex (Fig. 7, panels H1 and H2).
-treated (Ki) keratinocytes
with 1 ng of end-labeled oligonucleotides containing the H1, H2, H3,
and H4 footprint sequences (Table 1) from pIN630 (panels H1,
H2, H3, and H4, respectively). The binding reactions were
done as described in the legend to Fig. 5A.
Competitions were performed with 100 molar excess of competitor
oligonucleotide before electrophoresis 6% nondenaturing low ionic
strength polyacrylamide gels. Arrows indicate the position of
specific retarded complexes.
-treated keratinocytes (Fig. 7, panel
H3). H4 oligonucleotide had two specific DNA-protein complexes
with either nuclear extract, suggesting the interaction of multiple
nuclear factors with this sequence (Fig. 7, panel H4).
-treated keratinocytes (Ki)
or HeLa cells were used in gel-shift assays with the H1, H2, H3, and H4
oligonucleotides as described in the legend to Fig. 5A (panels H1, H2, H3, and H4, respectively). The
keratinocyte (black arrows) and the differential HeLa cells (open arrows) complexes are shown.
AP-1 and YY1 Transcriptional Factors Interact with the
Human Involucrin Putative Transcriptional Silencer
As with
pIN220, several potential AP-1 binding sites were found within the
pIN630 fragment (Fig. 3A). Three of them coincide with
the observed footprints H1, H2, and H3. Gel-shift competition
experiments using nuclear extracts from multiplying keratinocytes
demonstrated that only the H2 DNA-protein complex is efficiently
competed by a 30-fold molar excess of AP-1 homologous competitor (Fig. 9A). Similar results were obtained with HeLa and
CaCl
-treated keratinocytes (data not shown). A 100-fold
molar excess of either AP-1M or NF-1 competitor oligonucleotides had no
effect on the H2 complex (Fig. 9A).
-treated keratinocytes (Ki) and HeLa cells with the H2-end-labeled oligonucleotide in
the presence of rabbit polyclonal sc-44 (anti-c-jun/AP-1) or
anti-HPV-16 E7 antibodies. The arrows show the position of the
H2-AP-1 and supershifted complexes.
-treated keratinocytes
and HeLa cells nuclear extracts. The H2 complex intensity was
simultaneously reduced with the appearance of a supershifted complex
only after addition of an anti-AP-1 antibody to the binding mixture,
verifying that the H2 footprint indeed corresponds to AP-1 (Fig. 9B).
. The enhanced activity requires the far upstream 1648
nt that includes the distal 1185-nt enhancer domain described in this
work. Thus, the AP-1- and calcium-dependent involucrin regulatory
pathways are apparently functionally and physically separable within
the 5`-noncoding region.
-actin(50) , human immunodeficiency virus type
1(51) , HPV-18 long control region(52) , and the human
cytomegalovirus major immediate early enhancer/promoter(53) .
)
We thank Dr. Joseph A. DiPaolo for critical review of
the manuscript and Dr. Howard Green and Dr. Francoise Thierry for the
gift of pI3H6B and pTKM plasmids, respectively. We also thank
Leticia Gonzalez-Maya and Maria Teresa Hernandez for cell culture and
Irma Castelan for gift of HPV-16 anti-E7 antibody.
©1996 by The American Society for Biochemistry and Molecular Biology, Inc.
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