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Volume 271, Number 30, Issue of July 26, 1996 pp. 17666-17674
©1996 by The American Society for Biochemistry and Molecular Biology, Inc.

Differential Interactions of the CREB/ATF Family of Transcription Factors with p300 and Adenovirus E1A*

(Received for publication, January 18, 1996, and in revised form, May 1, 1996)

Jeng-Shin Lee Dagger , Xiaolin Zhang § and Yang Shi

From the Department of Pathology and Committee on Virology, Harvard Medical School, Boston, Massachusetts 02115

ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
FOOTNOTES
Acknowledgments
REFERENCES


ABSTRACT

The adenovirus E1A-associated protein p300 is a transcriptional cofactor that interacts with YY1 and mediates the relief of YY1 transcriptional repression by E1A. These observations raise the possibility that p300 may function as a bridging factor between E1A and cellular transcription factors. Here we show that p300, but not a mutant defective for binding to E1A, activated cAMP-responsive element-binding protein/activating transcription factor (CREB/ATF) binding site-mediated transcription in the presence of E1A. Among proteins that can recognize the CREB/ATF site, CREB appeared to be modulated by E1A in a p300 binding-dependent manner. This effect of E1A was correlated with a specific physical interaction between CREB and p300. These results suggest that p300 plays a crucial role in mediating the functional interplay between E1A and certain members of the CREB/ATF family. Two separate domains within p300 were identified that are capable of activating transcription. One of the domains interacted with the basal factor TFIIB, suggesting that p300 may function as a coactivator by making contacts with both sequence-specific transcription factors and the basal transcriptional machinery. This pivotal role of p300 may make it a prime target for viral proteins such as E1A in programming the cellular transcription machinery.


INTRODUCTION

The E1A region of human adenoviruses gives rise to two major alternatively spliced products, 12 S and 13 S mRNAs (1, 2, 3). The corresponding protein products are nuclear phosphoproteins of 243 and 289 amino acids, respectively (3, 4, 5, 6). Both polypeptides have identical amino- and carboxyl-terminal ends, the only difference being a region of 46 internal amino acids unique to the 13 S product (3). These proteins are the first viral polypeptides synthesized after adenovirus infection (7, 8). In addition to activating transcription of other adenoviral genes, E1A affects a whole array of host cell functions such as DNA synthesis and cell cycle progression (9, 10) to facilitate viral replication and propagation. E1A is also capable of immortalizing cells (11, 12), inducing full morphological transformation in cooperation with several oncogenes including the ras, polyoma middle T, and adenovirus E1B (13, 14, 15), and inhibiting terminal differentiation (16, 17). The diverse biological activities of E1A are attributable, at least in part, to its ability to modulate the cellular transcriptional machinery, since E1A has been shown to activate and repress a large number of cellular genes important for cell proliferation and differentiation (17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27).

Unlike conventional transcription factors, E1A does not recognize specific DNA sequences (5, 28), and the E1A-responsive promoters do not share common sequence elements (reviewed in Ref. 29). Therefore, it has been proposed that E1A must exert its transcriptional effects via multiple mechanisms that are likely to involve protein/protein interactions (29). Studies in the past several years have provided evidence that supports such an hypothesis. It has been shown that in some cases, a direct interaction between E1A and certain transcription factors targets E1A to the promoters for transcriptional activation (30, 31, 32, 33, 34). In other cases, the interaction appears indirect and is mediated by E1A-associated proteins, such as the RB family of proteins. Through its physical interactions with RB, E1A disrupts the RB·E2F complex (35), releasing free, active form of E2F for transcriptional activation (reviewed in Ref. 36).

Another protein that has been implicated in mediating the transcriptional effect of E1A is its associated protein p300 (37, 38). Genetic studies suggested that the ability of E1A to repress viral and cellular enhancers is dependent on the p300-binding domain of E1A (18, 19, 22, 23, 39, 40, 41). The cDNA that encodes the p300 protein was cloned, and direct evidence was obtained that demonstrated the involvement of p300 in E1A-mediated repression of the SV40 enhancer (42). P300 shares extensive sequence homology with the transcriptional coactivator CBP1 (<UNL>C</UNL>REB-<UNL>b</UNL>inding <UNL>p</UNL>rotein) (43, 44, 45). As predicted from the sequence comparison, p300 functions like CBP as a coactivator of CREB and is capable of mediating the effect of E1A on CREB (46, 47). Recently, by analyzing the ability of E1A and its mutant derivatives to convert the transcription factor YY1 from a repressor to an activator, we identified p300 as a bridging factor that mediates the functional interaction between YY1 and E1A (48).

The observation that p300 mediates the ability of E1A to modulate YY1 activity led us to ask whether p300 is a common cofactor that mediates the transcriptional effects of E1A. Promoter elements that were previously shown to respond to E1A were examined. One of the cis elements through which E1A exerts its transcriptional effects is the recognition sequence for the CREB/ATF family of proteins (49, 50). The consensus sequence of the CREB/ATF binding sites can serve as a recognition site for either homo- or heterodimers between members of the CREB/ATF and the AP-1 family of transcription factors (51, 52). One of the ATF family members, ATF2, has been shown previously to mediate E1A-induced transcriptional activation via a direct interaction with E1A (32).

In this paper, evidence is presented that p300 is involved in mediating the E1A-induced transcriptional activation via an ATF site (abbreviated as ATFf hereafter) taken from the fibronectin promoter (53, 57). In contrast, p300 failed to activate transcription via an Sp1 site in the presence of E1A. By gel shift/antibody supershift experiments, two CREB/ATF family members, CREB and ATF-1, were found to bind the ATFf site. Using a GAL4 fusion protein-based assay, CREB, but not ATF-1 or Sp1, was shown to respond to E1A in a p300 binding-dependent manner. This suggests that CREB, but not ATF-1, participates in the response of the ATFf site to p300/E1A-induced transcriptional activation. Consistent with this hypothesis, CREB, but not ATF-1 or Sp1, was shown to physically interact with p300 in HeLa cells. Interestingly, E1A activated CREB-mediated transcription in HeLa cells but repressed it in U2OS cells. The activation and repression functions of E1A on CREB-dependent transcription in different cells both required an intact p300 binding domain. To better understand the role of p300 as a cofactor of CREB-mediated transcription, experiments were initiated to analyze how p300 regulates transcription. Two separate domains of p300 were identified that activated transcription when targeted to a promoter via the heterologous GAL4 DNA-binding domain. One of these activation domains was shown to interact with the basal transcription factor TFIIB. These results suggest that p300 may function as a coactivator by making contacts with both sequence-specific DNA-binding transcription factors and the basal transcription machinery.


MATERIALS AND METHODS

Cells and Transfections

Cells were grown on 10-cm dishes in Dulbecco's modified Eagle's medium supplemented with 10% heat-inactivated calf serum (HeLa) or fetal calf serum (293 and U2OS). Transfections were performed by the calcium-phosphate precipitation method as described (54). The total amount of DNA was adjusted to be identical for each set of transfections. Cells were harvested 48 h after addition of the precipitates. All transfection assays were carried out with at least two independent DNA preparations and were repeated at least three times.

CAT Assays

Whole cell extracts were prepared from the transfected cells. CAT activity was assayed as described (54) and quantitated with a Beckman LS6500 scintillation counter. To ensure that CAT assays were performed within linear range, the proper amount of cell extracts was used to measure CAT activity. For instance, less extracts from cells transfected with stronger transactivators, such as GAL4-VP16 or GAL4-Sp1, were used for CAT reactions. For all the data presented, at least three independent transfections and CAT assays have been performed.

Plasmids

pATF-TA-CAT, pSp1-TA-CAT, pTA-CAT, and pTATAA-CAT are kind gifts of D. Dean (Washington University School of Medicine). Wild-type p300 expression plasmid and its parental vector were courtesy of R. Eckner and D. Livingston (Dana Farber Cancer Institute). The p300 mutant dl10 plasmid was described previously (48). pGAL4-p300 aa 1257-2414 was constructed by fusing a BglII/KpnI fragment from a pBluescript plasmid containing full-length p300 cDNA (42) into the pSG424 expression vector of the yeast transcription factor GAL4 DNA-binding domain aa 1-147 (55). The same region was taken from the p300 mutant dl10 (48) and cloned into pSG424. pGAL4-CREB is a gift of J. Licht (Mt. Sinai Medical School). pGAL4-ATF1 and -ATF2 are kind gifts of M. Green (University of Massachusetts Medical Center). pGAL4-Sp1 was provided by R. Tjian (University of California, Berkeley). E1A expression plasmids and the mutant derivatives were described previously (48) as were pGAL4-YY1 and pGAL4-E1BCAT (54). p300-VP16 was cloned into the RC/CMV expression vector (Invitrogen) with the activation domain of VP16 inserted into the NheI site (aa 2377) of p300 cDNA. pGST-p300 aa 1-596, aa 744-1571, and aa 1572-2414 were described before (48). pGAL4-Np300 (aa 1-596) and pGAL4-Mp300 (aa 744-1571) were constructed by cloning the p300 coding regions from the respective GST constructs into pSG424.

Gel Mobility Shift Assays

Nuclear extracts were prepared from 293 cells as described (56). The sequences of ATFf (57) and YY1 binding site (AAV P5 +1 site, Ref. 54) were described before. A typical binding reaction mixture contained labeled oligonucleotides (ATFf, 7 × 104 cpm; or YY1 binding site, 4 × 104 cpm), 1 µg of poly(dI-dC), 15 mM Hepes (pH 7.6), 5 mM dithiothreitol, 0.5 mM EDTA, 5 mM MgCl2, 30 mM KCl, 10% glycerol, and 8 µg of nuclear extracts in a final volume of 15 µl. The reaction mixture was incubated at room temperature for 20 min and analyzed by 4% native polyacrylamide gel electrophoresis. The specificity of the protein-DNA complexes was demonstrated by competition using unlabeled competitor oligonucleotides. To identify individual transcription factors involved in the complex formation, various antibodies were incubated with the nuclear extracts for 4 h at 4 °C before the addition of the probes. The results were visualized by autoradiography. Dr. M.-E. Lee (Harvard School of Public Health) kindly provided us with antibodies including alpha -ATF1 (C41-5.1, Santa Cruz, catalog sc-243), alpha -ATF2 (Upstate Biotechnology Inc., UBI, catalog 06-326), alpha -CREB (UBI, catalog 06-244), and alpha -c-Jun (UBI, catalog 06-115). The alpha -YY1 polyclonal antibodies are affinity-purified.

Analysis of Protein-Protein Interactions with GST Fusion Proteins

GST fusion proteins were induced and purified as described (58). TFIIB proteins were 35S-labeled and synthesized by in vitro translation reactions using the TNT kit (Promega). Labeled proteins were incubated for 2 h with various GST-p300 fusion proteins coupled to glutathione agarose beads (Sigma). The beads were washed five times with 0.1% Nonidet P-40 in phosphate-buffered saline, and protein complexes were eluted with Laemmli sample buffer. Following SDS-polyacrylamide gel electrophoresis, bound proteins were visualized by autoradiography.


RESULTS

p300 Mediates E1A-induced Transcriptional Activation through an ATF, but Not a Sp1 Binding Site

Previously, we demonstrated that p300 activates YY1 binding site-mediated transcription in 293 cells (which constitutively express E1A proteins) and that this function is dependent on the ability of p300 to interact with both YY1 and E1A (48). Together with several other lines of evidence, we proposed that p300 mediated the modulatory effects of E1A on the transcriptional activity of YY1 (48). We then wished to determine whether p300 is a general mediator of the transcriptional effects of E1A. Since a number of transcription factor binding sites have been demonstrated to mediate E1A responsiveness (reviewed in Ref. 29), we first asked whether, in the presence of E1A, p300 is capable of activating transcription of the reporter constructs previously shown to respond to E1A. The reporter CAT plasmids contain either an ATF site (ATFf) which was taken from the fibronectin promoter (nucleotide -176 to -161, Ref. 59) (pATF-TA-CAT) or an Sp1 consensus sequence (pSp1-TA-CAT) at -40 relative to the start site of transcription (Ref. 57, kind gifts of D. Dean). The parental vector pTA-CAT was derived from pTATAA-CAT which contains the fibronectin gene sequence from +8 to -36 (53). pTA-CAT is essentially the same as pTATAA-CAT except that the TATA element extending from -20 to -24 of the fibronectin gene promoter (TATAA) was replaced by the simian virus 40 (SV40) early gene TATA box equivalent TATTTAT, which has been shown not to respond to E1A (60). It has been shown that all reporters except pTA-CAT responded to E1A in transfection assays (57).

To determine whether the E1A response of these reporters may be mediated by p300, each reporter plasmid was cotransfected with a CMV-p300 expression plasmid into 293 cells. As shown in Fig. 1A, p300 selectively activated CAT expression from pATF-TA-CAT but not from the parental vector pTA-CAT (lanes 1-2, and 7-8), suggesting that the ATFf site may be responsible for the p300-induced activation. Importantly, the p300 mutant, p300 dl10, which is deleted of the E1A-binding domain (42, 48) was unable to activate the ATFf site-mediated transcription (Fig. 1A, lane 3). The result indicated that the interaction between p300 and E1A is critical for the observed transcriptional activation. This is consistent with the observation that, in HeLa and U2OS cells which do not express E1A proteins, overexpression of p300 had little effect on the activity of pATF-TA-CAT under the same assay condition (data not shown). These results supported the hypothesis that p300 is involved in mediating E1A-induced transcriptional activation through the ATFf site. Consistent with this notion, without the ATFf site, the parental vector pTA-CAT did not respond to E1A (57) and also failed to respond to p300 in this assay (Fig. 1A, lane 8). Interestingly, p300 also did not activate the other two reporters, pSp1-TA-CAT and pTATAA-CAT (Fig. 1A, lanes 5 and 11), which previously were shown to respond to E1A (57). These results suggest that E1A transactivates these reporters through alternative mechanisms that do not involve the p300 protein. In the case of pTATAA-CAT, it is likely that E1A, in particular the 13 S gene product, may activate the reporter by directly targeting the basal transcription factor TATA-binding protein (30, 31).


Fig. 1. A, wild-type p300 but not a mutant defective for interactions with E1A selectively activated transcription mediated by a CREB/ATF (ATFf) binding site. 6 µg of the expression plasmids encoding wild-type p300, p300 mutant dl10, or the parental vector were cotransfected with 8 µg of the individual reporter genes as indicated into 293 cells. The results were expressed as the average and standard deviation of three independent transfections and CAT assays. B, the deletion of aa 1679-1812 sustained by the p300 mutant dl10 did not compromise the ability of p300 to activate transcription when tethered to the promoter. The C-terminal half (aa 1257-2414) of the p300 protein and the same region from the mutant dl10 were fused to GAL4 DNA-binding domain. Two dosages of the fusion plasmids (2.5 and 5 µg) were cotransfected with 10 µg of the GAL4-E1BCAT reporter plasmid into HeLa cells. Relative CAT activities were calculated by normalizing the value of CAT conversion against the one obtained with the reporter gene alone. The relative activity 1 represents approximately 0.4% CAT conversion. The results were expressed as the average and standard deviation of three independent transfections and CAT assays.
[View Larger Version of this Image (14K GIF file)]

How does p300 activate transcription through the ATFf site in 293 cells? Previously, it has been shown that p300 has specific DNA binding activity for NF-kB/H2TF1-like sites (61), which bear no resemblance to the YY1 (48) or the ATFf site (this study) shown to respond to p300. In fact, accumulating evidence suggests that p300 may function in a more indirect way, i.e. as a transcriptional cofactor (42, 46, 47). If this property of p300 is indeed the mechanism by which p300 activates transcription, the failure of p300 dl10 to activate pATF-TA-CAT could also be due to a defect in its ability to function as a transcriptional coactivator. To address this issue, the ability of the carboxyl-terminal half of p300 (aa 1257-2414) and its mutant derivative containing the same internal deletion (aa 1679-1812) as p300 dl10 to regulate transcription was analyzed. The reporter plasmid pGAL4-E1BCAT contains five GAL4 DNA binding sites immediately upstream of the minimal adenovirus E1B promoter. pGAL4-E1BCAT has been widely used for studies of transcriptional activation, including E1A-induced transcriptional activation. As shown in Fig. 1B, both forms of p300, when fused to the GAL4 DNA-binding domain, activated transcription of the target gene GAL4-E1BCAT, whereas the GAL4 DNA-binding domain alone had virtually no effects (data not shown, Fig. 5). These data suggest that the carboxyl-terminal half of p300 may contain a functional domain for its transcriptional coactivator function, which is unaffected by the dl10 deletion mutation. Thus, the failure of p300 dl10 to activate pATF-TA-CAT in 293 cells is most likely due to its inability to interact with E1A. However, it is unclear at the present time why the p300 dl10 activated transcription better than the wild-type p300. Taken together, these results demonstrated that p300 is capable of mediating E1A-induced transcriptional activation via the ATFf but not the Sp1 site.


Fig. 5. The N- (aa 1-596) and C- (aa 1257-2414) terminal regions of p300 contain transcriptional activation domains. Three regions of p300 were fused to GAL4 DNA-binding domain. 5 µg of expression plasmids encoding each fusion protein (lanes 1-3) or the GAL4 DNA-binding domain alone (lane 4) were cotransfected with 10 µg of the GAL4-E1BCAT reporter into HeLa cells. One-tenth of the extracts from the cells transfected with GAL4-Np300 (aa 1-596, lane 1) were used for the CAT assays to ensure that the results were within the linear range.
[View Larger Version of this Image (19K GIF file)]

CREB and ATF-1 Bind the ATFf Site That Responds to p300 in 293 Cells

Since multiple CREB/ATF-related proteins can bind an ATF consensus site, we wished to determine which members of the CREB/ATF family bind the ATFf site that responded to p300 to activate transcription in 293 cells (Fig. 1A). An oligonucleotide representing the ATFf site was labeled with 32P and used in gel shift assays. As shown in Fig. 2, when the ATFf oligonucleotides were incubated with nuclear extracts prepared from 293 cells, two predominant complexes (labeled as A and B) were formed that were competed by molar excess of unlabeled ATFf but not by an unrelated YY1 oligonucleotide (lanes 1-7). Addition of alpha -ATF1 antibodies supershifted both the A and the B complexes whereas the alpha -CREB antibody supershifted only the A complex (Fig. 2, lanes 8 and 10). This suggests that the A and B complexes both contain ATF-1 while only the A complex contains CREB. In contrast, addition of alpha -ATF2, alpha -c-Jun, and alpha -YY1 antibodies had no effect on either the A or the B complexes (Fig. 2, lanes 9, 11, and 12). As a control, only alpha -YY1 antibodies abolished a YY1 complex (Fig. 2, lower panel, lane 12). Taken together, these results suggest that ATF-1 and CREB are the main components of the DNA-protein complexes formed on the ATFf site in 293 cells. However, these data do not rule out the possibility that other untested ATFs may also bind the ATFf site. In addition, the results do not differentiate whether the A complex is composed of ATF-1/CREB heterodimers or comigrating ATF-1 and CREB homodimers.


Fig. 2. CREB and ATF-1 bind the ATFf site that responds to p300 in 293 cells. Gel mobility shift assays were performed by using 293 nuclear extracts and the 32P-labeled ATFf binding site (upper panel) or YY1 binding site (lower panel) as the substrates. Increasing amount of unlabeled ATFf (lanes 2-4) or YY1 (lanes 5-7) binding site oligonucleotides were added as competitors. To detect individual proteins involved in the specific complex formation (A and B), various antibodies were added to the reactions as indicated (lanes 8-12). An asterisk indicates the new complex formed upon addition of alpha -CREB antibodies (upper panel, lane 10).
[View Larger Version of this Image (62K GIF file)]

The p300-binding Domain of E1A Is Critical for E1A to Modulate the Activities of CREB

Since both ATF-1 and CREB, and possibly other untested ATFs may bind the ATFf site, it was important to determine which one (or both) is responsible for the response of the ATFf site to the E1A-induced transcriptional activation via p300 (Fig. 1A). To address this issue, individual ATF family members were fused to the GAL4 DNA-binding domain and assayed for their ability to respond to E1A using pGAL4-E1BCAT as a target plasmid (54). As shown in Fig. 3, GAL4-CREB responded to E1A in a cell type-dependent manner. In U2OS cells, E1A, especially the 12 S gene product, repressed GAL4-CREB-mediated transcription (Fig. 3A, lanes 1 to 3). In contrast, in HeLa cells, 12 S E1A activated GAL4-CREB-mediated transcription (Fig. 3B, lane 4), albeit to a lesser extent compared with 13 S E1A (Fig. 3B, lanes 1 and 2). The quantitative difference between the effects of the 12 S and 13 S E1A is most likely attributable to the 46 amino acids (CR3) unique to the 13 S E1A, which is a known transcriptional activation domain (62). With this activation domain, 13 S E1A is often found to be a more potent transactivator than the 12 S E1A (24, 25, 26, 27, 35, 63), as also observed in Fig. 3B. Perhaps by the same token, lack of this domain may explain why the 12 S product repressed CREB activity in U2OS cells more efficiently (Fig. 3A, compare lanes 2 and 3). The repressive effect of E1A on CREB-mediated transcription observed in U2OS cells is in line with the recent reports that E1A represses CREB-activated transcription in U2OS cells (46) and in mouse F9 cells (47). In the same assay, GAL4-ATF1-mediated transcription was unaffected by E1A in either cell type, consistent with the previous report (64). These results suggest that CREB, but not ATF-1, contributed to the observed activation of the pATF-TA-CAT by p300 in 293 cells (Fig. 1A).


Fig. 3. An intact p300-interacting domain is required for E1A to modulate CREB-mediated transcription. A, wild-type 12 S but not a mutant defective for interacting with p300 repressed CREB-mediated transcription in U2OS cells. 5 µg of pGAL4-CREB (lanes 1-5) or pGAL4-ATF-1 (lanes 6-8) was cotransfected with 10 µg of the pGAL4-E1BCAT reporter plasmids and 1 µg of expression plasmids encoding wild-type E1A or various mutant derivatives into U2OS cells. FS, frameshift mutant expressing the first 22 amino acids of E1A. B, deletion of aa 2-36 abolished the ability of 13 S E1A to activate CREB-mediated transcription in HeLa cells. 5 µg of pGAL4-CREB (lanes 1-4) or pGAL4-ATF1 (lanes 5-7) was cotransfected with 10 µg of the pGAL4-E1BCAT reporter plasmids and 1 µg of expression plasmids encoding wild-type E1A or various mutant derivatives into HeLa cells. C, cotransfection of E1A did not produce significant effects on Sp1-mediated transcription. 5 µg of pGAL4-Sp1 and 10 µg of the pGAL4-E1BCAT reporter were cotransfected with 1 µg of E1A expression plasmids as indicated into U2OS (lanes 1-3) or HeLa (lanes 4-6) cells. Transfections and CAT assays were performed as described under ``Materials and Methods.'' The results were expressed as the average and standard deviation of three independent transfections and CAT assays.
[View Larger Version of this Image (20K GIF file)]

Mutational analyses of the domains of E1A showed that the ability of E1A to modulate CREB-mediated transcription correlated with its ability to bind p300. As shown in Fig. 3A, while wild-type 12 S E1A repressed the activity of GAL4-CREB in U2OS cells (lane 3), the point mutant RG2 which is impaired for binding to p300 (41, 65) failed to do so (lane 4). As a control, a double point mutant pm47/124 defective for binding to RB/p107 (41) repressed CREB-mediated transcription to the wild-type level (lane 5). These results suggest that the ability of E1A to bind p300 is crucial for its ability to repress CREB-mediated transcription in U2OS cells. Interestingly, the ability of 13 S E1A to activate CREB-mediated transcription in HeLa cells was also dependent on an intact p300-interacting domain as deletion of aa 2-36 virtually abolished this ability (Fig. 3B, compare lanes 2 and 3). These results suggest that the interaction of E1A with p300 is important for E1A to modulate the transcriptional activities of CREB. The implication of the p300 involvement in this process is consistent with the functional assays performed in 293 cells (Fig. 1A). The finding that regulation of CREB activity by E1A is mediated by p300 is consistent with the results published in two recent reports (46, 47). Our results further suggest that the outcome of the CREB/E1A interaction mediated by p300 may vary depending on the cell types.

In Fig. 1A, we showed that p300 did not transactivate Sp1 binding site-mediated transcription in 293 cells (Fig. 1A, lane 5). Here, the effect of E1A on GAL4-Sp1-dependent transcription was examined. As shown in Fig. 3C, GAL4-Sp1-mediated transcription was only slightly repressed by both 12 S and 13 S E1A in both cell types. Transcription mediated by another artificial activator, GAL4-VP16, was also unaffected by E1A (data not shown) (66). These results attest to the specificity of the functional interaction observed among CREB, p300, and E1A.

To determine whether CREB in its native form can also be modulated by E1A through p300, expression plasmids encoding CREB and p300 were transfected either alone or in combination with E1A and the reporter pATF-TA-CAT into HeLa cells. As shown in Fig. 4, 13 S E1A activated pATF-TACAT in HeLa cells (Fig. 4, compare lane 5 with 1). Importantly, this activation was dependent on the p300-binding domain of E1A as mutations that abrogated p300 binding also abolished the ability of E1A to activate the reporter (Fig. 4, compare lane 5 with lanes 6 and 7). This result suggested the involvement of p300 in this E1A-induced activation and is consistent with the finding presented in Fig. 3B in which the stimulatory effect of E1A on GAL4-CREB-mediated transcription was shown to be dependent on the p300 binding domain of E1A. Since E1A had no stimulatory effect on pTA-CAT (Ref. 57 and data not shown), the E1A-induced activation of pATF-TA-CAT is mostly likely mediated by the ATFf site. As shown in Fig. 4, CREB and p300, when transfected alone (lanes 2 and 3) or together (lane 4), did not result in a significant activation of the reporter under our assay condition. Since HeLa cells contain both endogenous CREB and p300,2 one explanation for the lack of activation is that the two proteins are not limiting for transcription of pATF-TA-CAT in HeLa cells. Indeed, when CREB was directed to the promoter of pGAL4E1BCAT via the GAL4 DNA-binding domain fused to its N terminus, the GAL4-CREB fusion protein was shown to activate GAL4-E1BCAT and to respond to E1A activation (Fig. 3).


Fig. 4. Wild-type 13 S E1A, not the mutants defective for interacting with p300, activates ATFf-mediated transcription in HeLa cells. HeLa cells were transfected with 10 µg of pATF-TA-CAT, 6 µg of pCMV-p300, 4 µg of pRSV-CREB, and 2 µg of either pCMV-13 S E1A wild-type, or pCMV-13 S E1A RG2, pCMV-13 S E1A dl2-36, pCMV-E1A FS. The presence of a given plasmid in a specific transfection is indicated with a +. The results were expressed as the average and standard deviation of three independent transfections and CAT assays. FS, frameshift mutant expressing the first 22 amino acids of E1A.
[View Larger Version of this Image (13K GIF file)]

Taken together, these results suggested that the ability of E1A to interact with p300 is critical for E1A to activate transcription mediated by GAL4-CREB (Fig. 3, A and B) and the CREB/ATF binding site (Fig. 4) in HeLa cells.

Physical Interactions between p300 and the CREB/ATF Family of Proteins

The fact that E1A modulates the activity of a transcription factor (such as CREB) in a p300 binding-dependent manner predicts a physical interaction between p300 and this transcription factor. To test this hypothesis, we analyzed potential protein/protein interactions between p300 and members of the CREB/ATF family in HeLa cells using the ``two-hybrid'' assay (67). This approach utilizes various CREB/ATF members fused to the DNA-binding domain of GAL4 as ``baits'' and p300/VP16 (p300 fused to the herpes simplex virus VP16 activation domain) as a ``prey.'' As summarized in Table I, p300/VP16 further activated transcription mediated by GAL4-CREB (lane 3) but not by GAL4-ATF1 (lane 4) or GAL4-ATF2 (lane 5). As a positive control, p300/VP16 activated GAL4-YY1-mediated transcription as reported (lane 2, Ref. 48). GAL4-Sp1 failed to respond to p300/VP16 as expected, since p300 was not able to activate Sp1 site-dependent transcription in 293 cells (Fig. 1A). In addition, p300/VP16 failed to activate target gene transcription when the GAL4 DNA-binding domain alone (lane 1) or GAL4-VP16 (lane 7) was used as the bait. These results suggest that p300 physically interacts with CREB in vivo, which is consistent with the in vitro biochemical evidence published previously (47), and fulfilled the prediction from our functional analyses described earlier (Fig. 3). In this assay, p300 did not interact with ATF-1 or Sp1. The lack of a physical interaction between p300 and these two proteins is in line with the finding that ATF-1- or Sp1-mediated transcription was unaffected by E1A (Fig. 3, Ref. 64). We have also not been able to detect an interaction between p300 and ATF2 with the two-hybrid assay in HeLa cells (Table I, row 5). Together with the previous observations (32, 64), it appears that the activation of ATF2-mediated transcription by E1A is most likely to be independent of p300. Taken together, these results demonstrated physical interactions between p300 and two transcription factors, CREB and YY1, whose activities were modulated by E1A in a p300-dependent manner (Fig. 3, Ref. 48).

Table I.

CREB interacted with p300 in mammalian two-hybrid assays

5 µg of GAL4 fusion plasmids and 10 µg of the GAL4-E1BCAT reporter were cotransfected with 5 µg of either p300-VP16 expression plasmids or the parental RC/CMV vector (v) into HeLa cells. Transfections and CAT assays were carried out as described under ``Materials and Methods.'' Less extracts from the cells transfected with GAL4-Sp1 and -VP16 were used to ensure that CAT activities were measured within linear range.

The N- and the C-terminal Portions of p300 Are Capable of Activating Transcription

The evidence provided in this study is consistent with the notion proposed by several recent reports that p300 may function as a transcriptional coactivator (42, 46, 47, 48, 66). To understand the mechanisms that underlie the ability of p300 to regulate transcription, we undertook a study to identify domains of p300 that are involved in transcriptional regulation. The p300 protein was divided into three parts, each of which was fused to the GAL4 DNA-binding domain. As shown in Fig. 5, the N- (aa 1-596) and C-terminal (aa 1257-2414) portions of p300 induced significant activation of the reporter plasmid pGAL4-E1BCAT, while the central portion of p300 (aa 744-1571) weakly activated transcription, if at all. We then asked whether the transcriptionally active domains of p300 interacted with basal transcription factors. Individual basal factors were in vitro translated and tested for their interactions with the N- or C-terminal or the central portions of p300, each individually fused to the glutathione S-transferase (GST). As shown in Fig. 6, TFIIB was specifically retained by the C-terminal portion of p300. Similarly, it has been shown that a homologue protein of p300, CBP, also interacts with TFIIB (44). Therefore, as a transcriptional coactivator, p300 may serve as a bridging protein between the sequence-specific transcription factors (e.g. CREB and YY1) and proteins (e.g. TFIIB) that are part of the basal transcription machinery. Since the N-terminal region of p300 activated transcription but failed to interact with TFIIB, the mechanism underlying its activation potential is likely to be different from that of the C-terminal region. Experiments are underway to evaluate the functional significance of the p300/TFIIB interaction.


Fig. 6. TFIIB specifically interacts with the C-terminal region of p300 in vitro. Three regions of p300 were fused to glutathione S-transferase (GST). The fusion proteins were coupled to glutathione-agarose beads and purified from bacteria. In vitro translated, 35S-labeled TFIIB was incubated with each p300 fusion protein (lanes 3-5) or the GST moiety alone (lane 2). After extensive washing, the protein complexes were eluted from the beads and separated by SDS-polyacrylamide gel electrophoresis. The same amount of labeled TFIIB used in the binding reactions was loaded in the input lane (lane 1).
[View Larger Version of this Image (33K GIF file)]


DISCUSSION

In this report, we have identified the critical protein components that are involved in the responsiveness of an ATF site (ATFf) to the E1A-dependent transcriptional activation by p300. In 293 cells, two CREB/ATF family of proteins, CREB and ATF-1 bind the ATFf site (Fig. 2). However, when analyzed individually in the GAL4 fusion protein-based assays, only the CREB protein was found to be responsive to E1A in a p300 binding-dependent manner (Fig. 3). This suggests that p300/E1A activates the ATFf site-mediated transcription through CREB but not ATF-1. Several lines of evidence suggest that p300 is involved in the response of CREB to E1A. First, overexpression of p300, but not the E1A-binding defective mutant dl10, activated the ATFf site-dependent transcription in the presence of E1A (Fig. 1A). Second, wild-type E1A, but not the mutant derivatives defective for binding to p300, is capable of modulating GAL4-CREB-mediated transcription (Fig. 3). Third, p300 interacts with CREB in vivo (Table I). Taken together, the results strongly suggest that p300 is an important mediator of the functional interaction between CREB and E1A.

In a separate study, we identified p300 as a coactivator for c-Jun and JunB, the major components of the AP-1 transcription factor, and demonstrated that E1A modulates the activities of the Jun proteins via its interactions with p300 (66). Significantly, in U2OS cells, overexpression of p300 rescues both Jun- and CREB-dependent transcription that is repressed by E1A. This lends further support to the contention that, like CBP, p300 may function as a transcriptional cofactor for CREB and that E1A targets CREB via p300 and CBP. These conclusions are consistent with the recent reports demonstrating the functional interactions among CREB, p300, and E1A (46, 47).

Our gel shift/antibody supershift experiments (Fig. 2) clearly demonstrated that both CREB and ATF-1 bind to the ATFf site that is responsive to p300/E1A for transcriptional activation. However, E1A only affected CREB- but not ATF-1-mediated transcription. This is intriguing since, among members of the CREB/ATF family, CREB and ATF-1 are closely related with sequence homology extending beyond the leucine zipper region (68, 69). Despite the sequence similarity, the two proteins clearly behaved differently in terms of their interactions with p300 (Table I) and their response to E1A (Fig. 3). It has been noted that CREB and ATF-1 are most divergent in their sequences at the N-terminal region (68, 69). The sequence divergency was proposed to account for the different transcriptional activities of ATF-1 and CREB in the cAMP signaling pathway observed before (69). Perhaps this structural difference also dictated the differential interactions of CREB and ATF-1 with p300, hence the differential response to E1A. Finally, it is also possible that the failure to detect an ATF-1 response to p300/E1A is due to the assay conditions. For instance, the interactions of p300 with ATF-1 may require specific posttranslational modifications of the ATF-1 and/or p300 proteins. Interestingly, it has been noted that, while the recognition sites for cAMP-dependent protein kinase (PKA) and Ca2+-calmodulin-dependent protein kinases I and II are conserved between these two proteins (68, 69), calmodulin-dependent protein kinase II phosphorylates an additional site on ATF-1 in vitro (69, 70). Whether this difference between the two proteins contributes to their differential interactions with p300 awaits future study.

In the GAL4 fusion protein-based assays, CREB-mediated transcription was repressed by E1A in U2OS cells (Fig. 3A). In contrast, CREB-dependent transcription was activated by E1A in HeLa cells (Fig. 3B). The apparent opposing effects of E1A are not unprecedented. The ability of E1A to repress and to activate transcription has been amply documented (17, 18, 20, 21, 22, 23, 24, 25, 26, 27, 40, 63). However, the precise mechanism underlying this phenomenon is unclear and warrants further studies. Recently, we have analyzed a number of transcription factors for their response to E1A. Some of these transcription factors are up-regulated by E1A, such as YY1 (48, 54, 58) and CREB (this study, in HeLa cells), and others are down-regulated, such as c-Jun and JunB (66, 71). Interestingly, in all these cases, the ability of E1A to modulate the activity of these transcription factors is dependent on the ability of E1A to bind p300. When the E1A response of these proteins was further examined, CREB is the only protein whose activity was found to be both up- and down-regulated by E1A in different cell types, in a manner that is dependent on p300. Thus, it is possible that a better understanding of the CREB-mediated transcription in different cells and the precise role of p300 may provide insight into the mechanism of the dual transcriptional activities of E1A.

Previously, it has been shown that CREB is activated by protein kinase A (PKA) (72, 73, 74). To test whether PKA may play a role in the apparent cell-type dependent E1A responses of CREB-mediated transcription, we performed similar experiments as in Fig. 3, A and B, with cotransfection of a PKA expression plasmid (courtesy of R. Goodman, Oregon Health Sciences University). As reported (72, 73, 74), cotransfection of 1.5 µg of the PKA expression plasmid enhanced CREB activity by about 10-fold in both cell types. PKA, however, did not change the response of CREB to E1A in these cells, i.e. the PKA-stimulated CREB activity was still activated by E1A in HeLa cells and repressed by E1A in U2OS cells.2

As another attempt to understand CREB-mediated transcription, we also analyzed the transcriptional activity of the coactivator protein p300. Our results identified two main activation domains that are located at the N- and C-terminal regions of p300 (Fig. 5). Compared with the C-terminal region, the N-terminal domain of p300 appeared to be more potent in activating transcription. In contrast, the central region of p300 barely activated transcription in the same assay. The basis for this apparent difference in the ability of the different parts of p300 to activate transcription is unclear. However, it is interestingly to note that the C- but not the N-terminal or the central portion of p300 interacted with the basal transcription factor TFIIB (Fig. 6). Our finding is consistent with the recent report that demonstrated that the same region of CBP that shares significant homology with p300 also interacted with TFIIB (44). Since the N-terminal region of p300 also contains a transcriptional activation domain, it is predicted that it is likely to do so via a mechanism that is distinct from that of the C-terminal region. Indeed, p300 has been shown to be a component of the TATA-binding protein complex (75). The finding that p300 binds TFIIB directly fulfills one of the criteria expected of a transcriptional cofactor, i.e. serving as a bridging protein between the basal transcriptional machinery and the sequence-specific DNA-binding transcription factors. It is worth cautioning, however, that the data demonstrating the interaction between p300 and TFIIB are preliminary. Further experiments are necessary to demonstrate an in vivo p300/TFIIB interaction and to determine whether this physical interaction is indeed correlated with the ability of p300 to activate transcription.


FOOTNOTES

*   This work was supported by National Institutes of Health Grant GM53874 (to Y. S.). The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked ``advertisement'' in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Dagger    Present address: Children's Hospital, 320 Longwood Ave., Boston, MA 02115.
§   Recipient of Postdoctoral Fellowship GM 18221 from the National Institutes of Health.
   Recipient of a Junior Faculty Research Award from the American Cancer Society. To whom correspondence should be addressed: Dept. of Pathology and Committee on Virology, Harvard Medical School, 200 Longwood Ave., Boston, MA 02115. Tel.: 617-432-4318; Fax: 617-432-1313; E-mail: yshi{at}warren.med.harvard.edu.
1   The abbreviations used are: CBP, CREB binding protein; CREB, cAMP-responsive element-binding protein; ATF, activating transcription factor; CAT, chloramphenicol; aa, amino acid(s); GST, glutathione S-transferase; PKA, protein kinase A.
2   J.-S. Lee and Y. Shi, unpublished results.

Acknowledgments

We thank members of the laboratory for critical reading of the manuscript and their helpful comments. We are grateful for the gifts of plasmids from Douglas Dean (Washington University School of Medicine), Jon Licht (Mt. Sinai Medical School), Robert Tjian (University of California, Berkeley), and Mike Mathews (Cold Spring Harbor Laboratory). We would like to thank Mu-En Lee (Harvard School of Public Health) for sharing with us the alpha -ATF antibodies.


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C. Albanese, M. D'Amico, A. T. Reutens, M. Fu, G. Watanabe, R. J. Lee, R. N. Kitsis, B. Henglein, M. Avantaggiati, K. Somasundaram, et al.
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