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Volume 271, Number 38,
Issue of September 20, 1996
pp. 23055-23060
©1996 by The American Society for Biochemistry and Molecular Biology, Inc.
Identification and Characterization of Two Alternative Splice
Variants of Human Interleukin-2*
(Received for publication, May 17, 1996)
Vjacheslav N.
Tsytsikov
§,
Vladimir V.
Yurovsky
,
Sergei P.
Atamas
,
William J.
Alms
and
Barbara
White
¶
From the Division of Rheumatology & Clinical
Immunology, Department of Medicine, University of Maryland at Baltimore
and the ¶ Medicine and Research Services, Veterans Affairs Medical
Center, Baltimore, Maryland 21201
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
FOOTNOTES
REFERENCES
ABSTRACT
Our previous work showed that alternative
splicing is used to make an inhibitory variant of human interleukin
(IL)-4. Because of homology between IL-4 and IL-2 proteins and
receptors, we tested whether alternative splicing is used to generate
similar inhibitory variants of human IL-2. Messenger RNA from
peripheral blood mononuclear cells was subjected to reverse
transcription-polymerase chain reaction using IL-2 exon 1- and exon
4-specific primers. Two amplification products, named IL-2 2 and
IL-2 3, were found in addition to the native IL-2 product. The
IL-2 2 cDNA sequence was identical to IL-2 cDNA throughout
the entire coding region, except exon 2 was omitted by alternative
splicing. In IL-2 3 cDNA, the third exon of IL-2 was omitted by
alternative splicing. Unlike IL-2, IL-2 2 and IL-2 3 did not
stimulate T cell proliferation. However, both inhibited IL-2
costimulation of T cell proliferation, and both inhibited cellular
binding of rhIL-2 to high affinity IL-2 receptors. Thus, IL-2 is the
second cytokine that uses alternative splicing to generate variants
that are competitive inhibitors.
INTRODUCTION
Interleukin-2 (IL-2)1 is a 15-18-kDa
glycosylated protein produced by activated T cells (1, 2). The IL-2
molecule has a four helix up-up-down-down configuration (3, 4, 5, 6),
making it a member of the IL-4-related cytokine family (7). Among its
many functions (reviewed in Ref. 8), IL-2 is an autocrine growth
factor for T cells and supports the development of cytotoxic T cells.
It stimulates B cell differentiation and immunoglobulin secretion.
Interleukin-2 enhances monocyte cytotoxicity, increases phagocytosis
and proliferation of macrophages, and stimulates natural killer cell
proliferation and cytolytic activity.
The magnitude of a cellular immune response is dependent in part upon
the amount of IL-2 secreted by T cells (9, 10). Cellular responses to
IL-2 depend upon expression of specific cell surface receptors.
Interleukin-2 receptors of different affinities are formed by
combinations of (p55), (p70), and C (p64) chains
(11, 12). The chain alone is the low affinity receptor, with
Kd of 10 8 (13, 14). The
/ C heterodimer is an intermediate affinity receptor,
with Kd of 10 9 (15).
Inclusion of the chain into an / / C
heterotrimer makes a high affinity receptor, with Kd
of 10 11 (16). The formation of high
affinity IL-2 receptors is regulated primarily through induction of the
chain, which turns over rapidly (17).
Increased IL-2 activity is thought to contribute to pathology in
certain infectious diseases (18), leukemias, lymphomas, and solid
tumors (19, 20, 21, 22, 23, 24), autoimmune diseases (25, 26), and graft rejection
(27, 28, 29). Because of therapeutic potential, efforts have been made to
inhibit IL-2 function. These efforts include creation of genetically
engineered mutant IL-2 molecules (30, 31, 32) and use of monoclonal
antibodies to block IL-2 binding to the chain of high affinity
receptor (29, 33).
In this study, we explore another potential mechanism of regulating
IL-2 function, one that occurs naturally in vivo. This study
is based on our previous observation that alternative splicing is used
to generate an inhibitory variant of human IL-4, called IL-4 2 (34,
35). In IL-4 2, exon 2 of IL-4 is omitted by alternative splicing.
This IL-4 variant has little IL-4 agonistic effects,but inhibits IL-4
costimulation of T cell proliferation, through competitive binding to
IL-4 receptors (34). Because of homology between IL-4 and IL-2 proteins
and receptors (7), we tested whether alternative splicing was also used
to create competitive inhibitors of IL-2. We report that alternative
splicing is used to create two variants of IL-2. One variant, called
IL-2 2, omits exon 2. The other variant, IL-2 3, omits exon 3. Both
inhibit IL-2 binding to high affinity IL-2 receptors.
EXPERIMENTAL PROCEDURES
Isolation and Activation of Peripheral Blood Mononuclear Cells
(PBMC)
Human PBMC were isolated by Ficoll-Hypaque density
centrifugation of heparinized blood samples from healthy adult
volunteers. To activate T cells within the PBMC, the PBMC were cultured
at 106 cells/ml in 1-ml cultures in complete tissue culture
medium containing a final concentration of 1% anti-CD3
monoclonal antibody (OKT3 hybridoma, American Type Culture Collection,
Rockville, MD). Complete tissue culture medium was RPMI 1640 containing
10% heat inactivated fetal bovine serum, 10 m HEPES, 2 m -glutamine, 1 m sodium
pyruvate, 0.1 m nonessential amino acids, 5 × 10 5 2-mercaptoethanol, and 5 mg/ml
gentamicin sulfate. The cultures were incubated for the desired time (6 h to 6 days) at 37 °C in a 5% CO2 humidified air
atmosphere. These activated PMBC were used for RNA isolation,
assays of IL-2 costimulation of T cell proliferation, and IL-2 receptor
binding studies.
Reverse Transcription-Polymerase Chain Reaction (RT-PCR) with
IL-2-Specific Primers
Acid guanidinium
thiocyanate/phenol/chloroform extraction (36) was used to isolate total
cellular RNA from PBMC activated with OKT3 monoclonal antibody for
6 h. One µg of RNA was denaturated for 5 min at 65 °C with 1 µl of random primers (Life Technologies, Inc.) in sterile
H2O in 11-µl total volume. Reverse transcription of RNA
into cDNA was done in a 20-µl reaction containing First Strand
Buffer (Life Technologies, Inc.), 10 m dithiothreitol, 0.5 m each dATP, dCTP, dGTP, dTTP, 200 units Moloney murine
leukemia virus reverse transcriptase (Life Technologies, Inc.), and 40 units of RNasin (Promega, Madison, WI), for 1 h at 37 °C.
Three µl of this cDNA mixture were subjected to PCR amplification
in a 25-µl mixture containing 0.83 units Taq polymerase,
PCR Buffer II, 5 m MgCl2 (all from
Perkin-Elmer), 0.4 m each dATP, dCTP, dGTP, dTTP, and 0.6 m each 3 and 5 PCR oligonucleotide primers. The PCR
mixture was amplified for 35 cycles, with denaturation at 94 °C for
1 min, primer annealing at 55 °C for 2 min, and primer extension at
72 °C for 2 min, with a final extension at 72 °C for 7 min. Two
sets of IL-2 primers were used for this PCR amplification. IL-2 primer
pair A was exon 1 forward primer 5 -ATG TAC AGG ATG CAA CTC CTG TCT
T-3 and exon 4 reverse primer 5 -GT CAG TGT TGA GAT GAT GCT TTG AC-3 .
IL-2 primer pair B was exon 1 forward primer 5 -CCT GCC ACA ATG TAC AGG
ATG-3 and exon 4 reverse primer 5 -TTA TCA AGT CAG TGT TGA GAT-3 . In
some experiments, the forward primer was 5 end-labeled with
[ -32P]ATP and 15 units T4 kinase (both from Amersham
Life Sciences, Inc.), following the manufacturer's protocol.
For cloning of IL-2, IL-2 2, and IL-2 3, nested PCR was done. The
PCR products were first generated with IL-2 primer pair B and then
subjected to gel electrophoresis through 1.2% low melting point
agarose (Life Technologies, Inc.). Ethidium bromide staining was used
to detect the cDNA band corresponding to IL-2 mRNA. The gel was
sliced into horizontal sections containing the IL-2 cDNA product
and three 0.5-mm wide slices beneath the IL-2 band. To extract
cDNA, the gel slices were treated with a GlasPac/GS QuicKit
(National Scientific Supply Co., Inc., San Rafael, CA), according to
the manufacturer's directions. The cDNAs from each slice were
resuspended in sterile H2O. Four µl of the resuspended
cDNA were used for a second PCR amplification with IL-2 primer pair
C. This IL-2 primer pair was exon 1 forward primer 5 -
GCA CCT ACT TCA AGT TCT ACA-3 and exon 4 reverse
primer 5 - TTA AGT CAG
TGT TGA GAT GAT GCT-3 . The underlined nucleotides encode a
EcoRI restriction site (forward primer) and a
NotI restriction site (reverse primer). The PCR mixture was
amplified for 35 cycles, with denaturation at 94 °C for 1 min,
primer annealing at 55 °C for 2 min, and primer extension at
72 °C for 3 min, with final extension at 72 °C for 7 min.
Oligonucleotide Hybridization
RT-PCR amplification products
generated with IL-2 primer pair A were size-separated by gel
electrophoresis in 2.5% agarose. The gels were soaked sequentially in
denaturation solution (1.5 NaCl, 0.5 NaOH)
and neutralization solution (1.5 NaCl, 1
Tris-HCl, pH 7.4) for 30 min each. The RT-PCR amplification products
were next transferred to nylon membranes by blotting overnight in
20 × standard saline citrate (SSC) buffer. The DNA samples were
cross-linked to the membrane by ultraviolet light irradiation.
Membranes were prehybridized in 6 × SSC, 10 × Denhardt's
solution, 0.1% SDS, and 50 µg/µl salmon sperm DNA for 1 h at
42 °C. The membrane was hybridized overnight with 0.2 µg of
32P-labeled oligonucleotide probe at 49 °C in 6 × SSC and 1% SDS. The oligonucleotide probe for the IL-2 exon 1-exon 3 junction was 5 -GGA ATT AAT GCC ACA GAA C-3 . This probe was 5
end-labeled with [ -32P]ATP, using a random primer
labeling system (Life Technologies, Inc.). The membrane was washed
three times in 6 × SSC and 1% SDS for 10 min at room
temperature, followed by a final wash at 49 °C for 20 min. The
membrane was subjected to autoradiography.
Cloning of IL-2, IL-2 2, and IL-2 3 cDNAs
IL-2,
IL-2 2, and IL-2 3 RT-PCR amplification products were generated by
nested PCR with IL-2 primer pairs B and C. These products were cloned
individually into the pCRTMII vector (Invitrogen Corp.),
according to the manufacturer's directions. The IL-2, IL-2 2, and
IL-2 3 inserts were separated from the pCRTMII vector by
digestion of the plasmid DNA with EcoRI and NotI
restriction enzymes (Life Technologies, Inc.). The digested DNA was
subjected to gel electrophoresis through 1.2% low melting point
agarose, and cDNAs were isolated from gel slices using GlasPac/GS
QuicKit. After ethanol precipitation, the IL-2, IL-2 2, and IL-2 3
cDNAs were ligated overnight with T4 DNA ligase into the pPIC9
plasmid (Invitrogen Corp., San Diego, CA), according to the
manufacturer's directions. Ligated pPIC9-IL-2, pPIC9-IL-2 2, and
pPIC9-IL-2 3 plasmids were purified by electrophoresis through low
melting point agarose, treatment with GlasPac/GS QuicKit, and ethanol
precipitation. The DNA sequences of the IL-2, IL-2 2, and IL-2 3
inserts in pPIC9 were determined using the Sequenase v.2.0 DNA
sequencing kit (Amersham Life Sciences, Inc.), according to the
manufacturer's directions.
Expression, Detection, and Partial Purification of Recombinant
Human (rh) IL-2, IL-2 2, and IL-2 3
The pPIC9 plasmids
containing IL-2, IL-2 2, and IL-2 3 were used individually to
transform the protease-deficient strain SMD1168 of Pichia
pastoris yeast (Invitrogen Corp.), according to the
manufacturer's directions. Several transformed Mut+ or
Muts transformed P. pastoris clones were
identified and selected. To confirm that IL-2, IL-2 2, or IL-2 3
cDNAs had integrated into the Pichia genome, DNA was
isolated from transformed clones using Easy-DNATM kit
(Invitrogen Corp.). Amplification by PCR of IL-2, IL-2 2, and
IL-2 3 DNAs was done with the 5 and 3 AOX1 primers included in the
Easy-DNATM kit, according to the manufacturer's
directions. Amplification of DNAs of the expected size confirmed
integration of the IL-2, IL-2 2, and IL-2 3 DNAs into the
Pichia genome.
Protein expression was induced by culturing the transformed yeast in
medium containing 1% methanol for 24 h at 30 °C, according to
the manufacturer's instructions. Protein expression by several
transformed Mut+ and Muts P. pastoris clones was compared to identify clones producing high
levels of IL-2, IL-2 2, or IL-2 3 protein. For SDS-polyacrylamide
gel electrophoresis, 50 µl of yeast supernatant were denaturated by
heating at 100 °C for 10 min, loaded onto a precast 10-20%
gradient gel (Bio-Rad), and subjected to electrophoresis in Laemmli
buffer. These gels were stained using a silver stain kit
(Sigma) or transblotted onto nitrocellulose membrane
(Amersham Life Sciences, Inc.) at 90 V and 0.25 A for 4 h.
Membranes were subjected to Western blotting with polyclonal rabbit
anti-human IL-2 antibody (Genzyme Corp., Cambridge, MA) at a 1:4000
dilution and then incubated with horseradish peroxidase-conjugated
polyclonal goat anti-rabbit antibody (Sigma) at a
1:10,000 dilution. Western blotting detection reagents from Amersham
Life Sciences were used for membrane blocking, washing, and
development.
Concentration and partial purification of rhIL-2, rhIL-2 2, and
rhIL-2 3 was done. For each protein, 1 liter of yeast supernatant was
concentrated to 50 ml by filtration through Ultrasette 3K filter
(Filtron Technology Corp., Northborough, MA). The concentrated IL-2,
IL-2 2, and IL-2 3 preparations were diluted with 1 liter of 0.15 phosphate-buffered saline, pH 7.4. These preparations
were again concentrated 20-fold through Ultrasette 3K filters to
exchange buffers, followed by filtration through 200 K OMEGA membranes
(Filtron Technology Corp.) to remove unwanted macromolecules. One liter
of supernatant from P. pastoris strain transformed with
pPIC9 plasmid containing cDNA for human serum albumin (Invitrogen
Corp.) was induced, concentrated, and partially purified in an
identical manner, for use as a negative control. The amounts of rhIL-2,
rhIL-2 2, and rhIL-2 3 in each preparation, relative to commercial
rhIL-2 (Life Technologies, Inc.), were estimated by quantitative
immunoblotting. Prior to use of the rhIL-2, rhIL-2 2, rhIL-2 3, and
recombinant human serum albumin in any cell proliferation assay,
preparations were dialyzed extensively against RPMI 1640 tissue culture
medium.
T Cell Costimulation Assay
PBMC were isolated and
stimulated with OKT3 monoclonal antibody, as described above. After 6 days, the mononuclear cells were washed twice and resuspended in
complete tissue culture medium without OKT3 monoclonal antibody. The
cells were cultured at 105 cells per 100-µl culture in
96-well microtiter plates (Falcon/Becton-Dickinson Labware, Oxnard, CA)
in complete tissue culture medium alone, or with rhIL-2, rhIL-2 2, or
rhIL-2 3 alone, or with rhIL-2 in combination with rhIL-2 2 or
rhIL-2 3. Cultures were incubated at 37 °C in a 5%
CO2 humidified air atmosphere. After 3 days, the cultures
were pulsed with 1 µCi of [3H]thymidine (DuPont
NEN), incubated overnight, and then harvested with a 1295 Cell
Harvester (LKB-Wallac, Turku, Finland). Tritiated thymidine
incorporation was measured with a 1205 Betaplate liquid scintillation
counter (LKB-Wallac). The mean ± standard deviation (S.D.) of cpm
of quadruplicate cultures was determined. Cell viability was
assessed by trypan blue dye exclusion. Cell numbers were determined
using a hemocytometer.
Binding Studies
PBMC were induced to express high affinity
IL-2 receptors by stimulation with OKT3 monoclonal antibody for 6 days
(37). The activated mononuclear cells were washed once with RPMI 1640, pH 3, at 4 °C to remove endogenously produced IL-2 that was bound to
IL-2 receptors on the cell surface (37). The cells were then washed and
resuspended at 106 cells/ml in 1-ml cultures in complete
tissue culture medium. To measure IL-2 binding to these cells, 10 p 125I-IL-2 (DuPont NEN) was added to cultures
alone or in combination with serial dilutions of unlabeled rhIL-2,
rhIL-2 2, or rhIL-2 3. The unlabeled rhIL-2, rhIL-2 2, and
rhIL-2 3 were always added 5 min before the 125I-IL-2.
The cells were incubated for 1 h at 4 °C with gentle shaking on
a platform shaker. The cells were collected by centrifugation, washed
twice in 5 µl of Hanks' balanced salt solution containing 2% bovine
serum albumin at 4 °C, and transferred to a clean tube. Bound
125I-IL-2 was measured using a 1272 CliniGamma automatic
counter (LKB-Wallac). Nonspecific binding, defined as residual cpm
of cells incubated with 125I-IL-2 in the presence of
200-fold molar excess of unlabeled rhIL-2, was subtracted from all data
points to determine the amount of specific binding. Data are presented
as the mean ± S.D. of the cpm of specifically bound
125I-IL-2 in quadruplicate cultures.
RESULTS
Alternative Splicing Is Observed for Human IL-2
mRNA
We had previously identified an inhibitory variant of
IL-4 in which exon 2 is omitted by alternative splicing (34, 35).
Because IL-4 and IL-2 are members of the same multigene family, we
examined IL-2 mRNA to determine whether alternative splicing was
also used to produce a variant that is missing exon 2. Total RNA was
isolated from human PBMC that were stimulated for 6 h with OKT3
monoclonal antibody. The RNA was subjected to RT-PCR amplification
using IL-2 PCR primer pair A. Two RT-PCR amplification products were
identified for IL-2 (Fig. 1A). The size of
the larger amplification product was estimated at 458 bp, which
corresponded to the size of native IL-2 cDNA (38, 39). The size of
the smaller amplification product was estimated at 398 bp, the
predicted size of an alternatively spliced variant of IL-2 lacking exon
2. This product was named IL-2 2.
Fig. 1.
Detection of two IL-2 mRNA species.
Total cellular RNA was extracted from human PBMC stimulated for 6 h with OKT3 monoclonal antibody. This RNA was subjected to RT-PCR using
IL-2 primer pair A. A, the 5 PCR primer was end-labeled
with 32P, and the RT-PCR amplification products were
subjected to gel electrophoresis in a 6% polyacrylamide gel. Two PCR
products were identified, a major band of 458 bp and a minor band of
398 bp. B, the same RT-PCR products were size-separated by
polyacrylamide gel electrophoresis, transferred to a nylon membrane by
blotting, and hybridized with an IL-2 exon 1-exon 3 junction probe.
Lane 1 contains molecular weight markers, and lane
2 contains RT-PCR products. The smaller 398-bp band (IL-2 2)
preferentially hybridizes with the probe.
[View Larger Version of this Image (27K GIF file)]
To further test for the presence of an alternative splice variant that
omitted exon 2, IL-2 RT-PCR products were size-separated by gel
electrophoresis, transferred to a nylon membrane, and hybridized with
an IL-2 exon 1-exon 3 junction probe (Fig. 1B). Two bands
were detected with this probe. The 458-bp product represents native
IL-2 cDNA, whereas the 398-bp band represents IL-2 2 cDNA.
The probe preferentially hybridized to IL-2 2 rather than complete
IL-2 cDNA (Fig. 1B).
Identification of IL-2 2 and IL-2 3 as Two Alternative Splice
Variants of IL-2
To further identify alternative splice variants
of IL-2, total cellular RNA was extracted from human PBMC stimulated
for 6 h with OKT3 monoclonal antibody. The RNA was subjected to
RT-PCR using IL-2 primer pair B. The amplification products were
subjected to gel electrophoresis in low melting point agarose. An
amplification product of the predicted size of IL-2 mRNA was
visualized using ethidium bromide staining. The agarose gel containing
the IL-2 amplification product and the gel underneath were sliced into
four 0.5-mm horizontal slices. DNA was extracted from each slice and
subjected to a second round of PCR with IL-2 primer pair C. The
amplification products were again size-separated by agarose gel
electrophoresis and visualized with ethidium bromide staining (Fig.
2). In addition to the expected IL-2 amplification
product of 416 bp (Fig. 2, lanes 3-6), an amplification
product of 356 bp was seen (Fig. 2, lanes 5 and
6), corresponding to the IL-2 2 PCR product identified in
Fig. 1. Unexpectedly, a third PCR product of 272 bp was seen (Fig. 2,
lane 4). This product, which had the expected size of an
alternative splice variant that was missing exon 3 (38), was named
IL-2 3.
Fig. 2.
Detection of three IL-2 mRNA
species. Total cellular RNA was extracted from human PBMC
stimulated for 6 h with OKT3 monoclonal antibody. This RNA was
subjected to RT-PCR using IL-2 primer pair B. The IL-2 RT-PCR
amplification product (slice 1) and the agarose gel
underneath this product (slices 2-4) were cut into 0.5-mm
horizontal splices. cDNA was extracted from each slice. A second
PCR was done with IL-2 primer pair C. Amplification products were
size-separated by agarose gel electrophoresis and detected with
ethidium bromide staining. Lane 1, molecular weight markers;
lane 2, negative control without cDNA; lane
3, gel slice 1; lane 4, gel slice 4; lane 5,
gel slice 3; and lane 6, gel slice 2. Three amplification
products were identified. A 416-bp product corresponded to IL-2. A
second product of 356 bp corresponded to IL-2 2 seen in lanes
5 and 6. A third amplification product of 272 bp seen
in lane 4 was named IL-2 3.
[View Larger Version of this Image (22K GIF file)]
Sequence Analysis of IL-2, IL-2 2, and IL-2 3
The IL-2,
IL-2 2, and IL-2 3 cDNAs were cloned into pPIC9 plasmid and
their DNA sequence determined. The IL-2 2 cDNA sequence consisted
of IL-2 exons 1, 3, and 4, with exon 1 spliced directly to exon 3 without frameshift or nucleotide errors (Fig. 3,
first panel). Sequence analysis of IL-2 3 cDNA showed
IL-2 exons 1, 2, and 4, with exon 2 spliced directly to exon 4 without
frameshift or nucleotide error (Fig. 3, third panel).
Sequence analysis of IL-2 cDNA isolated, cloned, and sequenced in
parallel with IL-2 2 and IL-2 3 cDNAs demonstrated the expected
presence of exons 1, 2, 3, and 4 (Fig. 3, 2nd and 4th
panels).
Fig. 3.
Sequence analysis of IL-2, IL-2 2, and
IL-2 3 cDNAs. IL-2, IL-2 2, and IL-2 3 RT-PCR
amplification products were cloned into the pPIC9 plasmid. Their DNA
sequences determined using the dideoxy-mediated chain termination
method. Autoradiograms of the sequencing gels at exon to exon splice
junctions are shown for IL-2, IL-2 2, and IL-2 3. Sequence analysis
of IL-2 2 cDNA demonstrated the presence of IL-2 exons 1, 3, and
4, with exon 1 spliced directly to exon 3, in frame (1st
panel). Sequence analysis of IL-2 3 cDNA demonstrated the
presence of IL-2 exons 1, 2, and 4, with exon 2 spliced directly to
exon 4, in frame (3rd panel). Sequence analysis of IL-2
cDNA isolated, cloned, and sequenced in parallel with IL-2 2 and
IL-2 3 cDNAs demonstrated the expected presence of exons 1, 2, 3, and 4, in frame (2nd and 4th panels).
[View Larger Version of this Image (49K GIF file)]
Expression and Characterization of rhIL-2, rhIL-2 2, rhIL-2 3
Proteins
Recombinant human IL-2, rhIL-2 2, and rhIL-2 3 in
pPIC9 plasmids were used individually to transform P. pastoris yeast strain SMD1168. Expression of each protein was
induced by culturing a transformed P. pastoris clone in 1%
methanol. Yeast supernatants were prepared as described above and
subjected to SDS-polyacrylamide gel electrophoresis through a 10-20%
gradient gel (Fig. 4A). Silver staining of
the gel showed single bands of proteins of the expected sizes, with
IL-2 approximately 15 kDa, IL-2 2 approximately 13 kDa, and IL-2 3
approximately 10 kDa (Fig. 4A, lanes 1, 2, and
3, respectively). Few other proteins were in these yeast
supernatants, because P. pastoris secretes few proteins of
its own (40). The yeast supernatants were also subjected to Western
immunoblotting analysis with polyclonal rabbit anti-human IL-2
antibody. The IL-2, IL-2 2, and IL-2 3 proteins were all recognized
by this antibody (Fig. 4B).
Fig. 4.
Silver stains and Western blots of IL-2,
IL-2 2, and IL-2 3 preparations. A, supernatants from
P. pastoris clones transformed with IL-2, IL-2 2, or
IL-2 3 were concentrated 10-fold and dialyzed. These supernatants
were subjected to SDS-polyacrylamide gel electrophoresis through a
10-20% gradient gel, which was silver-stained: lane 1,
IL-2; lane 2, IL-2 2; lane 3, IL-2 3.
B, parallel lanes were subjected to Western
immunoblotting with polyclonal rabbit anti-IL-2 antibody: lane
1, IL-2; lane 2, IL-2 2; lane 3,
IL-2 3.
[View Larger Version of this Image (37K GIF file)]
Ability of rhIL-2, rhIL-2 2, and rhIL-2 3 to Costimulate T Cell
Proliferation
IL-2 is a potent costimulator of T cell
proliferation (1, 2, 8). Experiments were designed to determine whether
IL-2 2 and IL-2 3 had similar functional effects. Commercial rhIL-2
made in Escherichia coli (Life Technologies, Inc.) and our
rhIL-2, rhIL-2 2, and rhIL-2 3 preparations were tested for ability
to costimulate proliferation of activated human PBMC. The PBMC were
stimulated for 6 days with 1% OKT3 monoclonal antibody to activate T
cells and then washed twice. These cells were cultured for 3 days in
complete tissue culture medium alone, with commercial rhIL-2, or with
rhIL-2, rhIL-2 2, or rhIL-2 3. [3H]Thymidine was
added during the last 12 h of culture. Commercial rhIL-2 and our
rhIL-2 stimulated similar degrees of proliferation (Fig.
5). In contrast, rhIL-2 2 and rhIL-2 3 did not
stimulate proliferation at similar concentrations (Fig. 5) or even at
higher concentrations up to 500 p (data not shown).
Fig. 5.
Costimulation of proliferation of activated T
cells by rhIL-2, rhIL-2 2, and rhIL-2 3. T cells within PBMC
were activated for 6 days with OKT3 monoclonal antibody. The cells were
washed and cultured at 105 cells per 100 µl of culture
for 72 h in tissue culture medium alone or with titrated amounts
of commercial rhIL-2 made in E. coli, or rhIL-2, rhIL-2 2,
and rhIL-2 3 made in P. pastoris.
[3H]Thymidine was added at 1 µCi/well during the last
12 h of culture. The mean cpm ± S.D. of quadruplicate
cultures is shown: , rhIL-2 2; , rhIL-2 3; , rhIL-2; ,
commercial rhIL-2. The background cpm of PBMC cultured alone were
504 ± 167.
[View Larger Version of this Image (17K GIF file)]
Ability of rhIL-2 2 and rhIL-2 3 to Inhibit IL-2 Costimulation
of T Cell Proliferation
Next, studies were done to test whether
rhIL-2 2 or rhIL-2 3 could inhibit IL-2 costimulation of T cell
proliferation. Again, PBMC were stimulated for 6 days with 1% OKT3
monoclonal antibody to activate T cells and washed twice. The cells
were cultured in complete tissue culture medium alone, with 1 or 5 ng/ml (0.06 or 0.3 p) rhIL-2 alone, or in combination with
titrated doses of rhIL-2 2 or rhIL-2 3. These doses of rhIL-2 were
chosen based upon preliminary experiments that showed they stimulated
proliferation within the linear portion of the dose-response curve.
Recombinant human serum albumin prepared in an identical manner was
used as a negative control. [3H]Thymidine incorporation
was measured after 72 h of culture. As expected, rhIL-2
costimulated T cell proliferation. However, in a
dose-dependent manner, both rhIL-2 2 and rhIL-2 3
inhibited the ability of IL-2 to cause T cell proliferation (Fig.
6). Human serum albumin prepared in an identical manner
had no effect (Fig. 6). Similar inhibitory effects of rhIL-2 2 and
rhIL-2 3 were seen in four of four independent experiments.
Fig. 6.
Inhibition of IL-2-stimulated T cell
proliferation by rhIL-2 2 and rhIL-2 3. T cells within PBMC
were activated for 6 days with OKT3 monoclonal antibody. The cells were
washed and incubated at 106 cells per µl with rhIL-2, at
5 ng/ml (A) or 1 ng/ml (B) alone or with titrated
amounts of rhIL-2 2, rhIL-2 3, or recombinant human serum albumin.
[3H]Thymidine incorporation during the last 12 h of
culture of a 3-day culture was determined. The mean cpm ± S.D. of
quadruplicate determinations are shown: , rhIL-2 2; ,
rhIL-2 3; , recombinant human serum albumin. The background cpm of
PBMC cultured alone were 370 ± 104 (A) and 501 ± 19 (B).
[View Larger Version of this Image (16K GIF file)]
The observed inhibition of IL-2 costimulation could have been caused by
nonspecific toxic effects of the rhIL-2 2 and rhIL-2 3
preparations, despite dialysis against and dilution in RPMI 1640 tissue
culture medium before use. This seemed less likely because identical
amounts of P. pastoris supernatant containing human serum
albumin did not inhibit IL-2-mediated costimulation (Fig. 6). Lack of
toxicity of rhIL-2 2 and rhIL-2 3 was confirmed in additional
experiments in which 106 PBMC were incubated in complete
tissue culture medium with titrated doses of rhIL-2 2 and rhIL-2 3
(up to 500 p), in quadruplicate 1-ml cultures. Cell
viability and numbers were determined after 3 days. There was no
increase in percent dead cells nor any reduction in total numbers of
cells in cultures containing rhIL-2 2 or rhIL-2 3, compared with
PBMC incubated with media alone (data not shown). Thus, the inhibitory
effects of rhIL-4 2 and IL-2 3 do not appear to be from nonspecific
toxicity.
Inhibition of Binding of 125I-IL-2 to High Affinity
IL-2 Receptors by IL-2 2 and IL-2 3
Experiments were done to
determine if IL-2 2 and IL-2 3 could inhibit the binding of
radiolabeled rhIL-2 to cells, indicating these proteins bind similar
receptors. Human PBMC were activated by incubation for 6 days with 1%
OKT3 monoclonal antibody, to induce high affinity IL-2 receptors. Then
the PBMC were washed with RPMI 1640, pH 3, at 4 °C to remove
endogenously produced IL-2 that bound to IL-2 receptors during the
culture period (37). The activated cells were washed and incubated with
medium alone, with 10 p 125I-IL-2 alone, or
with 10 p 125I-IL-2 plus rhIL-2 2 or
rhIL-2 3 in concentrations from 10 p to 10 n. Residual nonspecific binding of 125I-IL-2
in the presence of 2 n unlabeled IL-2 was subtracted from
data points to determine specific binding. Titrated doses of rhIL-2 2
and rhIL-2 3 inhibited specific binding of
125I-rhIL-4 2, in a dose-dependent manner
(Fig. 7). In contrast, the human serum albumin
preparation had no effect.
Fig. 7.
Inhibition of binding of rhIL-2 to high
affinity IL-2R by rhIL-2 2 and rhIL-2 3. T cells within PBMC
were activated for 6 days with OKT3 monoclonal antibody. The cells were
washed with RPMI 1640, pH 3, at 4 °C and resuspended in tissue
culture medium at 106 cells/µl. The cells were incubated
with medium alone, 10 p 125I-IL-2 alone, or
with 10 p 125I-IL-2 in combination with
titrated doses of rhIL-2 2 ( ), rhIL-2 3 ( ), or recombinant
human serum albumin ( ). Specific binding of 125I-IL-2
was determined. Data are presented as mean cpm ± S.D. of
quadruplicate cultures.
[View Larger Version of this Image (17K GIF file)]
DISCUSSION
This report shows that alternative splicing is used to produce
splice variants of human IL-2, called IL-2 2 and IL-2 3. The
nucleotide sequence of IL-2 2 is otherwise identical to IL-2 (38, 39)
throughout the entire protein encoding region, with IL-2 exons 1, 3, and 4 spliced in an open reading frame. In parallel, the nucleotide
sequence of IL-2 3 is identical to IL-2 throughout the entire protein
encoding region, with IL-2 exons 1, 2, and 4 spliced in an open reading
frame. We report that PBMC activated with anti-CD3 monoclonal antibody
produce RNA for IL-2, IL-2 2, and IL-2 3. Unlike rhIL-2, neither
rhIL-2 2 nor rhIL-2 3 are effective costimulators of T cell
proliferation. In contrast, both show dose-dependent
inhibition of IL-2 costimulation of T cell proliferation. Both inhibit
binding of radiolabeled rhIL-2 to cells expressing high affinity IL-2
receptors. These results indicate that IL-2 2 and IL-2 3 are
competitive inhibitors of IL-2.
This report adds to our previous finding that alternative splicing is
used to generate an inhibitory variant of human IL-4, called IL-4 2
(34, 35). Thus, both IL-4 and IL-2, which share protein structure,
receptor structure, and even the C chain of their high
affinity receptors (7, 41, 42), use the same mechanism to create
natural competitive inhibitors. Our previous experiments suggest that
other members of the IL-4-related cytokine family, human IL-3, IL-5,
IL-13, and granulocyte macrophage-colony stimulating factor, do not use
alternative splicing to delete exon 2 (35). At this time, it is
possible to distinguish between complete IL-2, IL-2 2, and IL-2 3
RNAs with RT-PCR techniques that use primer pairs specific for exon 1 and exon 4, combined with size separation of the amplified products.
Discrimination among the three proteins may require antibodies specific
for epitopes that include exon 2 (complete IL-2), the exon 1-exon 3 junction (IL-2 2), and the exon 2-exon 4 junction (IL-2 3).
Information about the intron-exon structure of the IL-2 gene (38), the
structure of the IL-2 molecule (3, 4, 5, 6), and areas of interaction with
the , , and C receptor chains (43, 44, 45, 46, 47, 48, 49, 50, 51) is
invaluable when trying to predict how IL-2 2 and IL-2 3 might
interact with IL-2 receptors. The protein structure of IL-2 is four
left-handed helices in an up-up-down-down configuration (4, 5, 6).
Exon 1 of IL-2 encodes Ala1-Asn29, which forms
a short strand plus helix A. Exon 2 encodes
Asn30-Lys49, which forms a connecting strand
with short helix and -pleated sheet. Exon 3 encodes
Ala50-Lys97, which forms helix B + B , a short
connecting strand, and helix C. Helix B + B is flexible because of
proline at position 65 (3). Exon 4 encodes
Gly98-Thy133. This makes a short connecting
strand, a -pleated sheet, and helix D. Voss et al. (51)
have articulated the following model of IL-2 interactions with the high
affinity IL-2 receptor. Helix A contacts the chain of the IL-2
receptor. The minor helix and connecting strand encoded by exon 2 contact the chain and then loop around the C chain
of the IL-2 receptor. Helix B + B , the short connecting strand, and
helix C encoded by exon 3 do not contact the IL-2 receptor directly but
lie on top of the contact residues. Helix D lies in a groove between
the and C chains and is important in engagement of
the C chain.
Given the above information, at a minimum, omission of exon 2 in
IL-2 2 should alter binding to the chain of the IL-2 receptor.
Engagement of the chain of the high affinity receptor is needed for
both high affinity binding and optimal cell triggering (49, 52). Thus,
IL-2 2 may serve as a competitive inhibitor of IL-2 binding to high
affinity receptors by engaging the and/or C chains
but not the chain.
Exon 3 encodes the face of the IL-2 molecule away from the putative
contact residues (51). Point mutations in human exon 3 at
Glu62 lose ability to bind the chain (50). Thus, loss
of exon 3 may allow binding to the IL-2 receptor but may interfere with
binding to the chain. Exon 3 also encodes Cys58. A
disulfide bond between Cys58 and Cys105
stabilizes the IL-2 structure and is necessary for IL-2 activity but is
unnecessary for IL-2 binding to the receptor (43). Loss of
Cys58 may lead to mismatched disulfide binding (43).
The prediction that IL-2 2 and IL-2 3 will serve as competitive
inhibitors because of failure to engage the chain of the high
affinity IL-2 receptor is compatible with the data presented in this
report. Neither rhIL-2 2 nor rhIL-2 3 had significant agonist
activity in a T cell costimulation assay, which involves the high
affinity IL-2 receptor (16) and requires engagement of the chain
for optimal activity (49, 52). Both alternative splice variants
inhibited IL-2 costimulation of T cell proliferation and IL-2 binding
to high affinity receptors. Interaction of IL-2 with the high affinity
IL-2 receptor on PBMC or peripheral blood lymphocytes is also necessary
for maximal secretion of IL-1 , tumor necrosis factor- , tumor
necrosis factor- , and interferon- (30). Therefore, if both
IL-2 2 and IL-2 3 fail to engage the chain, then they also
would be expected to have little agonist effect and serve as
competitive inhibitors of IL-2 stimulation of cytokine secretion from
activated PBMC. Of importance, failure of IL-2 2 and IL-2 3
to engage the chain should not reduce the ability of the chain
to form the high affinity receptor. The chain functions of
engagement of IL-2 and formation of high affinity receptors are
distinct (53, 54).
Engagement of the high affinity IL-2 receptor is not always required
for every biologic effect of IL-2 (31, 32, 55, 56, 57). In humans, the
intermediate affinity / C IL-2 receptor is responsible
for induction of natural killer and lymphokine-activated killer cells'
proliferation and cytolytic activity (31, 32). Similarly, binding of
IL-2 to intermediate affinity receptors is sufficient to stimulate
proliferation of / T cells (56). Engagement of the intermediate
affinity IL-2 receptor is also sufficient to stimulate lymphocyte
locomotion and expression of CD69, the IL-2 receptor chain, and
HLA-DR (57). These examples lead us to speculate that a potential role
for these IL-2 splice variants in vivo is to
selectively inhibit cellular responses triggered through the high
affinity IL-2 receptor, while leaving intact immunity provided by
activated natural killer cells and / T cells.
Because IL-2 2 and IL-2 3 are naturally occurring IL-2 antagonists,
they may be useful therapeutically to inhibit cell growth or functions
stimulated through high affinity IL-2 receptors or to target IL-2
receptor-expressing cells. They would provide alternatives to use of
synthetic IL-2 mutants and anti-IL-2 receptor antibodies. Because
IL-2 2 or IL-2 3 are naturally occurring, immune responses against
them should not develop. This would be an advantage over the use of
synthetic mutants or nonhumanized anti-IL-2 receptor antibodies. When
conjugated to toxins, they could be used as a nonactivating means of
directing toxins to cells expressing high affinity IL-2 receptors.
Induction of cytokine secretion by IL-2, which requires engagement of
the chain of the high affinity receptor (30), mediates the toxicity
associated with IL-2-based immunotherapies. Thus, these naturally
occurring mutants might have the added advantage of less toxicity.
FOOTNOTES
*
This work was supported by a grant from the Maryland
Chapter, Arthritis Foundation (to B. W.) and by a fellowship from the
Arthritis Foundation (to V. Y.). The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
``advertisement'' in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
§
To whom correspondence should be addressed: University of Maryland,
MSTF Room 8-23, 10 South Pine St., Baltimore, MD 21201. Tel.:
410-706-6474; Fax: 410-706-0231.
1
The abbreviations used are: IL, interleukin; bp,
base pairs; PBMC, peripheral blood mononuclear cells; PCR, polymerase
chain reaction; rh, recombinant human; RT, reverse transcription.
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Y. Yang, L. Li, G. W. Wong, S. A. Krilis, M. S. Madhusudhan, A. Sali, and R. L. Stevens
RasGRP4, a New Mast Cell-restricted Ras Guanine Nucleotide-releasing Protein with Calcium- and Diacylglycerol-binding Motifs. IDENTIFICATION OF DEFECTIVE VARIANTS OF THIS SIGNALING PROTEIN IN ASTHMA, MASTOCYTOSIS, AND MAST CELL LEUKEMIA PATIENTS AND DEMONSTRATION OF THE IMPORTANCE OF RasGRP4 IN MAST CELL DEVELOPMENT AND FUNCTION
J. Biol. Chem.,
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[Abstract]
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M. P. Bihl, K. Heinimann, J. J. Rudiger, O. Eickelberg, A. P. Perruchoud, M. Tamm, and M. Roth
Identification of a Novel IL-6 Isoform Binding to the Endogenous IL-6 Receptor
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48 - 56.
[Abstract]
[Full Text]
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E M Glare, M Divjak, M J Bailey, and E H Walters
The usefulness of competitive PCR: airway gene expression of IL-5, IL-4, IL-4{delta}2, IL-2, and IFN{gamma} in asthma
Thorax,
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56(7):
541 - 548.
[Abstract]
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S. P. Atamas and B. White
Interleukin 4 in Systemic Sclerosis: Not Just an Increase
Clin. Vaccine Immunol.,
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658 - 659.
[Full Text]
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S. Mummidi, G. Catano, L. Lam, A. Hoefle, V. Telles, K. Begum, F. Jimenez, S. S. Ahuja, and S. K. Ahuja
Extensive Repertoire of Membrane-bound and Soluble Dendritic Cell-specific ICAM-3-grabbing Nonintegrin 1 (DC-SIGN1) and DC-SIGN2 Isoforms. INTER-INDIVIDUAL VARIATION IN EXPRESSION OF DC-SIGN TRANSCRIPTS
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[Abstract]
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Copyright © 1996 by the American Society for Biochemistry and Molecular Biology.
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