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Volume 271, Number 33, Issue of August 16, 1996 pp. 19781-19788
©1996 by The American Society for Biochemistry and Molecular Biology, Inc.

Cloning and Characterization of a Glucocorticoid-induced Diacylglycerol Kinase*

(Received for publication, March 25, 1996, and in revised form, May 23, 1996)

Theresa M. Klauck , Xuequn Xu , Betty Mousseau and Susan Jaken Dagger

From the W. Alton Jones Cell Science Center, Lake Placid, New York 12946

ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
FOOTNOTES
REFERENCES


ABSTRACT

Diacylglycerol kinase (DGK) plays a key role in cellular processes by regulating the intracellular concentration of the second messenger diacylglycerol. We screened a hamster DDT1 smooth muscle cell library and isolated a unique, glucocorticoid-inducible cDNA with substantial homology to known DGKs. DGK activity was increased in lysates of insect cells infected with recombinant baculovirus containing this cDNA. Antibodies raised against expressed sequences recognized a glucocorticoid-inducible 130-140-kDa protein on immunoblots of DDT1 cell lysates. Thus, this sequence appears to be a new member of the DGK family that we refer to as DGKeta . Homology to other DGKs was apparent in domains that are thought to be important for DGK function including the cysteine-rich motifs and potential catalytic domains. DGKeta shares substantial homology with DGKdelta including the N-terminal pleckstrin homology domain. The tissue distribution of DGKeta message (determined by ribonuclease protection assays) and protein (determined by immunoblots) was broader than reported for other DGKs, indicating that DGKeta may play a more general role in regulating cellular DG levels than other DGKs. Heterogeneity among DGK family members indicates that individual DGKs may have unique functions.


INTRODUCTION

Diacylglycerol (DG)1 is a neutral lipid that regulates a variety of intracellular processes. One important function is as a second messenger that regulates activity of protein kinases C (PKCs), a multienzyme family of serine/threonine kinases important for cell growth and differentiation (1, 2). DG has also been shown to regulate cytoskeletal structures, e.g. DG directly stimulates actin nucleation and, hence, polymerization (3). Furthermore, DG is a key intermediate in lipid metabolic pathways for phospholipid, prostaglandin, and leukotriene synthesis. Thus, regulation of intracellular DG levels is critical for normal cellular function. One of the major routes of DG metabolism is via DG kinase (DGK) that phosphorylates DG to generate phosphatidic acid (4). Recent evidence indicates that phosphatidic acid and its metabolite lysophosphatidic acid may be second messengers as well (5, 6, 7, 8). Thus, DGK has two important functions, first, to limit cellular levels of DG and second, to generate additional second messengers.

Several DGK activities have been purified or partially purified (4, 9), and a number of DGK and DGK-related clones have been isolated (10, 11, 12, 13, 14, 15, 16, 17, 18). DGKs appear to differ with respect to their molecular weight, cofactor regulation, tissue distribution, and substrate specificity; however, direct comparisons of DGK activities have been hampered by the lack of a standard assay technique and availability of specific antibodies. Alignment of DGK sequences has been used to identify motifs that may be important for DGK function and regulation. These include two calcium-binding EF hands that confer calcium-dependent activity (19), two cysteine-rich motifs (CRMs) that are similar to those found in PKC and Raf kinase (2), and a putative catalytic domain in the C-terminal half of the protein. The CRMs and the putative catalytic domain sequences are conserved in all DGKs including those from Drosophila (14) and Caenorhabditis elegans (13). Genetic analysis of Drosophila rdgA mutants has linked mutations in the DGK2 gene to retinal degeneration (20) indicating that this retinal specific form of DGK is essential for normal retinal function. Specific functions of other DGKs have not yet been identified.

In the course of studying PKCalpha regulation in hamster DDT1 smooth muscle cells, we identified a high molecular weight, glucocorticoid-inducible protein (referred to as DGKeta ) that cross-reacted with a PKCalpha -specific monoclonal antibody. Because of the possibility that this could have been a unique form of PKC, we immunoscreened a glucocorticoid-induced DDT1 cell cDNA library with the PKCalpha antibody. Several clones were isolated, none of which had appreciable homology to PKCs or other protein kinases. However, they were homologous to DGK sequences within CRMs and the putative catalytic domains. Expression of a partial cDNA confirmed that the sequence encodes a DGK activity. Our results demonstrate that DGKeta is a unique form of DGK with broad tissue distribution. Differences from previously reported DGKs suggest that DGKeta may have a specific role in cellular DG metabolism.


EXPERIMENTAL PROCEDURES

Materials

Male Syrian hamsters weighing 100-150 g were purchased from Charles River Breeding Lab Inc., Wilmington, MA. Fetal bovine serum, Dulbecco's modified Eagle's medium, and Ham's F12 were from Life Technologies, Inc. Insulin and transferrin were from Sigma. Vitrogen 100 was from Collagen Corp., Palo Alto, CA. Escherichia coli diacylglycerol kinase was from Lipidex, Inc., Westfield, NJ. 1,2,-Dioctanoyl-sn-glycerol (diolein) was from Avanti Polar Lipids, Inc., Alabaster, AL. [gamma -32P]ATP (3000 Ci/mmol) and [alpha -32P]UTP (3000 Ci/mmol) were from DuPont NEN. All restriction enzymes, Taq polymerase, Prime-a-Gene Kit, and alkaline phosphatase-conjugated goat anti-rabbit or anti-mouse immunoglobulins were from Promega, Madison, WI. The MAXIscript T7/T3 in vitro transcription and RPA II Kits were from Ambion, Austin, TX. The TA Cloning Kit was from Invitrogen Corp., San Diego, CA. ECL Western blot reagents were from Amersham Corp. Affi-Gel 10 and protein assay reagents were from Bio-Rad. NitroPLus was from Micron Separations Inc., Westborough, MA. Recombinant baculovirus expressing PKCalpha was a kind gift from Dr. R. Bell, Duke University Medical Center, Durham, NC. All other reagents not listed were of the highest quality and from the best source possible.

cDNA Cloning and Sequencing

A Lambda Zap II expression library (kindly provided by Dr. Steve Harris, University of Texas, San Antonio) prepared from glucocorticoid-induced DDT1 cells was immunoscreened with a PKCalpha -specific monoclonal antibody (M6) (21) according to standard protocols. Three positive clones were isolated out of two million plaques screened. Bluescript® SK phagemid (pSK) containing the positive inserts were excised from lambda phage and used for sequencing. Additional clones were isolated by rescreening the library with 32P-random-labeled cDNA probes prepared from pSK4 (see Fig. 2) according to standard protocols. To obtain additional 5' sequences, a second DDT1 library (kindly provided by Dr. Jim Norris, Medical University of South Carolina, Charleston, SC) was screened with a cDNA probe prepared from a 5' fragment of pSKA21, (pSKA21a) and two identical overlapping clones were isolated. mRNA from glucocorticoid-treated DDT1 cells was used as a template in 5' RACE protocols to obtain additional 5' sequence according to the method of Frohman et al. (22). The sequences of the three nested gene-specific antisense primers designed to the 5' end of the target cDNA (pSKA21) were as follows: GP16 (5'-AGGTCGCTCTACAGAAAC-3'), GP17 (5'-CAACAGAGGGCTGACAA-3'), and GP18 (5'-TACACACCGCCTGCAAAGAT-3'). The final product was gel-purified, blunt-ended, and subcloned into pSK for further sequencing.


Fig. 2. Schematic map of DGKeta clones. A composite of DGKeta cDNA (4.793 kb) was constructed by combining sequences from the overlapping clones (specifically pCRII5'R4, pSK5'R1, and clone pSKB24). The box and line indicate the coding region and noncoding sequences, respectively. CRM, cysteine-rich motif; Cat A/B, catalytic subdomains (putative).
[View Larger Version of this Image (11K GIF file)]

Both 5' RACE and inverse PCR strategies were used to obtain the remaining 5' end. The 5' Amplifinder RACE kit (Clontech Laboratories, Inc., Palo Alto, CA) was used with GP45 (5'-TCATAGGGTTCTCTGCTCTGTACTGAC-3') for reverse transcription and the nested primer GP23 (5'-GCTGATCCAGTCTTCCATCT-3') and an anchor primer for amplification. For inverse PCR, cDNA was reverse-transcribed from GP43 (5'-CTCTCTGCTGCACACATTACAGAATGTGGG-3') and ligated intramolecularly to form a closed circular double-stranded DNA molecule. This was amplified by PCR using a sense primer GP26 (5'-TGTCGCTGAAGCAAGCAC-3') and an antisense primer GP62 (5'-GGGAAACCGCGCTGGTCCCAACGG-3') to obtain unknown 5' sequence (23). The PCR products from 5' Amplifinder and inverse PCR were cloned directly into pCRII with the TA Cloning kit.

Inserts of positive clones were sequenced on both strands using a combination of manual and automated dideoxy-chain termination reactions. A USB Sequenase Version 2.0 kit was used for the manual sequencing. Automated sequencing was done using an Applied Biosystems 370A Automated DNA Sequencer (Applied Biosystems, San Francisco, CA) using either dye-primer or dye-terminator protocols. Double-stranded DNA for sequencing was prepared by Promega Magic Miniprep columns. Sequencing data were analyzed using GeneWorks (IntelliGenetics, Inc., Mountain View, CA) and DNASIS (Hitachi Software Engineering America, Ltd., Brisbane, CA).

Source of Primary Antibodies

The M6 monoclonal antibody used in this study was prepared to purified rabbit PKCalpha and recognizes the catalytic domain of PKCalpha (21). The antipeptide antibody AJ10 was prepared to a synthetic peptide consisting of the 15 C-terminal amino acids of the DGKepsilon predicted amino acid sequence. AJ10 antisera was purified against the peptide coupled to Affi-Gel 10 (Bio-Rad). The polyclonal antibodies AJ12 and AJ21 were raised in rabbits against purified fusion proteins produced in bacteria expressing the pSK4 or the pSKA21b insert, respectively. The pSK4 insert was expressed as a glutathione S-transferase fusion protein from a pGEX3X vector (Pharmacia Biotech Inc.) and purified by electroelution. Subclone A21b was expressed as a histidine-tagged fusion protein from pQE31 (Qiagen, Inc., Chatsworth, CA) and purified under nondenaturing conditions with a nickel affinity column according to the Qiagen protocol. Both antisera were affinity purified on Affi-Gel-10 columns containing the cognate fusion protein.

Western Blots

Proteins were separated by SDS-polyacrylamide gel electrophoresis (7.5% unless indicated otherwise) (24). The proteins were transferred to NitroPlus, and blots were immunostained as described previously (25) and developed with either alkaline phosphatase substrates or enhanced chemiluminescence reagents.

Cell Culture

Hamster DDT1-MF2 cells (kindly provided by Dr. Steve Harris, University of Texas, San Antonio) were plated at a density of 1 × 106 cells/150-mm tissue culture dishes coated with 10 µg/ml Vitrogen. Cells were maintained in 1:1 Dulbecco's modified Eagle's medium/F12 supplemented with 5 µg/ml insulin, 5 µg/ml transferrin, 3 × 10-8 M selenium (DFITS), 100 units/ml penicillin, 0.1 mg/ml streptomycin, and 1% 2 × charcoal-stripped fetal bovine serum (CSFBS). For glucocorticoid-induction experiments the cells were plated at 1 × 104 cells/cm2 on 100-mm tissue culture dishes coated with Vitrogen and grown in DFITS + 1% 2 × CSFBS. Triamcinolone acetonide (TAA, 1 × 10-8 M) was added after 3 days where indicated. Cell lysates were collected in lysis buffer (0.25 M sucrose, 25 mM Tris-Cl, pH 7.4, 2.5 mM magnesium acetate, 1 mM dithiothreitol, 2.5 mM EGTA, 10 µg/ml leupeptin, 1 mM phenylmethylsulfonyl fluoride, 10 µg/ml aprotinin) and prepared for electrophoresis.

Baculovirus Expression

A partial DGKeta construct (pSKDGKeta -p) was prepared in pSK by ligating together pSK5'R1 and pSKB24 using convenient restriction sites (see Fig. 2 for a schematic map of DGKeta clones). The total size of the insert was 4.112 kb, and the predicted protein size was 116 kDa corresponding to an open reading frame of 3.1 kb. This insert was cloned into the pBlueBacHisC transfer vector (Invitrogen Corp., San Diego, CA) for preparation of recombinant baculovirus (BvDGKeta -p). The full-length DGKeta baculovirus (BvDGKeta ) was constructed by addition of a pCRII5'R4 fragment to the 5' end of pSKeta Kepsilon -p. Subsequently, the BamHI/HindIII fragment containing the full-length DGKeta coding region was cloned into pBlueBacHisA for preparation of recombinant baculovirus.

Recombinant baculoviruses were prepared by cotransfecting the transfer vector (0.4 µg) with linearized baculovirus DNA (0.1 µg) (Baculogold from Pharmingen, San Diego, CA) in Sf9 insect cells with Lipofectin (Life Technologies, Inc.). For expression studies, Sf9 cells were infected with the viral stock and collected 3 days post-transfection in sucrose/ATP buffer containing 0.25 M sucrose, 25 mM Tris-Cl, pH 7.4, 0.05 mM ATP, 0.5 mM dithiothreitol, 2.5 mM EGTA, 10 µg/ml leupeptin, 1 mM phenylmethylsulfonyl fluoride, and 10 µg/ml aprotinin. Protein values were determined by the method of Bradford (26).

DGK Assay

The DGK assay was carried out as described previously with some minor changes (27). Samples were collected in sucrose/ATP buffer described above. The assay was performed in a 50-µl reaction volume containing 100 mM Tris-Cl, pH 7.4, 1 mM sodium deoxycholate, 0.5 mM dithiothreitol, 1 mM diolein, 1.6 mM [gamma -32P]ATP (5000 cpm/nmol), 5 mM magnesium chloride, and 50 µg of sample protein. The stock diolein solution (0.25 mM) (Avanti Polar Lipids, Alabaster, AL) was freshly prepared by sonicating on ice in 100 mM Tris-Cl, pH 7.4, containing 2.5 mM sodium deoxycholate and 1.25 mM dithiothreitol. An aliquot (20 µl) of this solution was added to 50 µg of the protein in 20 µl of 100 mM Tris-Cl. All additions were made at 4 °C. The reaction was initiated by adding 10 µl of a 5 × solution containing 8 mM [gamma -32P]ATP and 25 mM magnesium chloride. Samples were incubated at 30 °C for 10 min. Concentrated hydrochloric acid (50 µl) was added to stop the reaction. The lipids were extracted by adding 0.5 ml of water and 0.33 ml of butanol. After vortexing, the tubes were centrifuged for 3 min at 2000 rpm. The upper layer was transferred to a new tube and washed with an equal volume of butanol-saturated water. An aliquot of the upper layer (50 µl) was assayed on a scintillation counter.

Tissue Distribution Analysis

Male Syrian hamsters (100-150 g) were anesthetized with 90 mg/kg pentobarbital by injection into the lower abdominal cavity. For immunoblotting, the appropriate tissues were removed, rinsed in ice-cold homogenization buffer (20 mM Tris-Cl, pH 7.4, 5 mM EDTA, 2 mM dithiothreitol, 0.25 M sucrose), weighed, macerated, and placed in a 15-ml conical tube. Homogenization buffer (3 volumes/g tissue) containing 10 µg/ml leupeptin, 1 mM phenylmethylsulfonyl fluoride, and 10 µg/ml aprotinin was added before homogenizing in a Dounce homogenizer and sonicating 5 × 10 s. Protein values were determined by the method of Bradford (26). Samples (100 µg protein/lane) were separated on 7.5% SDS-polyacrylamide gels and blotted to NitroPlus.

Total RNA for ribonuclease protection analysis (RPA) was prepared from male Syrian hamster tissues. Tissues were placed in RNA extraction buffer (REB, 4 M guanidine isothiocyanate, 25 mM sodium citrate, 0.1 M beta -mercaptoethanol) at 10 ml/g tissue and homogenized for 30 s in a Brinkman Polytron. Total RNA was prepared by cesium chloride centrifugation using standard procedures. The total RNA was resuspended in ribonuclease-free water to a concentration of 2 µg/µl. The ribonuclease protection assay is described below.

Ribonuclease Protection Assay

An antisense RNA probe was prepared from a linearized pSK vector containing a 197-bp HincII/EcoRI fragment (nucleotides 3255-3451) of partial DGKepsilon cDNA with T3 RNA polymerase and [32P]dUTP according to the Ambion MAXIscript T7/T3 in vitro Transcription Kit protocol (Ambion, Inc., Austin, TX). Total RNA (20 µg/sample) was processed according to standard protocol or with the Ambion RPA II Kit. Samples were separated on a 5% sequencing gel that was dried and autoradiographed overnight. Hamster probes for a suitable standard (such as glyceraldehyde phosphate dehydrogenase) were not available for these studies. Therefore, results are normalized to total RNA per tissue sample. The relative distributions of DGKeta message were similar with two independent preparations of tissue RNAs.


RESULTS

Isolation of DGKeta Clones

In studies designed to study the hormonal regulation of PKCalpha in the steroid-responsive hamster smooth muscle DDT1 cell line, we determined that glucocorticoids such as triamcinolone acetonide (TAA) did not influence the level of immunoreactive 80-kDa PKCalpha . However, TAA treatment did increase the level of a 140-kDa protein (DGKeta ) that cross-reacted with the PKCalpha monoclonal antibody M6 (Fig. 1). In order to isolate the cDNA for this potential PKCalpha -related protein, the M6 antibody was used to immunoscreen a glucocorticoid-induced DDT1 Lambda Zap II expression library. Three overlapping clones (pSK4, pSK14, and pSK31) were isolated (Fig. 2). The pSK4 insert (2.6 kb) was selected for further study. Sequence analysis indicated that it contained a 1.3-kb open reading frame and 1.3 kb of 3' noncoding sequence. The bacterially expressed sequence was 47 kDa, which correlated with the predicted size of the translated cDNA, and was recognized by M6 (data not shown). However, the deduced amino acid sequence did not have significant homology to PKCalpha or to other protein kinases. Thus, the reason for M6 recognition of this expressed sequence is not due to primary sequence homology and, instead, may be due to some secondary structure common to both proteins.


Fig. 1. Glucocorticoid induction of DGKeta in DDT1 cells. DDT1 cells were treated with 10-8 M TAA for the indicated times. Total cell lysates were collected, and aliquots (100 µg of protein/lane) were separated by SDS-polyacrylamide gel electrophoresis and blotted to NitroPlus. The blot was probed with M6, a monoclonal antibody directed toward the catalytic domain of PKCalpha (21).
[View Larger Version of this Image (50K GIF file)]

To obtain additional 5' sequence, the library was rescreened with the pSK4 insert. Three larger overlapping clones (pSKA5, A20, and A21, 4.0 kb) were isolated. Since these still appeared to be only partial cDNAs, a 5' fragment of pSKA21 (pSKA21a) was used to screen a second DDT1 cDNA library from which clone pSKB24 (4.3 kb) was isolated. 5' RACE and inverse PCR were used to generate additional 5' sequence. The first 5' RACE product (pSK5'R1, 0.679 kb) extended 198 bp beyond the 5' end of pSKB24. The second 5' RACE product (pCRII5'R4, 0.452 kb) extended 322 bp further from the 5' end of 5'R1. The sequence obtained by inverse PCR (pCRII62/26) was identical to 5'R4, except that it was 8 base pairs longer. Fig. 2 indicates the spatial relationships of the various DGKeta clones. The composite sequence is 4.793 kb with an open reading frame of 3.462 kb and a predicted protein size of 127 kDa (Fig. 3). A putative start methionine with a consensus Kozak sequence was identified 25 base pairs after the beginning of the cDNA.


Fig. 3. Nucleotide and deduced amino acid sequences of the composite DGKeta cDNA. The nucleotide and deduced amino acid sequences for the composite DGKeta cDNA described in Fig. 2 are shown. The open reading frame consists of 3462 nucleotides and encodes 1154 amino acids. Single letter symbols for the amino acids are below the second nucleotide of each codon. The two conserved cysteine-rich domains are boxed. The two (putative) catalytic subdomains are doubly underlined. The N-terminal pleckstrin homology domain is singly underlined. *, termination codon.
[View Larger Version of this Image (105K GIF file)]

Verification That Clones Are DGKeta

To verify that the isolated sequences coded for the original 130-140-kDa protein recognized by the PKCalpha M6 antibody, polyclonal antibodies were prepared to three sequences from different regions of the composite partial DGKeta cDNA clone. Sequences used for antibody production are shown in Fig. 4A and include: 1) a synthetic 15-amino acid peptide corresponding to the C-terminal deduced amino acid sequence of pSK4 (AJ10), 2) a pSK4-glutathione S-transferase fusion protein (AJ12), and 3) a pSKA21b-histidine-tagged fusion protein (AJ21). All antisera were affinity purified against the cognate protein or peptide. Each of the antibodies recognized a TAA-inducible protein of 130-140 kDa on immunoblots of DDT1 cell lysates, thus confirming the relationship between the clones and DGKeta (Fig. 4B). Small differences in DGKeta recognition among the antibodies were also apparent. Whereas M6, AJ12, and AJ21 clearly recognized a doublet at 140 kDa, AJ10 (the C-terminal antipeptide antibody) recognized only one band. Careful comparison of adjacent lanes stained with M6 and AJ10 indicated that AJ10 recognized the lower (major) band of the doublet. The TAA-mediated increase in DGKeta protein was accompanied by a TAA-mediated increase in specific mRNA species detected either by Northern blot or ribonuclease protection analysis.2


Fig. 4. Characterization of antisera prepared to DGKeta sequences. A, location of expressed sequences to which antibodies were prepared. B, total lysates from control and TAA-treated DDT1 cells (100 µg of protein/lane) were electrophoresed and transferred to NitroPlus. Blots were probed with M6 (PKCalpha ), AJ12, AJ10, and AJ21 as indicated. C, recombinant baculovirus containing BvDGKeta -partial or BvDGK (full-length DGKeta ) were expressed in Sf9 cells. Cell lysates were prepared and blotted with affinity purified AJ21. An aliquot of hamster brain (HB) homogenate is included for comparison of relative mobilities of endogenous and recombinant DGKeta .
[View Larger Version of this Image (43K GIF file)]

Partial and full-length DGKeta constructs were expressed from baculovirus (BvDGKeta -p and BvDGKeta , respectively) in Sf9 cells. The expressed proteins were approximately 120 and 130 kDa, respectively (Fig. 4C). The molecular weights of endogenous hamster brain DGKeta and recombinant full-length DGKeta were nearly identical indicating that the putative start methionine indicated in Fig. 3 is at or very near the beginning of the open reading frame.

Sequence Analysis

The composite DGKeta sequence contains motifs found in other DGK family members including cysteine-rich motifs (CRMs) and the putative catalytic subdomains (Fig. 3). DGKeta is closely related (>57% homology) to DGKdelta (16) in each of these functional motifs. Unlike other DGK family members, DGKdelta and DGKeta do not contain identifiable EF hands but do contain an N-terminal pleckstrin homology domain (77% homology). A long intervening sequence between the putative catalytic subdomains is also unique to these DGKs; however, they differ substantially in this intervening sequence (<38% homology). The C terminus of DGKdelta has homology to the C terminus of the EPH receptor tyrosine kinases. This domain, which is not present in PKCeta , is thought to be a regulatory domain (16). Thus, despite their similarities in functional motifs, DGKdelta and DGKeta are distinct sequences that comprise a new subfamily of DGKs.

The spacing of the cysteines in the N terminus of the DGKeta sequence is characteristic of the general motif HX10-12CX2CX12-14CX2CX4HX2CX5-7C found in a variety of signaling molecules including PKCs, Raf kinases, and DGKs (2). Alignment of the PKCalpha , DGKeta , and c-Raf CRMs shows that the spacing of the cysteines and histidines is highly conserved; however, there is no significant homology outside of these residues (Fig. 5A). In contrast, alignment of the DGK CRMs demonstrates several potentially significant conserved residues (see Consensus in Fig. 5B). In particular, each of the DGK CRM I motifs (except DGKepsilon ) begins with the sequence GXHXW. An invariant P (or G) occurs two residues before the first cysteine which suggests the importance of secondary structure in this region. CRM 2 motifs also have a conserved W two residues from the beginning and an invariant W between the third and fourth cysteines. The end of CRM 2 is defined by a GX7PP sequence that is unique to the DGK family. As noted previously (17), spacing of residues in the CRMs of DGKepsilon is somewhat unique and could potentially be linked to the unique substrate specificity of this isozyme. Thus, the DGK CRMs share sequence similarities that are likely to distinguish their functions from CRMs found in other signaling molecules such as c-Raf, PKCs, unc 13, vav, and n-chimaerin.


Fig. 5. Alignment of the cysteine-rich motifs. A, alignment of the hamster DGKeta CRMs with the CRMs from rat PKCalpha , c-Raf, and MHCK (30, 37, 57). B, alignment of the first and second CRMs of different DGKs. *, conserved cysteines; -, gaps in the alignment; ., variant residues; down-arrow , conserved histidines.
[View Larger Version of this Image (65K GIF file)]

All DGK family members contain a second domain of conserved sequence homology that is likely to be important for DGK function and possibly for catalytic activity. In DGKdelta and -eta , this putative catalytic domain is separated into two subdomains (Fig. 6, A and B). These subdomains are also separated in Drosophila DGK1 (28). Subdomain sequences from each of the DGKs were >50% identical to the porcine DGKalpha corresponding sequences. Subdomain 1 contains a GXGXXGX12-14K motif (at G473-K492 in DGKalpha ) that is known to participate in ATP binding to protein kinases (10). Although the GXGXXG box is conserved among DGKs, the downstream K, which is essential for ATP binding in protein kinases, is not. Furthermore, recent studies demonstrated that mutations in this region do not affect DGKalpha activity (29). Therefore, this sequence does not appear to be the functional ATP-binding site for DGK phosphotransferase activity. Significant homology between subdomain 1 (but not subdomain 2) and MHCK (30) was also apparent. It should be noted that the GXGXXG motif found in this portion of the MHCK sequence (321-326) does not appear to be the functional ATP-binding domain (which has been mapped to residues 467-473). The homology of MHCK to DGK subdomain 1 may indicate a more general rather than a DGK-specific function.


Fig. 6. Alignment of the DGK putative catalytic subdomains. A, alignment of the first conserved subdomain from DGKs and MHCK. Residues were boxed if 4 out of 6 were identical. B, alignment of the second subdomain. -, gaps in the sequence; ., variant residues.
[View Larger Version of this Image (60K GIF file)]

DGKalpha , -beta , and -gamma contain two EF hand motifs that are known to participate in calcium binding and regulation of several proteins, including DGKalpha (19). The absence of EF hand motifs in DGKdelta and -eta indicate that they belong to a distinct subfamily of calcium-independent DGKs. These results indicate differences in calcium regulation of various DGK activities.

Tissue Distribution of DGKeta

The distribution of DGKeta in hamster tissues was characterized at the message level by ribonuclease protection analysis (RPA) and at the protein level by immunoblot analysis. To study the expression of DGKeta message, a 197-bp antisense RNA probe was made to the 3' end of the coding sequence (3.255-3.452 kb) and hybridized to total RNA samples from various tissues (Fig. 7). This probe corresponds to the final 66 amino acids of hamster DGKeta that were present in the antigen used to prepare antibody AJ12 used in the immunoblot analysis. Message was detected in every tissue examined with testes being the most abundant. Message levels in brain, lung, spleen, and prostate were also relatively abundant (prostate data not shown).


Fig. 7. Tissue distribution of DGKeta message. Ribonuclease assays were used to estimate DGKeta message levels in various hamster tissues. A, a 197-bp 32P-labeled riboprobe was generated from a HindIII/EcoRI fragment of clone 4 (pSK4). B, total RNA (20 µg) was isolated from hamster tissues and hybridized to the DGKepsilon -specific 197-bp riboprobe as described under ``Experimental Procedures.'' Data are representative of three independent experiments using two separate preparations of RNA from each tissue. Br, brain; Ht, heart; Ki, kidney; Li, liver; Lg, lung; Mu, muscle; Sp, spleen; Ts, testes.
[View Larger Version of this Image (65K GIF file)]

Immunoblots of total lysates from various hamster tissues were probed with antibody AJ12 (prepared to the final 433 amino acids of DGKeta ) (Fig. 8). These results also demonstrated that DGKeta is expressed to some degree in most tissues, although abundant message levels (i.e. in the testes) did not always correlate with abundant protein levels. This is potentially due to tissue-specific differences in protein stability or message processing. Of the tissues examined, highest levels were found in brain. Tissue distribution in rats was similar (data not shown). Molecular size heterogeneities among hamster tissues apparent in Fig. 8 were also apparent in immunoblots of rat tissues (data not shown).


Fig. 8. Tissue distribution of DGKeta protein. Hamster tissue homogenates were prepared, and proteins (100 µg of protein/lane) were separated by electrophoresis and blotted to NitroPlus. The blot was probed with DGKeta -specific antibody AJ12. Similar results were obtained in rat tissue distribution studies. Ad, adrenal; Br, brain; Ht, heart; Ki, kidney; Li, liver; Lg, lung; Mu, muscle; Sp, spleen; Ts, testes.
[View Larger Version of this Image (56K GIF file)]

DGK Activity

The substantial sequence and domain homologies clearly demonstrate that DGKeta is related to the DGK family of proteins. To determine if the DGKeta protein actually had DGK activity, a partial DGKeta cDNA construct beginning 308 bp from the putative start methionine (3.16-kb open reading frame, 4.112 kb total, see Fig. 3) was cloned into a pBlueBacHis transfer vector from which a recombinant baculovirus (BvDGKeta -p) was prepared for expression in insect cells. Lysates containing the partial DGKeta protein had approximately 3-4-fold more DGK activity compared with lysates from cells infected with recombinant PKCalpha baculovirus (Table I). Both the DGK activity and the DGKeta -immunoreactive protein (Fig. 9) were distributed approximately equally between the soluble and particulate fractions. The partial cDNA used in these expression studies does not contain the pH domain that may influence membrane association. However, we have also noted roughly equal partitioning of DGK between soluble and particulate fractions of cultured cells including fibroblasts and mammary and pituitary epithelial cells. These data show that expression of DGKeta is associated with increased DGK activity. The specific activity and fold increase are similar to that reported for extracts of COS cells expressing human DGKalpha or -delta (12, 16). It should be noted that DGK activity is dependent upon the type of detergent or lipid included in the assay and on the substrate used (13, 31, 32). We have not yet explored the optimal assay requirements for DGKeta activity. The catalytic activity of the partial DGKeta was extremely unstable as over 50% of the activity was lost after overnight storage at 4, -20, or at -70 °C in the presence of 10 or 20% glycerol.

Table I.

DGK activity in BvDGKeta -p-infected insect cells

Total lysates, soluble, and particulate fractions (50 µg protein/sample) were assayed in duplicate for DGK activity as described under ``Experimental Procedures.'' Results are from one experiment which was reproduced once with similar results.
Cell fraction PKCalpha DGKeta

Lysate 1.2  ± 0.08 3.8  ± 0.02a
Soluble 0.8  ± 0.2 4.8  ± 0.3
Particulate 0.8  ± 0.2 4.4  ± 0.3

a  Units are in nanomoles of 32P transferred per mg of protein/10 min.


Fig. 9. DGK-eta expression in Sf9 cells. Partial DGKeta (BVDGKeta -p) was expressed from recombinant baculovirus BvDGKeta -p in Sf9 cells. Aliquots of total lysates (Total), soluble (Sol) and particulate (Part) fractions (50 µg of protein/lane) from cells with (+) or without (-) BvDGKN-p infection were blotted and probed with AJ12.
[View Larger Version of this Image (62K GIF file)]


DISCUSSION

In this study we report the isolation of a unique cDNA (DGKeta ) with considerable homology to known DGKs in the CRMs and the two putative catalytic subdomains. Extracts from cells expressing recombinant partial DGKeta contained significantly more DGK activity than control cells or cells expressing recombinant PKCalpha , thus confirming that DGKeta protein has DGK activity. The positions of the functional domains in DGK family members are summarized in Fig. 10. In general, CRMs are located within the N-terminal half of the proteins, whereas the putative catalytic subdomains are found in the C-terminal regions. Type I DGKs (alpha , beta , gamma ) contain EF hands that are associated with the calcium-dependent activities of this type of DGK. Whereas wild type DGKalpha is a calcium-dependent enzyme, EF hand deletion mutants are calcium-independent (19). Type II DGKs (delta  and eta ) are not calcium-sensitive enzymes (16). The pleckstrin homology and/or the EPH C-terminal tail homology domains found in these DGKs are likely to play an important role in regulating their activities. DGKepsilon represents a third type of DGK that is distinguished according to its selective hydrolysis of diglycerides containing arachidonate (17). To date, structural motifs that are responsible for restricting the substrate specificity of DGKepsilon have not been identified. Finally, DGKzeta represents a fourth type of DGK that contains two identifiable motifs not found in other mammalian DGKs (18). DGKzeta contains four tandem ankyrin repeats that are also found in Drosophila DGK2 (14). Ankyrin repeats are known to be a general protein recognition motif (33) and could function similarly in DGKs. DGKzeta also contains a sequence homologous to the PKC phosphorylation site on the major PKC substrate myristoylated alanine-rich C-kinase substrate. In myristoylated alanine-rich C-kinase substrate, this sequence has been reported to be involved in PKC-regulated binding of phosphatidylserine, actin, and calmodulin (34, 35). The functions and regulation of this sequence in DGKzeta have not yet been studied. In summary, it is likely that the substantial sequence diversity among DGK family members contributes to unique functions and properties of individual DGKs.


Fig. 10. Conserved domains of cloned DGKs. Positions of conserved DGK domains (C1-C4) and functional motifs are illustrated.
[View Larger Version of this Image (23K GIF file)]

Spacing of the cysteines and histidines in the CRMs of DGKeta and other DGKs is very similar to the conserved 50-amino acid zinc-binding CRMs that have been identified in the PKC family, n-chimaerin and Raf (2, 36, 37). However, the composition of the intervening residues is unique for each CRM. Functions of individual CRMs have been described for some proteins. For example, phorbol ester/DG binding has been mapped to the CRMs in PKCs (except zeta ) (38, 39, 40). In contrast, the c-Raf CRM does not bind phorbol esters. To date, there is no direct evidence to suggest that the DGK CRMs bind DG or that they are required for catalytic activity. Previous work demonstrated that the porcine DGKalpha is not a high affinity phorbol ester receptor (41). On the other hand, phorbol esters and DG caused redistribution of cellular DGK activity from soluble to particulate fractions in some cells (42, 43, 44). Additional studies are needed to define the DG binding site in DGKs and to determine the function of the DGK CRMs.

The CRM of Raf has been shown to be important for Raf interactions with its upstream effector, Ras (45, 46, 47). Raf-Ras interactions were dependent on a 17-amino acid sequence N-terminal of and including the first eight residues of the single Raf CRM (47, 48, 49). The CRM of Raf also binds phospholipids, which has led to the suggestion that the Raf CRM may be a prototype for a general phospholipid-dependent protein recognition motif. PKC also participates in phospholipid-dependent interactions with other proteins (50, 51); however, the role of individual CRMs in these interactions has not yet been studied. It is not yet known if the DGK CRMs mediate DGK interactions with other proteins and/or phospholipids.

The actual site of the catalytic domain in DGK, a lipid kinase, has not yet been defined. Conservation of two homologous subdomains among all known DGKs provides strong evidence that these sequences are essential for DGK activity. These subdomains are contiguous in most mammalian DGKs and in Drosophila DGK2 but are separated in DGKdelta , -eta , and Drosophila DGK1. Surprisingly, a sequence homologous to subdomain 1 is also found in the protein kinase, myosin heavy chain kinase. Therefore, subdomain I is not unique to DGKs and may have a more general function. Although the protein kinase GXGXXGX12-14K ATP-binding motif was found in the C terminus of DGKalpha , recent studies demonstrate that this sequence is not necessary for DGK activity (29).

Previous work demonstrated that expression of DGKalpha , -beta , -gamma , -delta , and -epsilon are highly tissue-specific. For example, expression of porcine DGKalpha was limited to the thymus, lymphocytes, and specific regions of the porcine brain (52, 53). In contrast, DGKeta showed a much broader tissue distribution and was highly expressed in brain and testes. In particular, the abundance of message in brain, lung, and spleen distinguish PKCeta from the more narrowly expressed PKCdelta . The broad tissue and cellular distributions suggest that DGKeta may play a general role in cellular DG homeostasis.

In conclusion, we have identified a novel DGK that is significantly different from previously cloned DGKs based upon its sequence and tissue distribution. Furthermore, glucocorticoid induction of other DGKs has not been noted to date. It is clear that, similar to other signaling molecules such as PKC and phospholipase C, DGK is a heterogeneous family of proteins. There is evidence that individual DGKs may have unique properties and, consequently, unique functions. For example, a number of studies indicate that membrane-associated DGK activities and DGKepsilon (17) preferentially phosphorylate 1-stearoyl 2-arachidonyl DG, a molecular species that is primarily derived from phosphatidylinositol turnover (32, 54, 55, 56). It is probable that other DGKs also have specific roles in DG metabolism and, consequently, in the regulation of DG-dependent biochemical processes. Further studies will be necessary to determine how expression of individual DGKs influences agonist-stimulated and steady state DG levels. Such studies will begin to address the relative importance of different DG pools in DG-dependent cellular processes, such as activation of specific PKC isozymes.


FOOTNOTES

*   This work was supported by National Institutes of Health Grants CA53841 and CA65874 (to S. J.). The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked ``advertisement'' in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

The nucleotide sequence(s) reported in this paper has been submitted to the GenBankTM/EMBL Data Bank with accession number(s) U59429[GenBank].


Dagger    To whom correspondence should be addressed: W. Alton Jones Cell Science Center, 10 Old Barn Rd., Lake Placid, NY 12946. Tel.: 518-523-1260; Fax: 518-523-1849; E-mail: sjaken{at}northnet.org.
1   The abbreviations used are: DG, diacylglycerol; CRMs, cysteine-rich motifs; DGK, diacylglycerol kinase; PKC, protein kinase C; TAA, triamcinolone acetonide; PCR, polymerase chain reaction; RACE, rapid amplification of cDNA ends; kb, kilobase pair(s); bp, base pair(s); RPA, ribonuclease protection analysis; MHCK, myosin heavy chain kinase.
2   T. Klauck, manuscript in preparation.
*   This work was supported by National Institutes of Health Grants CA53841 and CA65874 (to S. J.). The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked ``advertisement'' in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

The nucleotide sequence(s) reported in this paper has been submitted to the GenBankTM/EMBL Data Bank with accession number(s) U59429[GenBank].


Dagger    To whom correspondence should be addressed: W. Alton Jones Cell Science Center, 10 Old Barn Rd., Lake Placid, NY 12946. Tel.: 518-523-1260; Fax: 518-523-1849; E-mail: jakenlab{at}ns.cencom.net,
1   The abbreviations used are: DG, diacylglycerol; CRMs, cysteine-rich motifs; DGK, diacylglycerol kinase; PKC, protein kinase C; TAA, triamcinolone acetonide; PCR, polymerase chain reaction; RACE, rapid amplification of cDNA ends; kb, kilobase pair(s); bp, base pair(s); RPA, ribonuclease protection analysis; MHCK, myosin heavy chain kinase.
2   T. Klauck, manuscript in preparation.

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