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Volume 271,
Number 16,
Issue of April 19, 1996 pp. 9473-9482
©1996 by The American Society for Biochemistry and Molecular Biology, Inc.
Equilibrium
Studies of Kinesin-Nucleotide Intermediates (*)
(Received for publication, September
15, 1995; and in revised form, January 17, 1996)
Steven
S.
Rosenfeld
(1), (2), (§),
Brenda
Rener
(1),
John
J.
Correia
(5),
Matthew S.
Mayo
(4),
Herbert C.
Cheung
(3)From the
(1)Departments of Neurology,
(2)Cell Biology, and
(3)Biochemistry and the
(4)Division of Biostatistics, UAB Comprehensive
Cancer Center, University of Alabama at Birmingham, Birmingham, Alabama
35294 and the
(5)Department of Biochemistry, University of
Mississippi Medical Center, Jackson, Mississippi 39216
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
REFERENCES
ABSTRACT
We have examined the energetics of the interactions of two
kinesin constructs with nucleotide and microtubules to develop a
structural model of kinesin-dependent motility. Dimerization of the
constructs was found to reduce the maximum rate of the
microtubule-activated kinesin ATPase 5-fold. Beryllium fluoride and
aluminum fluoride also reduce this rate, and they increase the affinity
of kinesin for microtubules. By contrast, inorganic phosphate reduces the affinity of a dimeric kinesin construct for
microtubules. These findings are consistent with a model in which the
kinesin head can assume one of two conformations, ``strong''
or ``weak'' binding, determined by the nature of the
nucleotide that occupies the active site. Data for dimeric kinesin are
consistent with a model in which kinesin ATP binds to the
microtubule in a strong state with positive cooperativity; hydrolysis
of ATP to ADP+P leads to dissociation of one of the
attached heads and converts the second, attached head to a weak state;
and dissociation of phosphate allows the second head to reattach. These
results also argue that a large free energy change is associated with
formation of kinesin ADP P and that this step is
the major pathway for dissociation of kinesin from the microtubule.
INTRODUCTION
Molecular motors power a wide variety of physiologically
important motile processes. These include movements of intracellular
organelles, of chromosomes during mitosis and meiosis, and of
cytoskeletal components during the process of ameboid motion (Vallee
and Shpetner, 1990; Endow and Titus, 1992). These enzymes can be
broadly classified into two categories: the myosins, which generate
movement along actin-containing microfilaments; and a group of
microtubule-based motors that include cytoplasmic dynein and the
kinesin family of mechanoenzymes (Endow and Titus, 1992). The myosins
remain the best studied group of molecular motors, and much effort has
gone into identifying which of the steps in the actomyosin ATPase cycle
are responsible for force generation. Studying the nature of these
myosin-nucleotide intermediate states has been facilitated by the use
of transition metals, which bind to myosin ADP stoichiometrically
and with high affinity (Goodno, 1979; Phan and Reisler, 1992; Maruta et al., 1993). Complexes of these metals with myosin ADP
appear to mimic either the myosin ATP or
myosin ADP P structures (Fisher et al.,
1994). Thus, aluminum fluoride appears to induce a prehydrolytic
myosin-nucleotide transition state, whereas beryllium induces a
myosin ATP structure (Fisher et al., 1994). The stability
of these complexes has allowed their study with spectroscopic, NMR, and
crystallographic methods and has provided insight into the structure of
the short lived myosin ATP and myosin ADP P intermediates. The validity of their use in studying
myosin-nucleotide intermediates has also been supported by the effects
of inorganic phosphate. Phosphate can bind to the active site of
myosin ADP to generate a myosin ADP P state,
and it has effects that are physiologically similar to those of
vanadate and aluminum fluoride in reducing the affinity of
myosin ADP for actin (Dantzig and Goldman, 1985). Compared with
the myosins, the kinesin family of microtubule motors appears to have
to comply with a different set of physiologic constraints. Kinesin
powers movement of organelles along microtubules and, unlike myosin,
appears to operate in isolation (Walker and Sheetz, 1993). Motility
studies in vitro are consistent with this assignment of
function, as single kinesin molecules are able to translocate along
microtubules for several micrometers at maximal velocity without
detaching (Howard et al., 1989). These differences in
physiology suggest that the nature of the force-generating
transition(s) in the kinesin-microtubule ATPase cycle may likewise be
different. Support for this comes from an in vitro motility
study (Romberg and Vale, 1993) which demonstrated that ATP S, ( )vanadate, and aluminum fluoride prolonged the lifetime of
attachment of kinesin to the microtubule; and increasing concentrations
of ADP shortened this lifetime. These findings were interpreted to mean
that the kinesin ADP P state (presumably mimicked
by aluminum fluoride, vanadate, and ATP S) was strongly bound,
whereas the kinesin ADP state was weakly bound. However, more
recent kinetic studies (Gilbert et al., 1995) of the kinesin
ATPase cycle could be explained by either of two models. In one,
dissociation of the kinesin-microtubule complex occurs in the
kinesin ADP P state, suggesting that this state
may be weakly bound, whereas in the other, dissociation occurs
in a transition involving a kinesin ADP intermediate state:

where K is kinesin, M is microtubule, T is ATP, and D is ADP. Determining which of the above models is the most accurate depiction
of the kinesin ATPase cycle requires direct measurements of the binding
affinities of the various kinesin-nucleotide intermediate states and
the equilibrium constants for the various kinesin-nucleotide
transitions. Efforts in this regard have been made by several
laboratories, which have examined the steady and pre-steady-state
kinetics of these transitions by utilizing bacterially expressed
recombinant fragments of kinesin which contain the amino-terminal motor
domain and variable amounts of the carboxyl-terminal tail (Huang and
Hackney, 1994; Huang et al., 1994; Hackney, 1994a, 1994b;
Gilbert and Johnson, 1993, 1994; Gilbert et al., 1995; Ma and
Taylor, 1995a, 1995b). These studies have confirmed previous
observations using intact kinesin and have extended them by
demonstrating that: 1) ATP binding, hydrolysis, and phosphate release
are rapid relative to subsequent steps in the hydrolysis cycle; 2)
kinesin ADP is the predominant species in the system, and release
of ADP is the rate-limiting step; 3) microtubules accelerate ADP
release several thousandfold; and 4) for dimeric kinesin constructs
that contain ADP in the active site, microtubules accelerate release of
only one of the two bound ADP molecules. However, these studies have
not measured binding affinities of stable kinesin ATP and
kinesin ADP P intermediates and are thus not able
to assign microtubule affinities reliably to several of the
kinesin-nucleotide states depicted above. In this study, we have
generated two bacterially expressed constructs of human kinesin and
examined the effects of ADP, aluminum fluoride, beryllium fluoride, and
inorganic phosphate on their binding affinities and steady-state ATPase
parameters. These studies indicate that ternary complexes of
kinesin ADP with salts of aluminum and beryllium mimic the
kinesin ATP state, which is strong binding; that inorganic
phosphate reduces the affinity of dimeric kinesin ADP for
microtubules; and that the dissociation of the
kinesin ADP P complex from microtubules
represents the major dissociation step in the kinesin-microtubule
ATPase mechanism.
EXPERIMENTAL PROCEDURES
MaterialsOligonucleotides used in the
polymerase chain reaction were synthesized by Oligos Etc. (Guilford,
CT) and Cruachem (Sterling, VA). Restriction enzymes and modifying
enzymes were obtained from Stratagene, Inc. (La Jolla, CA) and Life
Technologies, Inc. Taq polymerase was also supplied by Life
Technologies, Inc. Media components were obtained from Difco
Laboratories. Protease inhibitors, antibiotics, GTP, malachite green
oxalate, Triton X-100, and chemicals used for buffers and agarose gel
electrophoresis were obtained from Sigma.
Isopropyl- -D-thiogalactopyranoside was obtained from
Fisher Scientific. Ribonuclease A and deoxyribonuclease I were
purchased from U. S. Biochemical Corp. Prepacked Q-Sepharose columns,
protein assay dye reagent, and chemicals used in sodium dodecyl
sulfate-polyacrylamide gel electrophoresis were from Bio-Rad. Ni-NTA
agarose was obtained from Qiagen (Chatsworth, CA). Centriprep-10
concentrators were obtained from Amicon, Inc. (Cherry Hill, NJ). N-Succinimidyl [2-3- H]propionate,
was purchased from American Radiolabeled Chemicals, Inc. (St. Louis,
MO). Taxol was generously provided by Nancita Lomax of the Drug
Synthesis and Chemistry Branch, Division of Cancer Treatment, National
Cancer Institute. mant and 2`-deoxy mant nucleotides were synthesized
from the unlabeled nucleotides as described (Hiratsuka, 1983) and
purified by chromatography in water on Sephadex LH-20.
Kinesin Expression in Escherichia coli and Purification
of Recombinant ProteinspXPE plasmid DNA encoding human kinesin
was kindly provided by Dr. Ron Vale (described in Navone et
al., 1992). DNA fragments encoding the first 413 amino acids
(K413) and the first 332 amino acids (K332) of human kinesin were
generated by polymerase chain reaction using the following
oligonucleotide primers. The amino-terminal primer for both K413 and
K332 was 5`-GCGGACCTGGCCGAGTGCAACATC-3`. The carboxyl-terminal primer
for K413 was 5`-GGTACTCGAGAAAATTTCCTATAACTCCA-3`, containing an XhoI restriction site. The carboxyl-terminal primer for K332
was 5`-GGTACTCGAGATTGACACAAACTGTGTTC-3`, containing an XhoI
restriction site. Each DNA fragment was ligated to the vector pET-21d
(Novagen, Madison, WI), which had been digested with NcoI and
repaired. This vector generates a fusion protein in which the kinesin
insert is fused at the carboxyl terminus to a sequence of six histidine
residues, which allows for affinity purification on Ni-NTA agarose (see
below). The ligation mixtures were used to transform E. coli DH5F` as described (Sambrook et al., 1989). DNA from
these clones was prepared by a modification of the alkaline lysis
minipreparation method, restriction digested, and analyzed by agarose
gel electrophoresis. Positive DNA was used to transform E. coli BL21(DE3) as described (Sambrook et al., 1989) for
expression of each recombinant protein. Transformants were selected on
plates of LB with 100 µg/ml ampicillin. For purification of
protein, 10 liters of culture were grown at 37 °C and 300 rpm in LB
with 100 µg/ml ampicillin to an absorbance at 595 nm of 0.6.
Cultures were induced for 4 h by the addition of
isopropyl- -D-thiogalactopyranoside to 0.5 mM.
Cells were harvested by centrifugation and stored at -70 °C.
The frozen cells were thawed and resuspended in 3 ml of cold lysis
buffer (50 mM Tris, pH 7.9, 10% sucrose, 0.3 M NaCl,
5 mM MgCl , 0.5 mM MgADP, 1 mM phenylmethylsulfonyl fluoride, 2 µg/ml aprotinin, 2 µg/ml
leupeptin, 1 µg/ml pepstatin A)/g of cells. Lysozyme was added to 1
mg/ml, and the suspension was kept on ice for 30 min with occasional
mixing. The sample was sonicated to shear the DNA. Ribonuclease A was
added to 10 µg/ml, deoxyribonuclease I was added to 5 µg/ml,
and the suspension was incubated at room temperature for 30 min. The
sample was clarified by centrifugation at 27,000 g for
20 min. The clarified sample was passed through a 0.45-µm filter.
Twelve ml of a 1:1 suspension of Ni-NTA agarose preequilibrated in
lysis buffer was added to the clarified lysate. The sample was mutated
at 4 °C for 2 h. The resin was pelleted and loaded into a 0.5
30-cm column at 4 °C. The column was washed for 3 h at 0.5
ml/min with wash buffer (20 mM Tris, pH 7.9, 40 mM imidazole, 0.5 M NaCl, 5 mM MgCl ,
0.5 mM MgADP, 1 mM phenylmethylsulfonyl fluoride).
The desired protein was eluted with a 50-ml gradient of 40
mM-0.5 M imidazole in wash buffer. One-ml
fractions were collected, and uv-absorbing fractions were pooled.
Typical yields were 2-3 mg of protein/liter of cells. Purity was
assessed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis,
which revealed a single band on Coomassie-stained gels. Samples were
dialyzed against 20 mM HEPES, 50 mM potassium
acetate, 5 mM MgCl , 1 mM DTT, 1 mM MgADP, 1 mM NaN , pH 7.20, and stored at
-70 °C until use. Samples were used within 24 h after
thawing.
Sedimentation Velocity ExperimentsSedimentation
velocity experiments were conducted on a Beckman Optima XLA analytical
ultracentrifuge equipped with absorbance optics and an An60Ti rotor as
described (Correia et al., 1995). These experiments were done
at 42,000 rpm, 24.6 °C in charcoal-filled Epon double-sector
centerpieces. Velocity data were collected at an appropriate wavelength
(232-237 or 280 nm, depending on the initial concentration) and
at a spacing of 0.01 cm with four averages in continuous scan mode. The
data were analyzed as described (Correia et al., 1995).
Preparation of Tubulin and MicrotubulesBovine
brain microtubules were prepared by two cycles of temperature-dependent
polymerization and depolymerization (Shelanski et al., 1973).
Tubulin was purified further by phosphocellulose chromatography, as
described (Weingarten et al., 1975; Sloboda et al.,
1976). Aliquots of tubulin which were frozen at -80° C were
thawed. PIPES was added to 100 mM, and MgSO was
added to 5 mM. GTP (from a frozen stock of 50 mM in
water, pH 7.0) was added to 1 mM. The tubulin was allowed to
polymerize at 35 °C for 20 min. Taxol was added to 100
µM, and polymerization was allowed to continue for 15 min.
The sample was spun in a microcentrifuge for 30 min at 4 °C. The
supernatant was discarded and the pellet resuspended in ATPase buffer
(20 mM HEPES, 5 mM MgCl , 50 mM potassium acetate, 1 mM DTT, 1 mM NaN , pH 7.2) plus equimolar taxol. The suspension was
left at 35 °C for 30 min and then centrifuged for 30 min at room
temperature. The supernatant was discarded and the pellet resuspended
as above. This procedure was repeated one more time to ensure that no
free phosphate remained in the sample. The concentration was determined
using Bio-Rad protein assay dye reagent.
ATPase AssaysA modification of the malachite
green method (Kodama et al., 1986) was used for the detection
of inorganic phosphate in ATPase assays. A solution containing K332 or
K413 and varying concentrations of microtubules in ATPase buffer was
combined for a total volume of 225 µl and allowed to sit in a 25
°C water bath for 1 h. Samples were assayed for ATPase activity.
2.25 µl of 50 mM MgATP in water was added, and the
reaction was allowed to proceed for the desired length of time. The
reaction was stopped by adding 225 µl of ice-cold 0.6 M perchloric acid. Samples were spun in a microcentrifuge for 4 min
to pellet the precipitated protein. 400 µl of supernatant was
transferred to a tube containing 400 µl of color development
reagent (0.2% sodium molybdate, 0.03% malachite green oxalate, and
0.05% Triton X-100 in 0.7 M HCl) at 30-s intervals. Each
sample's absorbance at 650 nm was read exactly 10 min after the
addition of the color development reagent. The amount of inorganic
phosphate was determined from a standard curve, and the ATPase rates
were calculated.Data for K332 ATPase rate versus microtubule concentration were fit to the Michaelis-Menten
equation to determine k and K . For K413, rate versus microtubule
concentration data had to be corrected for the percentage of K413 which
was monomeric, by fitting the ATPase rate, , to

where is the fraction of K413 which is monomeric, 1
- is the fraction which is dimeric, and M is the
concentration of tubulin dimer. The value of was determined by
equilibrium sedimentation studies of K413 which will be reported
elsewhere. ( )The values of K and k for monomeric K413 were determined by
measuring microtubule-activated ATPase activity at a K413 concentration
of 50 nM, where the construct is >95% monomeric.
Mant ADP, Mant AMPPNP Binding AssaysBinding
of mant ADP and mant AMPPNP to K413 was determined by a dialysis
method. K413 in ATPase buffer was made nucleotide-free as described
previously (Sadhu and Taylor, 1992) by the addition of EDTA to 10
mM, incubation at room temperature for 15 min, followed by gel
filtration on Sephadex G-25 (PD-10, Pharmacia) which had been
equilibrated in 20 mM HEPES, 50 mM potassium acetate,
0.1 mM EDTA, 1 mM DTT, 1 mM NaN ,
pH 7.20. Magnesium chloride was immediately added to 5 mM, and
mant AMPPNP or mant ADP was added over a range of concentrations to
samples of K413 at a concentration of 2 µM. Samples were
briefly sedimented in Centriprep-10 concentrators, during which time
approximately 10% of the volume had filtered through the semipermeable
membrane. Equal volumes of filtrate (containing free nucleotide) and
retentate (containing total nucleotide) were diluted into 2.0 ml of 6 M urea, 25 mM HEPES, 0.1 mM EGTA, pH 7.5,
and the fluorescence of the samples was measured in an Aminco SLM 8000
fluorescence spectrophotometer. Fluorescence intensity was converted to
concentration of nucleotide by comparing with the fluorescence of a
series of samples of defined nucleotide concentration. The standard
curve remained linear throughout the range of concentrations examined.
Free and bound nucleotide concentrations were calculated, and
equilibrium data were calculated by Scatchard analysis, using a
plotting program (DeltaGraph 3.5).The effect of EDTA treatment on
nucleotide binding stoichiometry was measured independently for K413 by
the following experiment. Twenty µM K413 in ATPase buffer
was incubated with a 30-fold molar excess of mant ADP for 4 h at 4
°C. The sample was dialyzed against 1,000 volumes of ATPase buffer,
and the remaining mant ADP was removed followed by gel filtration on
Sephadex G-25 (PD-10), which had been equilibrated in ATPase buffer.
The concentration of K413 was measured by its absorbance at 280 nm,
calculated from its amino acid composition ( = 33,650 M cm ; Gilbert and Johnson(1993)), and the
concentration of mant ADP was measured by its absorbance at 356 nm
( = 5,800 M cm ; Hiratsuka(1983)).
H Labeling of Kinesin10 µCi of N-succinimidyl [2,3- H]propionate (80
Ci/mmol) was spotted on a wedge of filter paper and air dried in an
Eppendorf tube. 500 µl of K413 or K332 in 20 mM HEPES, 5
mM MgCl , 50 mM potassium acetate, 0.1
mM EGTA, 1 mM NaN , pH 7.20, was added to
the label and incubated at 4 °C for 4 h. Unreacted label was
removed by gel filtration of the protein on Sephadex G-25 (PD-10).
Labeling stoichiometry, determined from the specific activity and
protein concentration, was less than 1 mol of label/1,000 mol of
protein.
Microtubule Binding Assay H-Labeled
kinesin at a concentration of 50-250 nM was combined
with varying concentrations of a >15-fold excess of microtubules in
a final volume of 220 µl in 20 mM HEPES, 5 mM MgCl , 50 mM potassium acetate, 1 mM NaN , pH 7.20. For studies of binding in the presence
of ADP, 1 mM MgADP was added to the sample mixture. Samples
were equilibrated at 25 °C for 60 min in the presence of 0.5%
bovine serum albumin, loaded into Beckman Airfuge centrifuge tubes, and
sedimented at 125,000 g for 20 min. 190 µl of
supernatant was placed in 3.0 ml of scintillation fluid (Opti-fluor,
Packard) and counted. Counts were normalized by comparing with kinesin
samples sedimented in the absence of microtubules. Sedimentation of
labeled K413 or K332 in the absence of microtubules reduced the
concentration of kinesin in the supernatant by less than 5%.Binding
data for K332 could be fit to a binding isotherm of the form

where is the fractional binding, defined as the ratio of
sedimented K332 to total K332,  is the maximum
degree of binding, K is the association constant,
and [M] is microtubule concentration. For K413 ADP
± beryllium fluoride, fitting required a correction for the
fraction of K413 which is dimeric versus monomeric. This was
accomplished by utilizing data from equilibrium sedimentation
studies. Data were fit to , which assumes: 1)
that the fraction of K413 that is monomeric ( ) binds to the
microtubule with affinity K , determined by
measuring microtubule binding affinity at low K413 concentration, where
the construct is monomeric; 2) that the fraction of K413 which is
dimeric is 1 - ; 3) that each head of a free dimeric K413
molecule can bind to the microtubule affinity constant K ; and 4) that binding of the second head to the
microtubule occurs with affinity constant K .
, the fractional binding of K413, is defined as the ratio of
unsedimented K413 to total K413. Under these conditions, the degree of
binding, , is determined by the fractional binding of the
monomeric and dimeric species.

Expressing these quantities in terms of the various affinity
constants reveals the following (Tanford, 1961).

The validity of using values of in which
were derived from equilibrium sedimentation studies was tested by
setting as an independent variable in fitting to for the data in Fig. 3A. The value of
derived by this method for K413 ADP at a concentration of
250 nM ( = 0.62, r =
0.96) was very close to that derived from equilibrium studies (
= 0.60; Footnote 2). Free energies of binding for dimeric K413
were calculated using the microscopic binding constant, K,
whose relationship to the individual macroscopic binding constants, K ,in is as follows (Tanford, 1961)

Figure 3:
Fractional binding versus tubulin
dimer concentration for kinesin constructs. Panel A, K413 at
250 nM (closed squares), 50 nM (open
triangles), and 250 nM K413 + 1 mM BeSO + 5 mM NaF (closed
circles). Data for K413 at 50 nM fit a rectangular
hyperbola, which defines a value of K of
7.8 µM and stoichiometry of 0.9. Conditions: 20 mM HEPES, 50 mM potassium acetate, 5 mM MgCl , 1 mM DTT, 1 mM NaN , 1 mM MgADP, pH 7.20, 25 °C. Data for
K413 ADP ± beryllium fluoride at 250 nM were fit
to (see ``Experimental Procedures''), which
corrects for the reversible dimerization of this construct. Values of
were determined from sedimentation equilibrium studies (Footnote
2). This reveals 1/K = 0.5 µM and 1/K = 7.1 µM for
dimeric K413 ADP (stoichiometry 0.8) and 1/K = 0.6 µM and 1/K = 0.4 µM for dimeric K413 ADP +
beryllium fluoride (stoichiometry 0.8). Panel B, 100-200
nM K332 (closed squares), K332 + 1 mM BeSO + 5 mM NaF (closed
circles), K332 + 1 mM AlNO + 5
mM NaF (open triangles), K332 + 1 mM AMPPNP (closed diamonds), and K332 + 10 mM sodium phosphate (open squares). Conditions as in panel A. Data for each sample could be adequately fit to a
rectangular hyperbola, defining values of dissociation constants as
follows: K332 ADP, 20.8 µM (stoichiometry 0.9);
K332 ADP BeF, 5.6 µM (stoichiometry 0.8);
K332 ADP AlF, 1.4 µM (stoichiometry 0.8);
K332 AMPPNP, 1.1 µM (stoichiometry 0.8);
K332 ADP P , 18.2 µM (stoichiometry
0.8).
where n, the number of microtubule binding sites on
K413, is equal to 2. Thus, a prediction of the model described by is that the individual values of K are
highly correlated with each other. In the presence of cooperativity, K may be larger (positive cooperativity) or
smaller (negative cooperativity) than expected from that predicted by
the value of K . In the presence of cooperativity,
the free energy of binding of the second site to a microtubule would be
(Tanford, 1961)

where G is the
intrinsic free energy of binding in the absence of cooperativity, and
G ( ) is the interaction free energy. The
free energy of binding to the second site on K413 was derived by using
the value of the microscopic constant, K (derived from K ) to determine G and by
using the difference between the predicted value of K (determined from K by assuming no
interactions) and that determined from .
Effect of Inorganic Phosphate on
Kinesin ADP Microtubule AffinityThe effect of
inorganic phosphate on the affinity of K413 ADP for microtubules
was measured using the microtubule binding assay as described above. H-Labeled K413 in the presence of 1 mM ADP was
mixed with a range of microtubule concentrations, and the binding
affinity was measured as a function of increasing phosphate
concentration. The concentration of potassium acetate was varied to
keep the ionic strength constant. Data were fit to both and , and best fitting was found with , which assumes that only one of the two heads can attach
to the microtubule. Apparent dissociation constants (K ) were calculated from these
fits. The relationship between K and phosphate concentration was determined from a four-state
equilibrium model as follows.

which assumes that only one head of the K413 dimer can attach to
the microtubule when phosphate occupies the active site. In this
scheme, K is kinesin ADP, MK is
kinesin ADP bound to microtubules, P is inorganic
phosphate, and K are association constants
for each step. The apparent dissociation constant, K , at a given phosphate
concentration, [P ], is defined by

which yields the following.

Statistical MethodsInitial values for the
desired parameters from and 8 were
derived from a least squares curve fitting program (DeltaGraph Pro3),
yielding fits with r values >0.95. Fitting was
then refined by using a multivariate algorithm from a commercially
available statistics package (PROC NLIN; SAS 6.10) to generate
parameters ± 1 S.D.
RESULTS
Characterization of Human Kinesin
ConstructsPrevious studies of recombinant kinesin from a Drosophila clone had demonstrated that constructs containing
the amino-terminal motor domain could be dimeric or monomeric (Huang
and Hackney, 1994; Huang et al., 1994; Correia et
al., 1995; Lockhart et al., 1995; Young et al.,
1995), depending on how much of the -helical tail was included in
the construct. Since the human clone of kinesin used in these studies
is highly homologous to that from Drosophila, it seemed likely
that homologous constructs from this clone would behave similarly. Two
constructs were generated from the human clone: K413, containing the
first 413 residues from the amino terminus and corresponding to
residues 1-401 in the Drosophila sequence; and K332,
containing the first 332 residues from the amino terminus and
corresponding to residues 1-340 in the Drosophila sequence. Sedimentation velocity studies of K413 at concentrations
2 µM reveal an s value of 4.86. This is very similar to the corresponding value
for the Drosophila 1-401 construct, which behaves
largely as a dimer (Correia et al., 1995). Equilibrium
sedimentation studies establish that at 24.6 °C, the
dissociation constant for dimerization of K413 ADP is 0.738
± 0.043 µM. Studies with K413 ADP BeF,
K413 ADP AlF, and K413 ADP P yield very
similar values. Thus, over the concentration range used in
this study (50-500 nM), the fraction of K413 which is
dimeric varies from <5% to 50%. By contrast, sedimentation velocity
studies of K332 reveal an s value of
3.32, which, although slightly larger than the corresponding value of
the Drosophila homologue (Correia et al., 1995), is
within the range of constructs which in that study behaved as monomers
below 4 µM. The monomeric nature of K332 is also supported
by its elution behavior on Sephacryl S-300 and on Superose 12 FPLC
(data not shown), as well as by equilibrium sedimentation studies of
this construct to be reported elsewhere. Titration of
the active site of K413 was accomplished by measuring the equilibrium
constant for binding of the fluorescent nucleotide derivatives mant ADP
and mant AMPPNP, using an equilibrium dialysis technique. Scatchard
plot analysis of the data (Fig. 1) demonstrates that K413 binds
mant ADP with one class of binding site, characterized by a
dissociation constant of 0.67 µM and stoichiometry of 0.80
mol of mant ADP/mol of head. By contrast, the dissociation constant of
mant AMPPNP, at 7.1 µM, is approximately 10-fold greater,
and the stoichiometry is 1.3 mol/mol of head. The effect of EDTA
treatment on K413 was investigated by examining the stoichiometry of
mant ADP binding under conditions where it was present in large molar
excess over K413 active sites, in the absence of EDTA. This revealed a
range of stoichiometries of 0.87-0.95 over five separate
measurements (data not shown). Thus, EDTA treatment does appear to
reduce the binding stoichiometry by approximately 8-19%. This
percentage reduction in the binding stoichiometry after EDTA treatment
is very similar to that measured previously, using
[ H]ATP binding (Ma and Taylor, 1995b).
Figure 1:
Binding of mant AMPPNP (closed
circles) and mant ADP (closed boxes) to nucleotide-free
K413. K413 was made nucleotide-free as described (Sadhu and Taylor,
1992) and mixed with a range of concentration of mant nucleotide. Free
nucleotide was measured by an equilibrium dialysis method. Scatchard
analysis of the data reveals that binding of mant ADP to K413 is
characterized by a dissociation constant of 0.67 µM and a
stoichiometry of 0.80; for mant AMPPNP, the corresponding values are
7.1 µM and 1.30.
Steady-state Kinetics of the Kinesin ATPaseThe
steady-state ATPase kinetics of K413 and K332 were examined in the
presence of 0.5 mM ATP, which is a concentration that is
approximately 25-35-fold greater than the K for the corresponding Drosophila constructs. The
steady-state ATPase rates for K413 and K332 at this ATP concentration
were 0.003 and 0.007 s . The values of k for the corresponding Drosophila constructs are 0.01 and 0.029 s , respectively
(Gilbert and Johnson, 1993; Huang and Hackney, 1994).As in the case
of the Drosophila constructs, the K413 and K332 MgATPase
activities are markedly activated by microtubules. At 50 nM K413, the construct is essentially entirely monomeric, and data in Fig. 2A fit conventional Michaelis-Menten kinetics,
defining values of K and k of 3.5 µM and 35.1 s ,
respectively. Increasing the K413 concentration to 300 nM generated data that needed to be fit to . This defined
values of K and k for
dimeric K413 of 0.54 µM and 8.25 s . Fig. 2B demonstrates the corresponding data for K332,
which defines values of K and k of 26.0 µM and 43.6
s .
Figure 2:
ATPase rate versus tubulin dimer
concentration for kinesin constructs. Panel A, K413 at 300
nM (open squares), 50 nM (open
triangles), and 300 nM in the presence of 1 mM BeSO + 5 mM NaF (open circles).
Data for K413 at 50 nM fit Michaelis-Menten kinetics with k = 35.1 s and K = 3.5 µM. Data for K413
± beryllium fluoride at 300 nM were fit to (see ``Experimental Procedures''), which corrects
for reversible dimerization of this construct. Values of were
determined from sedimentation equilibrium studies (Footnote 2). This
reveals k = 8.25 s and K = 0.54 µM for dimeric
K413 and k = 0.83 s and K = 0.38 µM for
dimeric K413 + beryllium fluoride. Panel B, corresponding
data for K332 in the absence (closed diamonds) or presence of
1 mM AlNO + 5 mM NaF (open
squares), 1 mM BeSO + 5 mM NaF (open circles), and 0.5 mM sodium vanadate (open
triangles). Fitting to Michaelis-Menten kinetics reveals the
following: k = 43.6 s and K = 26.0 µM for
K332; k = 7.2 s and K = 4.0 µM for K332
+ beryllium fluoride; k = 0.08
s and K = 3.7
µM for K332 + aluminum fluoride; and k = 2.9 s and K = 5.8 µM for K332
+ sodium vanadate. Panel C, double-reciprocal plot of
data from panel B for K332 in the absence (open
squares) and presence (open circles) of 1 mM BeSO + 5 mM NaF. This reveals parallel
curves, as expected for uncompetitive inhibition, and defines a value
of K of 41
µM.
The kinetics of the microtubule-activated
ATPase activity showed a marked ionic strength dependence. Raising the
ionic strength from 50 mM potassium acetate to 150 mM KCl raised the value of K for K413 to 80
µM and decreased the value of k to
4 s (data not shown). Corresponding data for K332
were 97 µM and 10 s (data not shown).
Dissociation Constant of K413 and K332 ADP for
MicrotubulesPrevious kinetic studies on intact brain kinesin
and on truncated constructs (Hackney, 1988; Hackney et al.,
1989; Sadhu and Taylor, 1992; Gilbert and Johnson, 1994) indicated that
the rate-limiting step in the microtubule kinesin ATPase cycle was ADP
release, implying that kinesin ADP would be the predominant
species under steady-state conditions. To test this with the human
construct, the affinities of tritium-labeled K413 and K332 for
microtubules were measured in the presence of 1 mM MgADP,
using an Airfuge assay. Previous studies with a similar human kinesin
construct have shown that labeling with N-succinimidyl
[2,3- H]propionate has no effect on the
microtubule-activated ATPase or on the kinetics of mant ATP binding (Ma
and Taylor, 1995a). At a concentration of 50 nM, K413 is
>95% monomeric. Binding to microtubules in the presence
of ADP and at this concentration could be described by a hyperbolic
binding isotherm, defining a value of K of 7.8
µM and a maximum degree of binding of 0.80 ± 0.09 (Table 1). Increasing the concentration of K413 to 250 nM increases the fraction of dimer to 40% and enhances the relative
affinity. Fitting to reveals values of 1/K and 1/K of 0.5 and 7.1 µM,
respectively (Table 1). Data for K332 could be fit to a
hyperbolic binding isotherm and are depicted in Fig. 3B, which reveals a value of K of 20.8 µM and a maximum degree of binding of 0.78
± 0.05. For K332, values of K are very
similar to the corresponding values of K discussed above. As in the case of K ,
binding affinity showed a strong ionic strength dependence, increasing
to a value of 139 µM for K332 at 150 mM KCl (data
not shown).
Complex Formation with Beryllium Fluoride and Aluminum
FluorideBeryllium fluoride and aluminum fluoride are known to
form ternary complexes with myosin, actin, and other NTPases when
nucleotide is bound in the active site (Goodno, 1979; Combeau and
Carlier, 1988, 1989; Maruta et al., 1993; Phan and Reisler,
1992; Phan et al., 1993). These transition metals act as
uncompetitive inhibitors of the myosin ATPase by virtue of their tight
binding to the myosin ADP state. Recent crystallographic data
suggest that myosin ADP BeF mimics the
myosin ATP state, whereas
myosin ADP AlF andmyosin ADP Vn mimicaprehydrolyticmyosin-nucleotidetransitionstate (Fisheret al., 1994). To establish if these
metals had similar effects on the kinesin ATPase, K413 was incubated in
the presence of 30 µM MgADP with 1 mM BeSO + 5 mM NaF for 10 min, 1 h, 2 h, 4 h, and 6 h.
Taxol-stabilized microtubules were then added to 20 µM,
and MgATP was added to 0.5 mM to initiate the ATPase reaction.
In the absence of added beryllium fluoride, the ATPase rate at this
microtubule concentration is 11.1 s . Within 10 min
of incubation, this had decreased to 1.12 s , and by
1 h of incubation, had decreased further to 0.56 s .
More prolonged incubation did not reduce the ATPase any further, and
this result indicates therefore that complex formation is complete
within 1 h of incubation.Beryllium and aluminum fluoride, like
vanadate, reduce the affinity of myosin ADP for actin, since
myosin ADP beryllium fluoride and
myosin ADP aluminum fluoride mimic the weakly bound
prehydrolytic myosin states (Fisher et al., 1994). The value
of the actin-activated k is reduced in these
complexes because of the tight binding of the metals to the active site
(Maruta et al., 1993). Thus, if kinesin follows the same
behavior, it would be expected that beryllium fluoride and aluminum
fluoride should decrease the value of k and
increase the value of K for the
microtubule-activated kinesin ATPase. As Fig. 2B demonstrates, both transition metals reduce not only k but also K for K332,
implying that the kinesin ADP BeF and
kinesin ADP AlF states are more strongly bound than
kinesin ADP. Experiments performed in the presence of 0.5 mM sodium vanadate also demonstrate that this transition metal
reduces both k and K (Fig. 2B and Table 1). Corresponding data
for K413 in the presence of beryllium fluoride are shown in Fig. 2A. A double-reciprocal plot of the
microtubule-activated K332 ATPase rate versus microtubule
concentration is shown in Fig. 2C for samples in the
absence and presence of 1 mM BeSO + 5 mM NaF. This demonstrates essentially parallel curves, as expected
for uncompetitive inhibition, and defines a value of K for beryllium fluoride of 41 µM. Corresponding
values of K for aluminum fluoride and vanadate are
1.7 and 35 µM, respectively. Thus, at aluminum and
beryllium concentrations of 1 mM, essentially all of the
active sites of K413 ADP and K332 ADP have transition metal
bound. The decrease in the value of K implies that the transition metals increase the affinity of
kinesin ADP for microtubules. This was confirmed by using
tritium-labeled K413 and K332 in an Airfuge binding assay. Data are
summarized in Fig. 3A for K413 at 250 nM and Fig. 3B for K332 and in Table 1. Dissociation
constants for K332 ADP are 5.6 µM in the presence of
beryllium fluoride and 1.4 µM in the presence of aluminum
fluoride, and both values are close to the corresponding values of K (Table 1). Binding data for K332 in
the presence of 1 mM AMPPNP are nearly superimposable on those
for aluminum fluoride (Fig. 3B and Table 1).
Fitting of binding data for K413 ADP beryllium fluoride to reveals values of 1/K and
1/K of 0.6 and 0.4 µM, respectively (Table 1).
Effect of Inorganic Phosphate on the Microtubule Affinity
of Kinesin ADPInorganic phosphate binds to a number of
NTPases, including actin, tubulin, and myosin, with millimolar affinity
(Carlier and Pantaloni, 1988; Rickard and Sheterline, 1988; Schlistra et al., 1991; Carlier et al., 1988; Warshaw et
al., 1991; Yamakawa and Goldman, 1991; Iwamoto, 1995). In
vitro motility studies of actomyosin indicate that phosphate binds
to the myosin ADP intermediate state with an apparent dissociation
constant of 9.5 mM (Warshaw et al., 1991) and
inhibits motility by reducing the affinity of myosin for actin. If
beryllium fluoride and aluminum fluoride induce formation of a
kinesin ADP P transition state, then it would be
expected that millimolar phosphate should increase the affinity of
kinesin for microtubules. Conversely, if phosphate reduces the
affinity, this would suggest that these transition metals instead mimic
a strong binding state. To test this, tritium-labeled K413 at a
concentration of 400 nM was mixed with a range of microtubule
concentrations in the presence of 1 mM ADP and increasing
phosphate concentrations (1-15 mM). Data are summarized
in Fig. 4. Binding data could be fit adequately to a hyperbola,
even though nearly 50% of the K413 is dimeric under these conditions.
Fitting the values of K into reveals
that phosphate binds to K413 ADP with an apparent dissociation
constant of 0.8 mM. The reduction in apparent affinity could
be explained by assuming that only one head of the
K413 ADP P dimer can attach to the microtubule
and does so with a dissociation constant of 17.0 µM, a
value that is nearly identical to that for the monomeric K332 ADP (Table 1). This result suggests that millimolar concentrations of
inorganic phosphate should have little effect on the binding of
K332 ADP to microtubules. This is confirmed by the data in Fig. 3B and Table 1, which reveal that the
affinity of K332 ADP for microtubules is unaffected by the
presence of inorganic phosphate at a concentration as high as 10
mM.
Figure 4:
Effect
of phosphate concentration on K413 ADP microtubule affinity. Data
were fit to (see ``Experimental Procedures'') to
determine the dissociation constants of K413 ADP P for microtubules (1/K ) and of phosphate for
K413 ADP (1/K ), and this reveals
1/K = 17.0 µM and
1/K = 0.8
mM.
DISCUSSION
This study utilized two constructs derived from a human
homologue of the Drosophila kinesin heavy chain. K413,
containing residues 1-413, is homologous to Drosophila 1-401, a construct that sedimentation equilibrium studies
have revealed is largely dimeric (Correia et al., 1995).
Similar conclusions have been reached with Drosophila 1-392 (Huang et al., 1994). The sedimentation
velocity behavior of K413 is consistent with its capacity to dimerize,
although sedimentation equilibrium studies indicate a dimerization
dissociation constant that is approximately 10-fold larger. This larger dimerization constant may reflect intrinsic
differences between the human and Drosophila sequences or may
be due to the steric and/or ionic effects of the hexahistidine sequence
at the extreme carboxyl terminus of the human construct, which is used
in affinity purification. By contrast, K332 is homologous to the
monomeric Drosophila construct containing residues 1-340
(Huang and Hackney, 1994; Correia et al., 1995), and this is
consistent with its sedimentation velocity behavior as well as its
elution behavior on Sephacryl S-300 and Superose 12 FPLC. Both K332 and K413 possess an intrinsic MgATPase activity that is
very low. For both, microtubules enhance this ATPase activity several
thousandfold. A striking feature of the results from
microtubule-activated ATPase studies is that the value of k for monomeric K413 is nearly 5-fold larger
than that for dimeric K413 and is only 19% less than that for the
monomeric construct K332. This finding resolves an apparent discrepancy
between the values of k reported for Drosophila constructs that have been presumed to be dimeric.
The value of k for dimeric K413 is close to that
reported for experiments with Drosophila K401 at a kinesin
concentration of 500 nM (10.9 s ; Gilbert
and Johnson(1993)). Equilibrium sedimentation studies have shown that
at this concentration, approximately 90% of the construct is dimeric
(Correia et al., 1995). More recent studies from same
laboratory reported a value of k of 20
s (Gilbert et al., 1995). However, in this
study, the K401 concentration was lower, at 200 nM. At this
concentration, approximately 18-20% of the K401 would be
monomeric (Correia et al., 1995). predicts that
an overall rate of 20 s could be observed if k for dimeric K401 is 10.9 s ,
and k for monomeric K401 is approximately 55
s , which is consistent with our own results. Other
experiments on a Drosophila construct that is 9 residues
shorter measured a value of k of 47
s , which is very similar to that for K332 and only
1.3-fold larger than the value of k for
monomeric K413 (Hackney, 1994a). In this study, the concentration of
the kinesin construct used in the ATPase assay was 8.4 nM. It
is reasonable to assume that the association constant for dimerization
of this construct should be similar to or perhaps less than that for Drosophila K401, and given this, the published data would
indicate that this construct would be >75% monomeric (Correia et
al., 1995). Thus, our data clearly indicate that dimerization of
kinesin markedly inhibits the degree of microtubule activation. An
increase in enzymatic activity with increasing degrees of truncation
has been reported not only for kinesin, but also for other microtubule
motors, such as ncd (Stewart et al., 1993; Huang and Hackney,
1994; Huang et al., 1994; Chandra et al., 1993). One
possible explanation for this inhibition is that the conformational
changes that occur during the power stroke of the kinesin ATPase cycle
may be linked to a rate-limiting rotation of one head relative to the
other, which would be mediated through the dimerization segment
contained within the carboxyl-terminal 81 residues of K413 (Fig. 5). Loss of dimerization, either by dilution of K413 or by
truncation of the dimerization segment, would lower the energy barrier
for this conformational change and accelerate this rate-limiting step.
Figure 5:
Structural model of the
kinesin:microtubule mechanochemical cycle. Panel A, model of
the K332 microtubule interactions. The tubulin dimer is depicted
as the arrow-shaped structure, and its binding site for
kinesin is depicted as the vertically shaded box. The kinesin
monomer is depicted as the comma-shaped structure. In the
presence of ADP ± P (MKD/MKD P ), kinesin assumes a
weak binding conformation, symbolized by the rounded shape of
the microtubule-associated end of the molecule. When ATP occupies the
active site (MKT), kinesin assumes a strong binding
conformation, symbolized by the squared-off shape of the
microtubule-associated end of the molecule. Panel B, model of
the K413 microtubule interactions. In this figure, the two kinesin
heads are shaded differently to distinguish them. In addition,
the dimerization segment, containing portions of the -helical tail
segments of each monomer, is shaded separately. In the absence
of nucleotide, or when ATP occupies the active site (MKT, MK), binding to the microtubule demonstrates positive
cooperativity, presumably because of a stabilizing of the orientation
of the second kinesin head (cross-hatched) by attachment of
the first head (dotted) to the microtubule binding site (vertically shaded box). Hydrolysis of ATP to ADP+P (MKD P ) leads to a
weakening of the affinity of the cross-hatched head of the
kinesin dimer. This is postulated to lead to a change in flexibility of
the dimerization segment, which allows a rotation of the second (dotted) head and prevents this head from attaching to the
microtubule. Dissociation of phosphate (MKD) allows the
unattached (dotted) head to reattach weakly to the next
available downstream binding site. This is presumed to stabilize the
interaction of the other (cross-hatched) head, whose
microtubule affinity is thereby enhanced. Dissociation of ADP from the
active sites enhances the affinity of the attached heads to that seen
in the presence of ATP and regenerates a fully attached
state.
Active site titrations with mant ADP and mant AMPPNP give the
expected result of one class of binding site with an approximately 1:1
stoichiometry. The affinity of mant ADP for K413, determined in this
study by equilibrium methods, is approximately 2 orders of magnitude
lower than that measured with the complete heavy chain-light chain
complex (Hackney, 1988; Sadhu and Taylor, 1992). The large difference
in affinities between intact kinesin and the truncated constructs may
reflect the trapping of nucleotide in the active site of intact kinesin
when it assumes the folded conformation (see above; Hackney(1992)). In
contrast to myosin, which binds AMPPNP with higher affinity than ADP
(Trybus and Taylor, 1982), kinesin binds with the reverse order of
affinities: the dissociation constant of mant AMPPNP binding to K413 is
approximately 10 times larger than that for ADP (Fig. 1). This
argues that kinesin interacts with nucleotide in a manner distinct from
that for myosin. The results of microtubule binding studies with the
monomeric construct K332 will be discussed first, as their
interpretation is more straightforward. Binding studies in the presence
of 1 mM MgADP yielded dissociation constants that are close to
the corresponding values of K . The
relationship between the midpoint of the ATPase titration and the
dissociation constant was explicitly developed in a previous study of
the actosubfragment 1 ATPase mechanism (Rosenfeld and Taylor, 1984),
and the four-state model derived in that study can be applied to the
case of kinesin as well. This model, as applied to kinesin, assumes
that the kinesin ATP and kinesin ADP P states are in rapid equilibrium with microtubules, an assumption
that is supported by recent studies (Gilbert et al., 1995).
According to this model, the relation between steady-state velocity and
microtubule concentration is

where k and k are the weighted forward and reverse rate constants,
respectively, for the nucleotide hydrolysis step, and K is the association
constant of kinesin ADP P for the microtubule.
For both kinesin and the microtubule-kinesin complex, k k (Ma and
Taylor, 1995a, 1995b; Gilbert and Johnson, 1994), which leads to

where K =
1/K . Since the model
predicts that the intrinsic affinities of kinesin ADP and
kinesin ADP P are essentially equal, this leads
to the prediction that for K332 ADP, K K , which is supported by the data in Table 1. Experiments with K332 ADP + beryllium
fluoride and aluminum fluoride support the contention that kinesin
interacts with nucleotide in a manner distinct from that for myosin.
Both transition metals were found to enhance the affinity of K332 for
microtubules. In the case of aluminum fluoride, the enhancement in
affinity was the same as that seen with AMPPNP. This contrasts markedly
with the case of myosins, where these transition metals, as well as
inorganic phosphate, reduce the affinity of myosin for actin,
as expected with the assignment of the myosin ATP and
myosin ADP P states as weak binding (Goodno and
Taylor, 1982; Yamakawa and Goldman, 1991; Phan and Reisler, 1992).
Previous studies of kinesin with aluminum fluoride and ATP S in an in vitro motility assay suggested that kinesin has reversed
the cycle, that kinesin ADP is weak binding and kinesin ATP
and kinesin ADP P are strong binding (Romberg and
Vale, 1993). Interpretation of these results and of our own, however,
depends on an unambiguous assignment of the conformation for
kinesin ADP aluminum fluoride and
kinesin ADP beryllium fluoride. The results of our study
indicate that aluminum and beryllium fluoride mimic prehydrolytic
kinesin-nucleotide states, which is supported by crystallographic data
from myosin (Fisher et al., 1994) and that these states are
strongly binding, the opposite of what is seen in myosin. Binding
data for K332 can be interpreted by a relatively simple model, in which
monomeric kinesin can attach to the tubulin dimer in one of two
conformations: a strong binding state that releases approximately
-8.0 kcal/mol of binding free energy, and a weak binding state
that releases approximately -6.4 kcal/mol (Fig. 5A). The data in Table 1and Fig. 3B can then be explained by assuming that
K332 ADP assumes a weak conformation, whereas K332 AMPPNP and
K332 ADP aluminum fluoride assume the strong conformation. Interpretation of the binding studies with K413 is more complicated
because of the reversible dimerization that occurs with this
species and the need to account for one-site versus two-site binding of the dimer. The model defined by gave a superior fit to the data ( = 0.011 for K413 ADP and K413 ADP BeF) than
that for a simple hyperbolic isotherm ( =
0.10). However, initial attempts to fit the data to led to
large standard errors for 1/K and
1/K because of the high degree of correlation
between these parameters. This is consistent with the model described
by , since the values of K and K are related to each other (see
``Experimental Procedures''; Tanford(1961)). Improved fitting
required use of the Moore-Penrose inverse and led to values of K and K which had acceptable
errors. It is proposed that each head of the K413 dimer can assume a
strong or a weak conformation. Furthermore, it is presumed that
monomeric K413 ADP, like K332 ADP, attaches to the
microtubule via a weak interaction only. We propose that each head of
K413 ATP, mimicked by K413 ADP + beryllium fluoride or
aluminum fluoride, is in a strong conformation. If these two heads
behave in an identical and independent manner, then K = (K )/4 (Tanford, 1961). Fitting of
binding data, however, demonstrates that K = 1.5(K ). This implies that binding
of the second head of the K413 ATP dimer demonstrates positive cooperativity and releases an additional -1.1 kcal/mol of
interaction-free energy. Although the structural basis for this
cooperative interaction was not determined from this study, one
possibility is that the binding of the first head stabilizes the
orientation of the second head so that its binding is more favorable.
Hydrolysis of ATP to ADP+P is proposed to do two
things: it alters the conformation of both heads (to weak binding) as
well as their relative orientation, making it sterically impossible for
the second head to attach to the microtubule at all. Release of
phosphate, to generate a kinesin ADP dimer, would allow the second
head to reattach. Results of fitting to indicate that for
K413 ADP, K = (K )/14.2, which is nearly four times smaller than
predicted from a noninteracting system. These data can be interpreted
to mean that phosphate release has no effect on the intrinsic
microtubule affinity of kinesin ADP; rather, that weak attachment
of the second head (dotted in Fig. 5B)
stabilizes the interaction of the first head (cross-hatched in Fig. 5B) with the microtubule and enhances its
affinity. This model thus predicts that in the absence of a second
head, binding of kinesin ADP should be weak and that phosphate
should have no effect. The data with K332 and monomeric K413 support
this ( Table 1and Fig. 5A). Furthermore, it is
proposed that the strong reattachment of one of the K413 ADP heads
to the microtubule generates force and accelerates release of its bound
nucleotide. This is consistent with the finding that K K for
K413 ADP and explains why microtubules accelerate the release of
bound ADP from only one head of dimeric kinesin constructs (Hackney,
1994b). This model is also consistent with the relative affinities
of ADP versus AMPPNP for K413 (Fig. 1). Differences in
the energetics of microtubule binding between K413 ATP (mimicked
by K413 AMPPNP or K413 ADP beryllium fluoride) and
K413 ADP should be reflected in reciprocal differences in the
energetics of binding of AMPPNP versus ADP if the
conformational changes between K413 ADP and K413 ATP are
driven by nucleotide binding. Calculation from the nucleotide binding
data reveals a difference of 2.8 kcal/mol, which is close to the value
calculated from microtubule affinities, of 2.3 kcal/mol. Finally, the
effect of phosphate on K413 ADP is not due to a destabilizing of
microtubules, as some studies have shown that phosphate enhances microtubule stability, with an apparent dissociation constant of
25 mM (Carlier et al., 1988; Schlistra et
al., 1991), whereas others see no effect of inorganic phosphate
over this concentration range (Caplow et al., 1989). These
results therefore predict that dissociation of the microtubule-kinesin
complex during the ATPase cycle should occur upon formation of the
weakly bound kinesin ADP P complex, as suggested
by one of two models proposed on the basis of kinetic studies (Gilbert et al., 1995). This study provided a kinetic explanation for
processivity through the relatively slow rate of dissociation and the
rapid rate of rebinding of the weakly bound kinesin intermediate. Our
results demonstrate that the most weakly bound K413 intermediate
(K413 ADP P ) has a dissociation constant for
microtubules which is still significantly lower than the local
concentration of tubulin intracellularly (Gilbert et al.,
1995). Thus, our data indicate that at least one head of the kinesin
dimer would likely remain attached to the microtubule at all times in
the ATPase cycle. It also predicts that there is a large free energy
change associated with hydrolysis of ATP in the kinesin-microtubule
complex. This free energy change presumably drives the power stroke and
if so, should be reflected in a significant conformational change in
the kinesin molecule. As a subsequent study will demonstrate, this can
be detected through fluorescent anisotropy decay studies on labeled
kinesin preparations. The model presented here is also
consistent with several recent structural models of the
kinesin-microtubule and ncd-microtubule complex. Hydrolysis of ATP
would lead to dissociation of one head and pivoting of the attached
head toward the adjacent tubulin subunit. This would enable the
unattached head of the kinesin dimer, presumably containing ADP, to
attach to the next site along the microtubule protofilament. Since the
kinesin head is smaller than the tubulin heterodimer, attachment of the
second head could only occur in one direction because of simple steric
considerations. This model is similar to those proposed previously
(Hirose et al., 1995; Hackney, 1994b), except that it assigns
ATP hydrolysis and the production of kinesin ADP P as the step that leads to detachment and pivoting of the kinesin
molecule. Directionality in this model could be explained by assuming
that the more weakly attached of the two kinesin ATP heads is the
one that detaches after hydrolysis and that for kinesin, this is the
head which is closer to the(-) end. Thus, directionality becomes
an intrinsic consequence of the polarity of the microtubule lattice.
Reversal of directionality, as is seen in ncd, could then simply result
from reversing the affinities of the two heads in the ATP-bound state.
FOOTNOTES
- *
- This work was supported by Grants NS01500 and
NS31096 from the NINDS, National Institutes of Health (to S. S. R.), by
Grant AR31239 from the NIAMS, National Institutes of Health (to H. C.
C.), and by Grant HSF BIR9216150 (to J. J. C.). The costs of
publication of this article were defrayed in part by the payment of
page charges. This article must therefore by hereby marked
``advertisement'' in accordance with 18 U.S.C.
Section 1734 solely to indicate this fact.
- §
- To whom correspondence should be addressed:
Dept. of Neurology, University of Alabama at Birmingham, UAB Station,
510 Medical Education Bldg., Birmingham, AL 35294-0007.
- (
) - The abbreviations used are: ATP
S, adenosine
5`-O-(thiotriphosphate); AMPPNP, adenosine
5`-( , -imidotriphosphate); mant ADP, N-methylanthraniloyl ADP; DTT, dithiothreitol; K332,
bacterially expressed human kinesin construct containing residues
1-332; K413, bacterially expressed human kinesin construct
containing residues 1-413; PIPES, 1,4-piperazinediethanesulfonic
acid. - (
) - S. S. Rosenfeld, B. Rener, J. J. Correia,
M. S. Mayo, and H. C. Cheung, manuscript in preparation.
ACKNOWLEDGEMENTS
We thank Dr. Ron Vale (University of California, San
Francisco) for the generous gift of a clone of human kinesin, and
Sylvia and David MacPherson of the Protein Expression Core Facility of
the UAB AIDS Center (supported by Grant P30 AI27767 from the National
Institutes of Health) for help in the production of the K413 and K332
constructs. We also thank Dr. J. N. Whitaker (Department of Neurology,
UAB) for continued support.
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