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(Received for publication, October 4, 1995) From the
Procathepsin B from the parasitic trematode Schistosoma
mansoni was expressed as a glycosylation-minus mutant in yeast
cells and purified by means of a histidine affinity tag which was added
to the carboxyl terminus of the recombinant protein. The purified
zymogen underwent autoprocessing but required an assisting protease for
activation. Pepsin-activated schistosomal cathepsin B was further
characterized with the cathepsin B-specific substrates N-benzyloxycarbonyl (Z)-Arg-Arg-p-nitroanilide,
Z-Arg-Arg-7-amido-4-methylcoumarin, and
Z-Phe-Arg-7-amido-4-methylcoumarin. A proteolytic activity comparable
to mammalian cathepsin B was observed. In addition, we analyzed the
degradation of human hemoglobin by schistosomal cathepsin B, which has
been suggested to be the physiological target of the protease.
The trematode Schistosoma mansoni lives in human blood
vessels, causing the parasitic disease bilharziosis. Approximately 200
million people in tropical countries are infected by the helminth.
Infection with S. mansoni results in a life-long chronic
disease which is marked by increasing tissue damage caused by eggs
deposited throughout the body. With 750,000 deaths annually,
bilharziosis is the second most deadly parasitic disease after malaria. Proteases are key components of the pathogenicity of parasites. They
facilitate tissue penetration and determine nutritional sources of the
parasite within intermediate and human hosts(1) . Cathepsin B
is the major thiol protease of adult worms of Schistosoma mansoni and may be a valuable target for therapeutic agents. Cathepsin
B (EC 3.4.22.1) belongs to the family of cysteine proteases. On the
basis of sequence analysis, cysteine proteases have recently been
classified into ERFNIN and cathepsin B-like cysteine proteases (2) . Mammalian cathepsins B are lysosomal proteases involved
in intracellular protein degradation. In addition, they are believed to
play a role in tumor invasion and metastasis(3) . Only
little is known about cathepsin B of helminths. The genes of cathepsin
B from Haemonchus contortus (4, EMBL accession number M60212), Ostertagia ostertagi (5, EMBL accession number M88503), S.
mansoni (6, EMBL accession number M21309), and Schistosoma
japonicum (EMBL accession number X70968) and of the free-living
nematode Caenorhabditis elegans (7, EMBL accession number
M74797) have been determined, but the corresponding enzymes have not
been well characterized. Among these enzymes, cathepsin B of S.
mansoni has evoked most attention as it is believed to be a key
enzyme in the degradation of host hemoglobin(8) , and as it is
highly immunogenic in man. Early studies suggested that S.
mansoni possesses a protease which specifically hydrolyzes human
hemoglobin(9) , and two groups reported the purification of a
hemoglobinolytic protease(10, 11) . The latter group
described a cysteine protease with a molecular mass of 32 kDa and a
substrate specifity similiar to mammalian cathepsin B. In contrast to
the lysosomal localization of the mammalian cathepsin B, the
schistosomal counterpart is secreted into the gut lumen, which is in
line with its possible involvement in parasite nutrition(12) .
Nevertheless, detailed studies of the protease were impossible due to
the inavailability of sufficient amounts of purified protein from the
obligate parasitic worm. The gene of schistosomal cathepsin B was
isolated from a cDNA gene bank of adult worms(6) , taking
advantage of the fact that this protease is highly immunogenic in man.
The protease (also termed Sm31) has been suggested as an
immunodiagnostic antigen of bilharziosis(13) , which is at
present diagnosed by laborious examination of feces and urine for eggs. In view of its participation in host hemoglobin degradation and its
potential as a possible component of an immunoassay, several attempts
to express active schistosomal cathepsin B have been undertaken in the
past. Cathepsin B of S. mansoni has been expressed as a
fusion protein with the amino-terminal region of the RNA replicase of
the phage MS2 in Escherichia coli. However, the fusion protein
aggregated in the cytoplasm and could only be solubilized with strong
denaturants(14) . We expressed procathepsin B in its unfused
form in E. coli, but the recombinant protein was also found to
be insoluble. ( Recently, we
succeeded in expressing cathepsin B in Saccharomyces
cerevisiae. Here we report on the construction of a plasmid which
allowed efficient expression of procathepsin B. The coding region of
the zymogen was fused to the mating factor
After destruction of the unique EcoRI site of the vector pMATA21/51/H-2, the plasmid was cut
with NarI, treated with Klenow's fragment, digested with HindIII, and subsequently ligated to a 1.4-kilobase fragment
obtained by partial digestion of pSP-Cb1 (17) with PvuII and HindIII. The 1.4-kilobase fragment contains
the complete coding sequence of preprocathepsin B (EMBL accession
number M21309). The resulting plasmid, referred to as intermediate, was
cut with EcoRI and StuI and ligated to an EcoRI-restricted PCR fragment derived from pSP-Cb1 with a
sense primer representing the amino terminus of procathepsin B plus the
dipeptide Glu-Ala from the signal sequence (pCb5:
GAAGCTCATATTTCAGTTAAG) and a reverse primer (pCb4: CCAACATGATCCACATCG)
280 bases further downstream. Clones containing the PCR fragment were
detected by colony hybridization, and the correct in-frame fusion of
preproMF
Figure 1:
Yeast
expression plasmid pEMBLyex2-Sm31. A, construction of the
expression cassettes; B, physical map. The plasmid was
constructed as described under ``Experimental Procedures.''
The ampicillin resistance gene (Amp) and the bacterial plasmid origin
colE1 (ORI) allow selection and maintenance of the shuttle vector in E. coli hosts. Yeast selection markers are leu2-d (
The expression
cassettes of pUC8-Sm31A and pUC8-Sm31B were integrated into various S. cerevisiae shuttle vectors with different orgins of
replication and resulted in expression vectors under the control of the
constitutive MF The construct we used for subsequent
high level expression of recombinant procathepsin B was based on the
yeast expression vector pEMBLyex2 (18) which provides an
inducible GAL10/CYC1 hybrid promoter (19) , a polylinker and
signals for transcriptional termination and polyadenylation, as well as
the two selection markers URA3 and leu2-d. To construct pEMBLyex2-Sm31 (Fig. 1B), an AccI (filled-in)/BglII
fragment encoding the preproMF
The cleared culture supernatant was
brought to 0.3 M NaCl with 5 M NaCl, diluted with 1
volume of buffer A (50 mM sodium dihydrogen phosphate, 300
mM NaCl) and adjusted to pH 8. Then, 0.02-0.002 volume
of Ni
In a second attempt, a
glycosylation site of procathepsin B was destroyed. The primary
structure of procathepsin B contains two consensus sequences for N-linked glycosylation,
Asn-X-Ser/Thr/(Cys)(26) . However, one of the
consensus sequences is followed by a proline residue which often
prevents N-glycosylation(27) . The native protein is
most probably not modified at this site, as only one N-linked
sugar chain has been determined experimentally(28) . The
mutated recombinant protein was no longer glycosylated, but the
expression rate of procathepsin B under the control of the constitutive
MF Reducing the copy number of
constitutive expression units can lead to an increase of secretion
efficiency in yeast(29) . Our attempts to improve expression
using an integrating expression vector or an autonomously replicating
expression plasmid, however, resulted in a decrease of expression. High
level expression (up to 10 mg/liter) was finally achieved by expressing
the preproMF Expression was found to be
optimal when the yeast strain HT393, which is deficient in several
proteinases, was grown in complete medium, thus favoring high biomass
accumulation. In Fig. 2A, the culture supernatant of
HT393 (pEMBLyex2-Sm31) is compared with the supernatant of a control
culture. A dominant 40-kDa protein is present in the culture medium of
the expressing yeast strain, but not of the control culture. This
protein corresponds to procathepsin B as demonstrated by the Western
blot (Fig. 2A). In addition to the 40-kDa band, a
protein of about 20 kDa is seen in the Western blot. This protein
probably presents a degradation product of procathepsin B which seems
to have lost the carboxyl-terminal hexahistidine affinity tag as it
does not copurify with the intact zymogen (see below).
Figure 2:
Expression and purification of
schistosomal procathepsin B. A, Coomassie Blue-stained gel (lanes 1 and 2) and Western blot (lanes 3 and 4) of yeast culture supernatants. Proteins contained
in 0.1 ml of supernatant each were trichloroacetic acid-precipitated
and analyzed by SDS-PAGE. Western blot analysis was performed with
anti-cathepsin B serum. Lanes 1 and 3, HT393; lanes 2 and 4, HT393 transformed with pEMBLyex2-Sm31. B, elution profile of Ni
To accomplish
secretion of procathepsin B, the gene was cloned behind the
preproMF
The eluant of the metal chelate chromatography depended on the
elution method applied (Fig. 2C). When using EDTA to
desorb the protein from the matrix, a single protein of about 40 kDa
(theoretical molecular mass of procathepsin B, 38 kDa) was observed.
When the protein was eluted by low pH, two immunoreactive proteins (40
kDa and 35 kDa) appeared in the eluant. It was first considered that
the 35-kDa protein is a degradation product of cathepsin B caused by a
contaminating protease which is active either at low pH or in the
absence of EDTA. However, when purified procathepsin B obtained by EDTA
elution (pH 6.3) was incubated at pH 5, the 35-kDa protein was observed
even in the presence of protease inhibitors (Fig. 3). The 35-kDa
protein was absent when the thiol protease inhibitor E-64 was included
in the incubation mixture.
Figure 3:
Autoprocessing of procathepsin B. 20 pmol
of procathepsin B (final concentration 1 µM) were
incubated in 50 mM sodium phosphate, 300 mM NaCl, 10
mM DTT, pH 5.0, at 37 °C for 16 h in the presence and
absence of protease inhibitors as indicated. M, molecular
weight standards, E-64, addition of 1 µM E-64; PMSF, 2 mM phenylmethylsulfonyl fluoride; PepA, 1 µM pepstatin A;
Since no vacuolar cysteine protease has
been detected in S. cerevisiae(32) and since the
yeast strain used for expression is deficient in a subunit of yscE, the
only known cellular cysteine protease of S.
cerevisiae(33) , the 35-kDa protein is probably an
autoprocessing product of procathepsin B. It is noteworthy that
autocatalytic processing has also been described for mammalian
cathepsin B (34, 35) and for papain(36) .
Figure 4:
Amino-terminal sequences and processing
sites. Amino-terminal sequences of recombinant procathepsin B (proCb), its autocatalytic product (intCb), and the
pepsin-activated cathepsin B (pepCb), as determined by Edman
degradation of the purified proteins, are compared with those of rat
cathepsin B (R. nor.). The amino-terminal sequences of the
mature enzymes are in bold letters. The amino termini of the
recombinant schistosomal zymogen are indicated (>). Arrows indicate processing sites of KEX2 and STE13, of autoproteolysis (S. m. and R. nor.), and of pepsin activation.
Processing sites of the rat enzyme were determined by Rowan et
al.(34) . The sequences were aligned using GAP (GCG
programm package). Identical amino acids residues are marked with asterisks, similar residues with dots.
In
comparision with the native protein, the recombinant zymogen has a
ragged amino terminus, is not glycosylated, due to the engineered
mutation Asn-183
In order to convert the inactive
procathepsin B into an enzymatically active form, several proteases
were tested. The aspartic protease pepsin was found to activate
procathepsin B in a time- and dose-dependent manner (Fig. 5A). SDS-PAGE analysis of the activated protease
revealed that a 34-kDa product only slightly shorter than autoprocessed
intCb was the enzymatically active species (Fig. 5B).
The amino terminus of this product, subsequently termed pepCb, was
determined (Fig. 4) and revealed a pepsin digestion site only
nine residues carboxyl-terminal to the autocatalytic cleavage site. The
cleavage by pepsin occurs carboxyl-terminal to leucine, which is in
line with the substrate specificity of pepsin. Interestingly, the
removal of only nine amino acids, as compared to inactive intCb, is
sufficient for activation.
Figure 5:
Activation of schistosomal procathepsin B
by pepsin. A, dose-dependent activation kinetics. 50 pmol of
procathepsin B (final concentration 1 µM) were incubated
with 120, 50, and 12 pmol of porcine pepsin. Aliquots of 10 pmol of
cathepsin B were withdrawn at various time intervals for enzymatic
analysis with the substrate Z-Arg-Arg-pNA, which is not
hydrolyzed by pepsin. B, Coomassie Blue-stained SDS-PAGE gel
of pepsinactivated cathepsin B. Lane 1, 10 pmol of
intermediate cathepsin B (intCb); lane 2, 10 pmol of
pepsin-activated cathepsin B (pepCb); lane M,
molecular mass standard.
The pH dependence of pepsin-activated
schistosomal cathepsin B was studied. It shows a roughly bell-shaped
activity profile under nonsaturating substrate concentrations with a pH
optimum around pH 6.0 (Fig. 6). As expected, schistosomal
cathepsin B is susceptible to all thiol protease inhibitors tested (Table 1).
Figure 6:
pH-activity profile of schistosomal
cathepsin B. 15 pmol of pepsin-activated cathepsin B were added to the
assay buffer (10 mM DTT, 1 µM pepstatin A, 0.4
mM EDTA) buffered with 100 mM
Na
A detailed comparison with native schistosomal
cathepsin B is impossible since the native enzyme is only poorly
characterized and doubts about the purity of the preparations
persist(55) . Lindquist et al.(10) reported a
very low K
Figure 7:
Hemoglobin digestion by cathepsin B.
Approximately 1 nmol of substrate (globin or freshly oxygenated
hemoglobin) was digested with approximately 50 pmol of pepsin-activated
schistosomal cathepsin B or 5 pmol of bovine cathepsin B in 15 mM MES, 150 mM NaCl, 2 mM DTT, 1 mM EDTA,
2 µM pepstatin A, pH 5.9. The digestion reaction was
allowed to proceed for 16 h before the reaction was analyzed by HPLC. a, human globin digested with 10 pmol of schistosomal
cathespsin B. b, human hemoglobin digested with schistosomal
cathepsin B. Major peaks (see arrows) underwent molecular mass
determination and amino-terminal amino acid sequencing. c,
human hemoglobin digested with bovine cathepsin B. d, as b but in the presence of 5 µM thiol-protease inhibitor
E-64.
Active site titration with the inhibitor E-64 revealed that
pepsin-activated recombinant cathepsin B was 60% active (data not
shown). The inactive fraction can be explained by denaturation during
fermentation and purification or by incomplete pepsin activation. Schistosomal cathepsin B was originally described as a
hemoglobinolytic protease isolated from the gut of S. mansoni.
Although hemoglobin degradation was considered to be the physiological
role of this protease, there are no reports to our knowledge concerning
the degradation products of hemoglobin proteolysis. We analyzed the
peptide fragments of hemoglobin digestion by schistosomal cathepsin B.
Peptide fragments were separated by HPLC. Peptides occurred only when
cathepsin B was included in the digestion reaction and when the
inhibitor E-64 was omitted from the reaction ( Fig. 7and Fig. 8). Unexpectedly, the overall pattern of peptides was very
similiar regardless of enzyme source (bovine or schistosomal cathepsin
B) or of substrate (freshly oxygenated hemoglobin, methemoglobin (not
shown), or globin). Although globin digestion proceeded the fastest, we
used freshly oxygenated hemoglobin for the digestion reaction in order
to best mimic the in vivo situation. Major peptide fragments
were subjected to molecular mass determination by matrix-assisted laser
desorption/ionization time of flight mass spectrometry and
amino-terminal amino acid sequencing. Considering an experimental error
of 1 g/mol, it was impossible to unambiguously assign a peptide
fragment from molecular mass determination alone. But, together with
the amino-terminal amino acids, peptide fragments could be assigned (Table 3).
Figure 8:
Globin
degradation by schistosomal cathepsin B. 2 nmol of human globin
The time course of globin digestion is best
demonstrated by the SDS-PAGE analysis of peptides (Fig. 8).
Peptide length decreases over the time of incubation. There do not seem
to exist any particuliar stable peptide intermediates. The aim of this study was the functional expression of
schistosomal cathepsin B. This protease might play a key role in the
nutrition of the parasitic worm and is highly immunogenic in man. Functional expression of this important enzyme was unsuccessful in E. coli, but secretion by the host organism S. cerevisiae led to active enzyme. This is in line with former observations
that secretion can be essential for correct folding and disulfide
bridge formation of proteins which naturally pass through the secretion
pathway(38, 39) . The expression/secretion of
procathepsin B was optimized by using an inducible promoter and by
increasing the number of expression units. Purification using
metal-chelate chromotography turned out to be extremely simple. There
was no need to lyse cells, and the application of the highly specific
adsorbent circumvented a volume reduction step usually required to
purify secretory proteins. Although the fusion protein
proMF When comparing the
primary structure of mammalian cathepsin B with schistosomal cathepsin
B, it is evident that the amino acids of the mature enzymes are well
conserved (50-60% identity) whereas those of the propeptide are
more divergent (20-30% identity). Clearly, the mature enzyme has
more structural restrains than the activation peptide. We also found
that the enzymatic properties of rat cathepsin B and schistosomal
cathepsin B are comparable. On the other hand, we observed that the
processing mode of the respective zymogens differs. According to
Koelsch et al.(41) , there are three processing modes
for zymogens: complete self-processing, partially assisted processing,
and fully assisted processing. Rat cathepsin B is capable of complete
self-processing (34) . Although we cannot completely rule out
the possibility that a contaminating thiol protease is responsible for
the appearance of intermediate schistosomal cathepsin B, our
experimental evidence indicates that processing of schistosomal
procathepsin B is partially assisted in vitro. In fact,
despite numerous attempts under varying conditions, we did not succeed
in obtaining active cathepsin B without an assisting protease. In
the case of aspartic proteases, the processing mode can be predicted to
a limited extent from the primary structure(41) . Comparing the
amino acid sequences of the propeptides, there is no obvious
relationship between the processing site of mammalian cathepsin B
(Gly/Met/Ala) As the intermediate
schistosomal cathepsin B is not active, it probably does not contribute
to the conversion of procathepsin B. Rather, procathepsin B may undergo
intramolecular processing, or minor amounts of mature cathepsin B
(although not detected in enzyme assays) may catalyze the conversion.
Future constructions of hybrid proteins and the introduction of
specific amino acid changes in the propeptide of cathepsin B will shed
light on the mechanism of zymogen activation and on the underlying
structural requirements. Upon incubation of procathepsin B or
intermediate cathepsin B with pepsin, active enzyme was obtained. Since
intermediate and pepsin-activated cathepsin B differ only by nine
residues, it is tempting to speculate that the two adjacent arginines
located within the removed peptide (Fig. 4) interact with the
substrate binding site and block the enzyme as long as the peptide is
covalently linked to the enzyme. Our results prove that schistosomol
cathepsin B cleaves human hemoglobin at several positions. We were able
to determine some of the positions. A dicarboxypeptidase activity has
been reported for cathepsin B(46) . Although our data did not
give any hints that an exopeptidase activity was present, we only used
the amino-terminal ends of fragments for the calculation of the
consensus sequence of cleavage sites (Table 3). The consensus
sequence 6X1 The early studies from Senft and
co-workers (50, 51) suggested the existence of a
protease which prefers hemoglobin toward globin. This result was taken
as evidence that this protease is able to degrade human hemoglobin very
specifically and effectively and was subsequently termed hemoglobinase.
Cathepsin B is not inhibited by phenylalanine (not shown), a property
attributed to the hemoglobinolytic activity analyzed by Senft and
co-workers(50, 51) , and does not show a preference
toward hemoglobin. Therefore, cathepsin B does not merit the term
hemoglobinase and most likely is not identical with these early reports
of hemoglobinolytic activity. Cathepsin L and cathepsin D have also
been proposed to play a crucial role in hemoglobin digestion (47, 48) but so far hemoglobin degradation by these
proteases has not been studied in detail. Hemoglobin digestion by
the intraerythrocytic parasite Plasmodium falciparum has been
analyzed more thoroughly(42, 49) . After the initial
and specific attack of a hemoglobinolytic aspartic protease, hemoglobin
molecules are further broken down by another aspartic protease and a
cysteine protease. The three proteases are reported to act in a
synergistic manner. Interestingly, the cysteine protease involved also
prefers globin before hemoglobin. However, at this time, it is too
early to speculate if hemoglobin digestion in S. mansoni proceeds analogously to the digestion in P. falciparum. So far it is unclear how schistosomal cathepsin B is activated in vivo, whether cathepsin B preferentially degrades other
human serum proteins, and how blood proteinase inhibitors act on
cathepsin B. The procedure described here, however, makes it possible
to obtain larger amounts of the zymogen, which will enable further
studies to define the physiological role of this protease and its
possible use in the diagnosis of bilharziosis.
Volume 271,
Number 3,
Issue of January 19, 1996 pp. 1717-1725
©1996 by The American Society for Biochemistry and Molecular Biology, Inc.
PURIFICATION AND ACTIVATION OF THE RECOMBINANT PROENZYME
SECRETED BY SACCHAROMYCES CEREVISIAE(*)
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
REFERENCES
)In addition, cathepsin B has been expressed
in insect cells, but the yield of soluble enzyme was too low for
purification and enzyme characterization (15) .
secretion signal, and
the recombinant protein was secreted in the culture supernatant by the
yeast cells. It was purified by taking advantage of a hexahistidine
affinity tag which was added to the carboxyl terminus of the protein.
The zymogen was subsequently processed to active cathepsin B in
vitro by pepsin and characterized enzymatically.
Materials
Restriction endonucleases and DNA-modifying enzymes were
purchased from New England Biolabs. Radiochemicals were obtained from
Amersham. Protease inhibitors were bought from Sigma. The substrates N-benzyloxycarbonyl-L-arginyl-L-arginine-p-nitroanilide
(ZArg-Arg-pNA), (
)N-benzyloxycarbonyl-L-arginyl-L-arginine-7-amido-4-methylcoumarin
(Z-Arg-Arg-AMC), and N-benzyloxycarbonyl-L-phenylalanyl-L-arginine-7-amido-4-methylcoumarin
(Z-Phe-Arg-AMC) were purchased from Bachem and Ni-NTA
agarose was from Qiagen. All reagents were at least analytical grade.
Plasmid Constructions
DNA manipulations were carried out essentially as described
by Sambrook et al.(16) using the E. coli strains HB101 and C600 as hosts. Site-directed mutagenesis was
carried out by PCR using an automated thermocycler (ATAQ, Pharmacia).
The cDNA of procathepsin B of S. mansoni was cloned into three
expression cassettes.pUC8-Sm31A
The plasmid pMATA21/51/H-2 (a gift from E. F.
Ernst, Düsseldorf) is a pUC8-based vector carrying
the EcoRI-HindIII fragment of mating-factor
from S. cerevisiae (EMBL accession numbers J01340 and X15154)
comprising the promoter and the prepropeptide of MF
. The MF
preprosequence was changed by site-directed mutagenesis and contained a
new StuI restriction site immediately behind the recognition
site (Lys-Arg) of the prohormone processing enzyme KEX2. This mutation
allows easy in-frame blunt end ligation of heterologous DNA downstream
from the preprosequence of MF
.
with the amino-terminal part of procathepsin B, as well
as the integrity of PCR-generated stretches, were confirmed by DNA
sequencing. This plasmid was cut with EcoRI and NdeI
and ligated to a 1.2-kilobase DNA fragment coding for the
carboxyl-terminal part of Sm31, obtained by partial digestion of the
intermediate with EcoRI and NdeI. The resulting
construction pUC8-Sm31A contained a complete expression cassette: a
MF
promoter followed by the gene fusion coding for
preproMF
-procathepsin B (Fig. 1A).
-isopropylmalate dehydrogenase gene with a defective
promoter) and URA3 (orotidine-5`-phosphate decarboxylase
gene). Replication in yeast cells is ensured in cir hosts through ORI 2µ and STB sequences. Expression of the
fusion protein preproMF
-procathepsin B (MF
-Sm31) is
controlled by the galactose-inducible GAL/CYC hybrid promoter.
Polyadenylation and transcriptional termination signals are located
between the HindIII and the STB
sequence.
pUC8-Sm31B
Using the mutagenesis primers Gly(P):
ATTGTTACTGCAAGTTCGAAAGAACAGCACACCGGTGTG (BstBI site, glutamine
codon, and BsrfI site underlined) and His(P):
CTTTTATTTAAGTATTAGTATACTTAGTGATGGTGATGGTGATGGTTTATTCGACGC (AccI site and His-6-tail underlined) two point mutations were
introduced and a hexahistidine affinity tag was appended to the
carboxyl terminus of procathepsin B. The substitution of Asn-183 by Gln
destroyed a consensus sequence for N-linked glycosylation,
while the second point mutation introduced a diagnostic restriction
site BsrFI. The fragment obtained by amplifying procathepsin B
with the two mutagenesis primers was cut with BstBI and AccI and ligated to pUC8-Sm31A, which had been digested with
the same enzymes. This construct, which allowed the expression of a
nonglycosylated and affinity-tagged procathepsin B, was confirmed by
DNA sequencing and named pUC8-Sm31B.pUC8-Sm31C
A PCR fragment obtained by amplifying
pUC8-Sm31B with the sense primer pMF: AAGAAGATCTAAAAGAATGAGATTTCC (BglII and start codon underlined) corresponding to the amino
terminus of preproMF
, and the reverse primer pCb4:
CCAACATGATCCACATCG was cut with BglII and AatII and
ligated to pUC8-Sm31B, digested partially with the same restriction
endonucleases. The resulting construction was a promoter-free
expression cassette of mutated preproMF
-procathepsin B, which was
confirmed by DNA sequencing and named pUC8-Sm31C.
promoter.
-procathepsin B fusion was isolated
from pUC8-Sm31C and cloned into the SalI (filled-in) and BamHI restrictions sites of the pEMBLyex2 polylinker.Expression and Purification of Procathepsin B
Cyropreserved competent yeast cells of strain HT393 (leu2, ura3, pra1, prb1, prc1, cps1, pre1) were prepared according to
Dohmen et al.(20) and transformed with
pEMBLyex2-Sm31. Ura transformants were detected on
agar minimal plates (2% glucose, 0.67% yeast nitrogen base without
amino acids (Difco), 20 mg/liter L-tryptophan, adenine, L-histidine, L-methionine, and L-lysine, 30
mg/liter L-leucine) grown at 30 °C for 3 days and
subsequently cultured on agar minimal plates. For large scale
expression of procathepsin B, 20-200 ml of minimal medium without
uracil and leucine were inoculated with transformed yeast cells and
grown for 24 h on an orbital shaker. Expression was induced by
inoculating the preculture into 10 volumes of complete medium (2%
galactose, 1% yeast extracts (Difco), 2% tryptone (Difco), 100 mM sodium phosphate, pH 6.0). These shake-flask cultures were grown
for 72 h at 30 °C, 100 rpm.
-NTA agarose previously equilibrated with buffer
A was added, and the suspension was stirred overnight at 4 °C. The
agarose beads were collected by vacuum filtration and washed twice with
0.05 volume of buffer A and twice with buffer B (same as buffer A, but
adjusted to pH 7). The matrix was poured in a C10 column or a C26
column (Pharmacia Biotech Inc.), and proteins were eluted with a pH
step gradient (buffer A adjusted to pH 6, pH 5, pH 4, and pH 3, flow
rate: 1 column volume/h). Procathepsin B eluted at pH 4. Alternatively,
procathepsin B was eluted with 100 mM EDTA, 50 mM sodium phosphate, pH 6.3.
SDS-PAGE and Western Blotting
Proteins were separated by SDS-PAGE according to Laemmli (21) or according to Schägger & von
Jagow(22) . The gels were stained with Coomassie Blue or
electroblotted (Fast-Blot, Biometra, Göttingen,
Germany) onto nitrocellulose membranes (Schleicher &
Schüll). After transfer, the membranes were blocked
for 30 min with 1% Tween 20 in Tris-buffered saline (TBS), incubated
for 1 h with polyclonal anti-cathepsin B rabbit serum diluted 1:2000
into TBST (TBS + 0.05% Tween 20), washed with TBST, and incubated
for 1 h with anti-rabbit goat antibodies coupled to alkaline
phosphatase (Jackson Immunoresearch, 1:5000 in TBST). The membrane was
washed again in TBST and stained with 5-bromo-4-chloro-3-indolyl
phosphate/nitro blue tetrazolium.Amino-terminal Sequencing of Proteins
After separation by SDS-PAGE, proteins were blotted onto
polyvinylidene difluoride membranes (23) and stained with
Coomassie Blue. Bands of interest were cut out and used directly for
determination of amino-terminal amino acid residues with an Applied
Biosystems model 477A protein Sequencer. Peptides (digestion fragments
of human hemoglobin) were sequenced after HPLC purification.Determination of Procathepsin B
Due to the lack of enzymatic activity of procathepsin B, the
recombinant protein was detected by Western blotting, and the
concentration was estimated from Coomassie Blue-stained gels of yeast
culture medium concentrated by trichloroacetic acid precipitation. The
concentration of purified zymogen was determined according to Bradford (24) using bovine serum albumin as standard.Activation of Procathepsin B
1 volume of procathepsin B solution (0.05-0.2 mg/ml)
was combined with 0.5 volume of pepsin solution (5-20 µg/ml
in 0.5 M sodium phosphate, pH 3.0) and incubated at 37 °C
for 10 to 60 min. The activation reaction was stopped by addition of 9
volumes of assay buffer (pH 6.0) or by adding pepstatin A to a final
concentration of 1 µM.Enzyme Assay
Z-Arg-Arg-pNA
The method of Hasnain et
al.(25) was used. Hydrolysis of Z-Arg-Arg-pNA
( = 10,400 M
cm
) was monitored with a Hitachi U-3000 photometer
or with a Bio-Rad UV-3550 microtiterplate photometer equipped with a
405 nm filter and controlled by the Kinetic Collector Software
(Bio-Rad).
AMC Derivates
The hydrolysis of Z-Arg-Arg-AMC and
Z-Phe-Arg-AMC was determined according to the methods of Barrett and
Kirschke (44) and Barrett et al. (52) which
were modified slightly. The stock buffer was 60 mM MES, pH
5.9, 600 mM NaCl, 4 mM EDTA. Each assay tube
contained 0.375 ml of stock buffer, 0.1 ml of 30 mM DTT, and
0.95 ml of 0.1% Brij 35. 37.5 µl of enzyme solution (approximately
2 pmol) were added, preincubated 2 min at 37 °C, and equilibrated
to room temperature. The reactions were started by the addition of 37.5
µl of 4 mM substrate solution in dimethyl sulfoxide and
stopped, after an exactly 15-min incubation at 25 °C, with 1.5 ml
of 100 mM sodium monochloroacetate in 100 mM sodium
acetate, pH 4.3. Fluorescence was determined by a fluorescence
spectrometer (Model 3000, Perkin-Elmer Ltd., Beaconsfield,
Buckinghamshire, United Kingdom) with the excitation wavelength at 370
nm and emission measured at 460 nm.Reduction of Methemoglobin
Reduction and oxygenation of commercial methemoglobin (Sigma)
to oxyhemoglobin was performed in the cold as follows. Adapted from the
procedure of Dixon and McIntosh(53) , a column of 70 5
mm (Pasteur capillary pipette), filled with Sephadex G-25, was
equilibrated with an oxygen-saturated buffer, containing 10 mM MES, pH 6.5, and 1 mM EDTA. 75 µl of a freshly
prepared 10% (w/v) solution of sodium hydrosulfite in this buffer was
run on the column and drained into the gel with 50 µl of the
equilibration buffer. 100 µl of a saturated aqueous solution of
methemoglobin was applied to the column and run in the same buffer. The
peak fraction was re-equilibrated on a second column. Complete
reduction and oxygenation of hemoglobin was checked
spectrophotometrically(54) .
Isolation of Peptides
Peptides were separated by reversed-phase HPLC through a
Vydac (Hesperia, CA) C
, 30-nm narrow bore (2.1 250
mm) column using 0.1% (v/v) aqueous trifluoroacetic acid with an
acetonitrile gradient (0-60% in 45 min) and a flow rate of 200
µl/min at 45 °C. About 1 nmol of cathepsin B-digested
hemoglobin was applied on the column and monitored at 220 nm. For
preparative runs, about 10 nmol of digested hemoglobin
/
-chains were applied, and individual peak fractions were
collected manually.Mass Spectrometry
Peptide masses were determined by matrix-assisted laser
desorption/ionization time of flight mass spectrometry on a Vision 2000
(Finnigan MAT, Bremen, FRG) equipped with a nitrogen laser. For each
analysis, 1 µl of a reversed-phase HPLC fraction (2-5 pmol of
peptide) was mixed with 1 µl of 2,5-dihydroxybenzoic acid as matrix
directly on a sample target. Spectra were composed of 10-20 laser
shots and calibrated externally with angiotensin and insulin.
Expression of Procathepsin B
Our attempts to
express active cathepsin B in E. coli failed due to
aggregation of the recombinant protein in the cytoplasm. Therefore, we
decided to express procathepsin B as a secretory protein in yeast. We
constructed several yeast expression plasmids, but most of them
resulted in disappointingly low yields of recombinant protein.
Expression of procathepsin B using the constitutive MF
promoter on
a yeast episomal plasmid resulted in approximately 20 µg of
recombinant protein per liter of culture. In addition, analysis was
hampered due to heterogeneous hyperglycosylation of the recombinant
protein. Digestion with endoglycosidase F/N-glycosidase F
(Boehringer Mannheim) was necessary to identify an immunoreactive band
on Western blots (data not shown).
promoter remained low.
-procathepsin B fusion protein under the control of
the inducible galactose promoter of the yeast episomal plasmid
pEMBLyex2 (Fig. 1B). This plasmid has an inefficiently
transcribed leu2 gene leading to an unusually high copy number
under selective growth conditions.
-NTA agarose.
Proteins from 250 ml of cell-free culture supernatant were
batch-absorbed on 0.35-ml Ni
-NTA-agarose. The matrix
was washed and poured in a C10 column (Pharmacia), and proteins were
eluted by applying pH-steps as indicated. The fractions containing the
eluate at pH 4.0 were pooled (approximately 100 µg of procathepsin
B). C, purified procathepsin B analyzed by SDS-PAGE and
stained with Coomassie Blue. Lane 1, acidic elution protocol
as in B; lane 2, EDTA elution protocol (see text for
details).
peptide. This sequence promotes secretion of the mating
factor
in yeast cells. Processing by the KEX2-protease has been
reported to be a rate-limiting step in secretion(30) . In order
to best mimic the authentic KEX2-processing site
(Lys-ArgGlu-Ala), the Glu-Ala dipeptide which belongs to the
signal sequence of preprocathepsin B was not deleted during
construction of the fusion protein. Indeed, the fusion
proMF
-procathepsin B was never observed in the culture supernatant
of transformed yeast cells.Purification of Secreted Recombinant Procathepsin
B
The addition of a hexahistidine affinity tag to the carboxyl
terminus of procathepsin B enabled a purification using
Ni-chelate affinity chromatography introduced by
Hochuli et al.(31) for the purification of
recombinant E. coli proteins. We adapted this chromatographic
method to the purification of recombinant histidine-tagged proteins
secreted into the culture supernatant. The culture supernatant was
batch-adsorbed onto Ni
-NTA agarose, which was
subsequently loaded onto a column and eluted by applying pH steps (Fig. 2B). Alternatively, the procathepsin B can be
eluted from the column using the competitor imidazole or the chelator
EDTA.
, no addition of
protease inihibitor. The samples were analyzed by SDS-PAGE and
Coomassie Blue staining .
Structural Analysis
The amino termini of the
recombinant procathepsin B (proCb) and of the 35-kDa protein were
determined by amino acid sequencing. The amino terminus of procathepsin
B was found to be heterogeneous. Depending upon the preparation, the
major amino-terminal residues were Glu-1 or Val-6. In addition, two
minor products with the amino-terminal amino acids His-3 and Asn-8,
respectively, were detected (Fig. 4). The occurrence of products
lacking two amino-terminal residues will be discussed below. On the
other hand, the 35-kDa protein had a uniform amino terminus beginning
with Gly-49. The molecular mass of this protein, subsequently termed
intermediate cathepsin B (intCb), was calculated to be 32 kDa.
Gln, and has six additional carboxyl-terminal
histidine residues. These carboxyl-terminal residues are not removed
during expression when using the protease-deficient strain HT393. This
is demonstrated by the fact that metal-chelate purification was
feasible with this strain.
Enzymatic Analysis
Strikingly, neither the zymogen
nor intermediate cathepsin B was enzymatically active with small
synthetic cathepsin B-specific substrates such as
Z-Arg-Arg-pNA or Z-Lys-ONp. The lack of enzymatic activity
could not be explained by the presence of an inhibitory propetide,
since the propeptide (calculated molecular mass 5.6 kDa) was not
detectable in SDS-Tricine peptide gels. An inhibitory propeptide (K
= 0.4 nM) has been observed for
rat cathepsin B (37) .
HPO
, 50 mM citrate (43) in
the range of pH 2.5 to 8.0. The enzymatic reaction was started by the
addition of 0.8 mM Z-Arg-Arg-pNA. The standard
deviation of three assays is indicated.
and k with the
fluorogenic substrates Z-Arg-Arg-AMC and with other AMC derivates. We
found K
and k values which
are more than one order of magnitude higher than the previously
published kinetic data on schistosomal cathepsin B. However, the
enzymatic properties of the recombinant schistosomal cathepsin B are in
line with the better characterized mammalian cathepsin B (Table 2). Interestingly, schistosomal cathepsin B seems to
prefer Z-Arg-Arg-AMC, whereas rat and human cathepsin B prefers the
Phe-Arg derivate. Homology of primary structure between schistosomal
cathepsin B and mammalian counterparts and the comparable kinetic data
as well as similiar hemoglobin digestion patterns (Fig. 7)
suggest that the recombinant cathepsin B is functionally equivalent to
the native enzyme. In addition, recombinant cathepsin B from rat,
expressed and secreted by S. cerevisiae, as well as human
cathepsin B, expressed in E. coli, renaturated, and
pepsin-activated, were both fully functional(25, 45) .
/
-chains were digested with approximately 150 pmol of
pepsin-activated procathepsin B. The incubation was carried out in 10
mM DTT, 1 mM EDTA, 2 µM pepstatin A, 200
mM sodium phosphate, pH 6.0 at 37 °C. Aliquots were
withdrawn at various time intervals as indicated. The control digestion
reaction (lane C) contained 5 µM thiol-protease
inhibitor E-64 and was allowed to proceed for 16 h at 37 °C. The
digestion products were analyzed on a SDS-Tricine-polyacrylamide gel
(16.5% total, 6% cross-linking, (22) ). Lane M,
molecular mass standard.
-procathepsin B was processed completely by the
prohormone-processing enzyme KEX2, the recombinant protein displayed
microheterogenity at the amino terminus (Fig. 4). Occurrence of
the minor product with the amino-terminal residue His-3 can be
explained by partial processing with STE13, an aminodipeptidylpeptidase
which removes the spacer peptide Glu-Ala-(Glu/Asp)-Ala-Glu-Ala in three
steps during processing of mating factor
(40) . So far, we
have no explanation for the appearance of the products with the
amino-terminal amino acids Val-6 and Asn-8.Phe and schistosomal cathepsin B Met
Gly.
Strikingly, neither site is conserved (Fig. 4) nor do they
correspond with the specificity of cathepsin B, suggesting that the
spatial organization might be important. However, the position of the
processing sites differ by 19 amino acids. The mechanism of
autoprocessing of mammalian cathepsin B is not understood, but kinetic
data with propapain and human procathepsin B suggest that both
intramolecular and intermolecular proteolysis takes place in
vitro(35, 36) .
181 (1, hydroxyl/small aliphatic; 6, aliphatic; 8,
hydrophobic) revealed a low specificity toward primary structure. We
are currently trying to better define the substrate specificity of
schistosomal cathepsin B.
Tech, Bahnhofstrasse 6, D-35435 Wettenberg, Federal
Republic of Germany. Tel.:49-6406-9155-16; Fax: 49-6406-9155-77.
)
)
We thank M. Linder for help in HPLC purification of
peptides and mass spectrometric analysis, as well as critical reading
of the manuscript, and D. Linder and H. G. Welker for protein
sequencing. We appreciate the programming skills of A. Yu.
Leont'ev who wrote a computer programm calculating molecular
masses. Finally, we would like to thank J. H. Hegemann, M.
Bröker, and E. F. Ernst for useful hints concerning
yeast technology.
©1996 by The American Society for Biochemistry and Molecular Biology, Inc.
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