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(Received for publication, October 3, 1996, and in revised form, January 31, 1997)
From the Research Division, Joslin Diabetes Center, and Department
of Medicine, Harvard Medical School,
Boston, Massachusetts 02215
Members of the Rad family of GTPases (including
Rad, Gem, and Kir) possess several unique features of unknown function
in comparison to other Ras-like proteins, with major N-terminal and C-terminal extensions, a lack of typical prenylation motifs, and several non-conservative changes in the sequence of the GTP binding domain. Here we show that Rad and Gem bind to calmodulin
(CaM)-Sepharose in vitro in a calcium-dependent
manner and that Rad can be co-immunoprecipitated with CaM in C2C12
cells. The interaction is influenced by the guanine nucleotide binding
state of Rad with the GDP-bound form exhibiting 5-fold better binding
to CaM than the GTP-bound protein. In addition, the dominant negative
mutant of Rad (S105N) which binds GDP, but not GTP, exhibits enhanced
binding to CaM in vivo when expressed in C2C12 cells.
Peptide competition studies and expression of deletion mutants of Rad
localize the binding site for CaM to residues 278-297 at the C
terminus of Rad. This domain contains a motif characteristic of a
calmodulin-binding region, consisting of numerous basic and hydrophobic
residues. In addition, we have identified a second potential regulatory
domain in the extended N terminus of Rad which, when removed, decreases
Rad protein expression but increases the binding of Rad to CaM. The ability of Rad mutants to bind CaM correlates with their localization in cytoskeletal fractions of C2C12 cells. Immunoprecipitates of calmodulin-dependent protein kinase II, the cellular
effector of Ca2+-calmodulin, also contain Rad, and in
vitro both Rad and Gem can serve as substrates for this kinase.
Thus, the Rad family of GTP-binding proteins possess unique
characteristics of binding CaM and calmodulin-dependent protein kinase II, suggesting a role for Rad-like GTPases in calcium activation of serine/threonine kinase cascades.
Rad is the prototypic member of a new class of Ras-like
GTP-binding proteins that includes Gem and Kir (1-3). In humans, Rad
is most highly expressed in the heart, lung, and skeletal muscle and
expression is increased in the skeletal muscle of some type II diabetic
humans (1). Rad exhibits a unique magnesium dependence for guanine
nucleotide binding and is regulated by a Rad-specific GTPase-activating
protein (GAP)1 (4). In cultured muscle and
fat cells, Rad overexpression attenuates insulin-stimulated glucose
uptake without altering expression or insulin-stimulated translocation
of the Glut4 glucose transporter (5). By expression library screening,
Rad has been shown to interact with skeletal muscle rad and kir/gem encode GTP-binding
proteins with several structural features that are distinct from other
GTPases (1-3). The N terminus of Rad is extended by 88 amino acids,
and Kir/Gem is extended by 72 amino acids in comparison to Ras, and the
C terminus of each is extended by 31 amino acids. Although Rad and Kir/Gem share 100% identity in the final 11 amino acids, they lack a
CAAX-like prenylation site present in other Ras-like
molecules (8, 9). Rad and Kir/Gem differ from each other and from other
Ras-like proteins in the putative effector (G2) domain, suggesting that
they interact with distinct GAPs or effector molecules. They also
contain residues in the G3 consensus sequence for guanine nucleotide
binding which are divergent from Ras (1-3).
Members of the Ras family of GTP-binding proteins participate in a
number of cellular functions including proliferation (10), vesicular
transport (11, 12), and cytoskeletal arrangement (13, 14). Rac and
cdc42 have been shown to interact with phosphatidylinositol 3-kinase
and to participate in signaling leading to activation of the Jun
kinases (15, 16). While the exact function of Rad and Kir/Gem is
unknown, it has recently been reported in abstract that peptides based
on the C terminus of Rad and Kir/Gem can bind to calmodulin (CaM)
in vitro (17). In this study, we show that the full-length
Rad protein binds CaM in vitro and in vivo in a
Ca2+-dependent manner and that the C-terminal
residues 278-297 of human Rad are critical for this interaction. The
binding of Rad and CaM is influenced by the guanine nucleotide bound
state of Rad. We also demonstrate that Rad is present in complex with
the cellular target of CaM, calmodulin-dependent protein
kinase II (CaMKII), which can phosphorylate both Rad and Gem in
vitro. These findings suggest that the Rad family of Ras-like
proteins may participate in Ca2+-triggered signaling events
involving CaM and the CaMKII serine/threonine kinase cascade.
C2C12 murine myocytes transfected with puromycin resistance
vector only (Puro), or expressing full-length human wild-type (WT)
rad cDNA, the potential dominant negative mutant, S105N, or the putative activated mutant, P61V/Q109H (PVQH), were produced by
transfection using the pBabe-Puro retroviral vector (6). C-terminal
deletion mutants were constructed by polymerase chain reaction using WT
Rad cDNA as a template. 5 C2C12 murine
myocytes were maintained in Dulbecco's modified Eagle's medium
containing 10% fetal bovine serum in a 5% CO2 environment. Two days post-confluence, cells were fed with Dulbecco's modified Eagle's medium containing 1% calf serum and allowed to differentiate into mature myotubes for 5-7 days. Cells on a 100-mm dish were washed twice with ice-cold phosphate-buffered saline and
scraped into 500 µl of lysis buffer containing 1% Triton X-100, 25 mM Tris, pH 7.4, 150 mM NaCl, 1 mM
DTT, 1 mM MgCl2, 1 mM
phenylmethylsulfonyl fluoride, 10 µg/ml aprotinin, and 10 µg/ml
leupeptin. Cells were rotated at 4 °C for 1 h prior to
centrifugation at 10,000 × g for 10 min to remove
insoluble material. Protein concentrations were determined using the
BCA protein assay (Pierce).
The pGEX-2T
vector encoding full-length Gem was a generous gift from K. Kelly,
National Institutes of Health. Purified recombinant GST-Rad and GST-Gem
were prepared as described previously for Rad (4). Peptides
corresponding to the C-terminal residues 279-308 of human Rad
(KRFLGRIVARNSRKMAFRAKSKSCHDLSVL) and to the Rad effector domain
residues 115-127 (DGPEAEAAGHTYD) were generated by the peptide core of
the Joslin Diabetes Center DERC.
For binding to CaM-Sepharose, GST-Sepharose, or
Sepharose 4B, lysates (0.5 or 1.0 mg) or purified Gem (0.5 µg) were
incubated in lysis buffer with 10-20 µl of a 50% slurry of
CaM-Sepharose (Pharmacia Biotech Inc., final concentration 3-6
µM), GST-Sepharose, or Sepharose 4B (Pharmacia) which was
previously washed three times in lysis buffer. When noted, incubations
contained 1 mM CaCl2 or 2 mM EGTA.
Following rotation for 4 h at 4 °C, beads were washed three
times in lysis buffer with or without CaCl2 or EGTA. For
immunoprecipitations, extracts were incubated with 5 µg of anti-CaM
monoclonal antibody (Upstate Biotechnology, Inc., UBI), 5 µg of
anti-CaMKII polyclonal antibody (UBI), or anti-Rad polyclonal antiserum
JD68 (6) for 4 h at 4 °C. Immune complexes were precipitated
using protein G-Sepharose (Pharmacia) for CaM or protein A-Sepharose
(Pharmacia) for CaMKII and Rad. For Western immunoblotting 1:1000
dilutions of anti-CaM and anti-Rad antibodies were used. Anti-Gem
monoclonal antibody, 2D10, was a gift from K. Kelly and was used at a
1:500 dilution. Blots were subsequently incubated with horseradish
peroxidase-conjugated goat anti-mouse antibody (Jackson ImmunoResearch)
for CaM and Gem or 125I-labeled protein A (DuPont NEN) for
Rad. Purified CaM was purchased from Boehringer Mannheim.
1 µg of GST-Rad bound to
glutathione-Sepharose beads was incubated with or without 5 µg of
purified CaM at 4 °C for 1 h. Beads were washed four times in
ice-cold loading buffer (50 mM Tris-HCl, pH 7.4, 1 mM MgCl2, 1 mM DTT, and 1 mg/ml
bovine serum albumin) prior to loading with [ GTP and GDP binding to Rad was
determined using a nitrocellulose filtration assay as described (4). 20 pmol/sample of GST-Rad was incubated in exchange buffer (50 mM Tris-HCl, pH 7.4, 1 mM DTT, 1 mM
MgCl2, and 1 mg/ml bovine serum albumin) with or without 100 pmol/sample of CaM (Boehringer Mannheim) and 3 µCi/sample [3H]GDP or [3H]GTP (specific activity
25-50 Ci/mmol; DuPont NEN) at room temperature. At each time point
40-µl aliquots were filtered in duplicate through BA 85 nitrocellulose (Schleicher & Schuell) followed by washing with 10 ml of
ice-cold filtration buffer (50 mM Tris-HCl, pH 7.4, 0.1 mM DTT, and 1 mM MgCl2). The
radioactivity remaining on the filters was determined by scintillation
counting.
For phosphorylation by CaMKII,
approximately 0.5 µg of Rad and Gem recombinant proteins, purified by
thrombin cleavage from GST-fusion proteins or 0.5 µg of MBP (Sigma),
were incubated in a total volume of 30 µl in kinase buffer (50 mM HEPES, pH 7.5, 1 mM DTT, 2 mM
CaCl2, 2 mM CaM) in the presence of 1 unit of
CaMKII (Sigma) and 10 µCi of [ C2C12 myotubes expressing WT or
mutant Rad were subjected to subcellular fractionation based on the
method of Torti et al. (18). Cells from two 150-mm dishes
were harvested by scraping into ice-cold buffer (20 mM
HEPES, pH 7.4, 255 mM sucrose, 1 mM EDTA, 10 µg/ml leupeptin, 10 µg/ml aprotinin, and 1 mM
phenylmethylsulfonyl fluoride). Cells were homogenized with a Teflon
pestle in a Wheaton glass homogenizer. The post-nuclear supernatants
were centrifuged at 200,000 × g for 60 min. The
supernatant containing cytosolic proteins was collected. The total
membrane pellet was rehomogenized in buffer containing 10 mM HEPES, 137 mM NaCl, 2.9 mM KCl,
12 mM NaHCO3, pH 7.4, and 1% Triton X-100 and
incubated for 30 min at 4 °C. The Triton X-100 insoluble
cytoskeleton was collected by centrifugation for 6 min at 12,000 × g. The supernatant was centrifuged for 60 min at
200,000 × g to obtain the membrane skeleton pellet and
supernatant containing total soluble membranes. 50 µg of each
fraction was analyzed by Western immunoblotting with anti-Rad
antibodies.
To determine
whether Rad binds CaM, lysates from C2C12 myoblasts overexpressing Rad
were incubated with calmodulin-Sepharose in the presence of 1 mM CaCl2 or 2 mM EGTA as described
under "Experimental Procedures." In the presence of
Ca2+, but not EGTA, Rad bound CaM-Sepharose, but not the
control GST-Sepharose (Fig. 1A).
Immunoprecipitation of the supernatant from the CaM-Sepharose experiment with anti-Rad antibody revealed that nearly all of the Rad
protein was depleted by prior binding to CaM-Sepharose in the presence
of Ca2+, while the immunoprecipitation of Rad from control
samples was unaffected by CaCl2 or EGTA treatment (Fig.
1B). Similar experiments were performed with purified Gem
incubated with CaM-Sepharose. Like Rad, Gem associated with CaM in the
presence of 1 mM CaCl2 (Fig. 1C, lane
2), and this could be disrupted by treatment with 2 mM
EGTA (Fig. 1C, lane 3). No detectable protein was associated with the control Sepharose 4B beads in the presence of 1 mM
CaCl2 (Fig. 1C, lane 1). Western immunoblotting
revealed that equal quantities of Gem were detected in the starting
material in the presence of CaCl2 or EGTA (Fig.
1D).
To determine if
Rad and CaM interact in intact cells, C2C12 cells overexpressing WT Rad
were lysed with Triton X-100 buffer and immunoprecipitated with
anti-Rad or anti-CaM antibodies. Western immunoblotting indicated the
presence of Rad in CaM immunoprecipitates (Fig.
2A, lanes 1 and 2) which varied
between 1 and 10% of the total cellular Rad protein, as determined by
comparison of blots of whole cell lysates. Treatment of cells with 5 µM ionomyocin prior to lysis did not appear to affect the
amount of Rad bound to CaM; however, it is likely that endogenous
stores of Ca2+ released upon lysis might have already
induced the binding of these proteins in the absence of added
Ca2+. Consistent with this, lysis of cells in the presence
of 2 mM EGTA disrupts Rad and CaM interaction (not shown).
In addition, when CaM immune complexes were washed with 2 mM EGTA, Rad was completely dissociated (Fig. 2A,
lane 3), whereas the quantity of Rad in anti-Rad immune complexes
was unaffected by this treatment (Fig. 2A, lane 6 versus lanes
4 and 5), suggesting Ca2+ dependence of the
Rad-CaM interaction in vivo.
Immunoprecipitation with anti-Rad antibody followed by Western
immunoblotting for CaM revealed the presence of CaM in anti-Rad immune
complexes (Fig. 2B, lanes 4 and 5) and the
dissociation of this complex by EGTA treatment (Fig. 2B, lane
6). In the presence of EGTA, CaM exhibited the expected altered
migration pattern (Fig. 2B, lane 3) (19). Thus, Rad and CaM
co-precipitate in immune complexes in a
Ca2+-dependent manner.
CaM-binding sites are rich in
hydrophobic and basic residues with the potential to form a basic
amphipathic
To determine whether Rad binds CaM via C-terminal residues, we assessed
the ability of a peptide corresponding to the final 30 amino acids of
Rad to compete for Rad binding to CaM-Sepharose. As shown in Fig.
4A, increasing concentrations of a peptide
corresponding to residues 278-308 of human Rad competitively inhibited
the interaction of Rad and CaM, whereas the same concentrations of a
peptide corresponding to the effector region of Rad (residues 115-127)
did not. Quantitation of these results revealed an IC50 of
5 µM for incubation in this assay when the concentration
of CaM was approximately 3 µM (Fig. 4B),
suggesting an approximate 1:1 stoichiometry of Rad-CaM interaction.
To further analyze the CaM-binding region of Rad, several deletion
mutants of Rad were constructed and expressed in C2C12 cells. The Rad
C297 construct terminates at residue 297, deleting the final 11 amino
acids of Rad which share 100% identity with Kir/Gem (1-3). The Rad
C278 construct deletes the final 30 amino acids, corresponding to the
presumed CaM-binding domain, and the Rad C249 construct deletes the
final 59 amino acids of Rad. As in previous experiments, incubation of
lysates of C2C12 cells overexpressing WT Rad with CaM-Sepharose
followed by Western blotting revealed
Ca2+-dependent binding of Rad to the
CaM-Sepharose (Fig. 4C, lane 3), which was disrupted by EGTA
treatment (Fig. 4C, lane 4). Endogenous Rad in control cells
(Fig. 4C, lanes 1 and 2) also bound in a Ca2+-dependent manner and was visible upon
longer exposure of the blots (not shown). Deletion of the C-terminal
residues 297-308 (C297 mutant) did not significantly affect the
ability of Rad to bind CaM (Fig. 4C, lanes 5 and
6). In contrast, deletion of C-terminal residues 278-308
(C278 mutant) abolished Rad binding to CaM (Fig. 4C, lanes 7 and 8), as did a larger deletion of residues 249-308 (C249
mutant, Fig. 4C, lanes 9 and 10), which creates a
molecule of identical length to Ras at the C terminus.
As noted above, in addition to the C-terminal extension, Rad also
contains 88 additional amino acids on the N terminus as compared with
Ras. To identify whether the N terminus of Rad contributes to the
binding to CaM, a deletion was made that removes the unique N terminus
of Rad. This mutant (N88) exhibited much lower levels of expression
than the other mutants (Fig. 4D, lanes 11 and
12), but an appropriate length protein could still be
detected by Western blotting of lysates following longer exposure (not
shown). Upon incubation of cell lysates with CaM-Sepharose, Rad-88
exhibited a striking enhancement in
Ca2+-dependent binding relative to WT Rad (Fig.
4C, lane 11). Quantitation of Rad protein bound to CaM
relative to the levels of expression revealed that CaM binding was
decreased by >90% with the Rad C278 and C249 C-terminal deletion
mutants, whereas the Rad N88 N-terminal mutant exhibited an approximate
24-fold enhancement in CaM binding relative to the wild type protein
(Fig. 4E). Thus, the residues of Rad critical for CaM
binding are contained within the region encompassing the C-terminal
residues 278-297, whereas the N terminus of Rad appears to encode a
region that may affect antibody recognition, protein expression or
stability, as well as a potential negative regulatory region for CaM
binding.
To determine whether the
interaction of Rad and CaM is influenced by the guanine
nucleotide-bound state of Rad, the binding of GST-Rad to CaM- Sepharose
was assessed following preloading of Rad with GDP or GTP
To further assess the influence of guanine nucleotide binding on Rad
and CaM interaction in vivo, C2C12 cells were used that overexpress wild type Rad (WT), Rad with a mutation (S105N) that abolishes GTP-binding activity and favors GDP binding, and is thus a
potential dominant-negative molecule, or Rad with a double mutation
(P61V/Q109H, PVQH) that results in a molecule with high intrinsic GTP
binding and GTPase activities in vitro (4). Lysates of these
cells were assayed by Western immunoblotting for Rad binding to
CaM-Sepharose (Fig. 5B) and for expression levels of the Rad
proteins (Fig. 5C). The binding to CaM relative to the expression level of WT, S105N, and PVQH Rad was quantitated in Fig.
5D. Results from three independent experiments revealed that the Rad S105N mutant exhibited an approximate 5-fold enhanced CaM
binding relative to the WT and PVQH proteins, despite lower relative
expression of this mutant. The binding of all three proteins was
disrupted by EGTA treatment (Fig. 5B). These results,
together with those in which GDP incubation enhanced binding, suggest
that the GDP-bound form of Rad preferentially associates with CaM.
A possible role of
CaM binding might be to alter the GTPase activity of Rad. To test this
hypothesis Rad and Rad bound to CaM were subjected to a GTP hydrolysis
assay in the presence or absence of a preparation of partially purified
Rad-GAP (4). GTP hydrolysis by Rad was stimulated approximately
2.5-fold in the presence of partially purified Rad-GAP (Fig.
6A). Rad bound to CaM exhibited a slight
elevation in Rad-GAP-stimulated GTP hydrolysis; however, this was not
significantly different from controls. In addition, CaM had no effect
on intrinsic Rad GTPase activity in the absence of Rad-GAP. Since CaM
preferentially binds the GDP form of Rad, we speculated that CaM might
affect the ability of Rad to bind GTP. However, binding studies
performed in the presence or absence of 5-fold molar excess of CaM did
not show an affect of CaM binding on the ability of Rad to bind either [3H]GTP (Fig. 6B) or [3H]GDP
(Fig. 6C), suggesting that CaM binding may not regulate guanine nucleotide binding of Rad.
A major cellular
effector of Ca2+-CaM signaling is the serine/threonine
kinase CaMKII (20, 21). To determine whether Rad exists in complex with
CaMKII, lysates from control cells, cells expressing WT Rad, and cells
expressing Rad mutants that exhibited altered binding to CaM (C278,
N88, and S105N) were subjected to immunoprecipitation with anti-CaMKII
antibody followed by Western immunoblotting to detect Rad (Fig.
7A). WT Rad overexpressed in C2C12 cells was
detected in anti-CaMKII immunoprecipitates; endogenous Rad was
detectable in these immunoprecipitates upon longer exposure (not
shown). Comparison of blots of whole cell lysates indicated that
approximately 2% of the total cellular Rad protein was present in
anti-CaMKII immunoprecipitates. Quantitation of Rad protein bound to
anti-CaMKII immune complexes relative to the levels of expression is
shown in Fig. 7C. In contrast to what was observed with the
CaM binding experiments, the C-terminal Rad mutant, C278, truncated at
residue 278 exhibited similar binding to CaMKII immune complexes as
compared with the WT and endogenous Rad (Fig. 7, A and
C). The N-terminal truncation, N88 (Fig. 7A, lane
4) exhibited an approximate 4-fold enhancement in binding relative
to WT Rad despite very low levels of expression of this mutant (Fig.
7B, lane 4). A longer exposure of this lane is shown, and
the migration of the 88 mutant is indicated in Fig. 7B, lane
6. Similar to the results for CaM binding, the S105N mutant (Fig.
7A, lane 5) exhibited an approximate 8-fold enhanced binding
to CaMKII, suggesting that this interaction may also be favored by the
GDP-bound form of Rad. Since the Rad truncated at residue 278 (C278)
retained the ability to bind CaMKII but was unable to bind CaM, further
experiments were performed to confirm that Rad binding to CaMKII is
independent of its interaction with CaM. Thus, lysates from cells
expressing WT Rad were subjected to immunoprecipitation with
anti-CaMKII antibodies followed by EGTA washing of the immune
complexes, a treatment which results in dissociation of Rad and CaM. As
shown in Fig. 7D, the presence of 1 mM
CaCl2 or 2 mM EGTA did not affect the
Rad·CaMKII complexes (compare lanes 2 and 3 versus
lane 1). Likewise, addition of a peptide corresponding to residues
278-308 of Rad at concentrations that disrupt Rad-CaM interaction did not disrupt Rad-CaMKII binding (Fig. 7, lanes 4 and
5). Thus, Rad is present in complex with CaMKII under
conditions in which Rad and CaM do not appear to interact.
Rad and
Kir/Gem possess several potential sites for CaMKII phosphorylation
based on the presence of the consensus sequence RXX(S/T)
(21). To determine whether these GTP-binding proteins can, in fact,
serve as a substrates for CaMKII, purified recombinant Rad and Gem were
incubated in a kinase reaction containing CaMKII, CaM, and
CaCl2, as described under "Experimental Procedures." Both Rad and Gem were phosphorylated by CaMKII as was the control substrate, MBP (Fig. 8A). Thrombin, which was
present in the protein preparations as a result of protein
purification, was not phosphorylated by CaMKII. For a time course
determination of Rad phosphorylation, GST-Rad or GST were incubated in
a kinase reaction with 100 units of a 33-kDa truncated version of
CaMKII for various times as described under "Experimental
Procedures." Phosphorylation of GST-Rad was apparent within 1 min and
peaked within 45 min at 30 °C (Fig. 8B). Phosphorylation
of GST control (29 kDa) was not observed under these conditions.
Quantitation of the counts incorporated into Rad at 45 min of
incubation revealed that Rad was phosphorylated with a stoichiometry of
0.6 ± 0.17 mol of ATP/mol of protein. For dose determinations of
the kinase, GST-Rad was incubated with 0-500 units of truncated CaMKII
for 45 min at 30 °C. GST-Rad was phosphorylated by CaMKII in a
dose-dependent manner with phosphorylation being apparent
with 10 units of CaMKII.
Rad
lacks the prenylation motifs found in most Ras-like molecules and is
located in both the cytoplasm and membrane of the cell (5). A portion
of Rad, however, is associated with the cytoskeleton and membrane
skeleton components by as yet undetermined mechanisms.2 To determine whether the
CaM-binding site of Rad influences localization, C2C12 myotubes
expressing WT and mutant Rad were subjected to fractionation into
cytosolic and membrane components. Western immunoblot analysis revealed
that endogenous Rad in control cells, WT Rad in overexpressing cells,
and the C297 C-terminal deletion mutant were distributed similarly
among cytoskeleton, membrane skeleton, total soluble membrane, and
cytosolic fractions (Fig. 9, lanes 1-12). In
contrast, Rad with a deletion of the CaM-binding domain, residues
278-308, was localized almost completely in the cytosolic fraction
(Fig. 9, lanes 13-16). Similarly, deletion of residues
249-308 yielded a cytosolic mutant (lanes 17-20), although
detection of this mutant was complicated by the presence of a
nonspecific protein band at 32 kDa present in the membrane skeleton
fraction of each cell type. Interestingly, the molecule with deletion
of the N-terminal 1-88 amino acids, which exhibited enhanced CaM
binding, was localized exclusively to the membrane skeleton,
cytoskeleton, and soluble membrane fractions (Fig. 9, lanes
21-24). Thus, the low level of detection of this mutant in
Western immunoblots of Triton X-100-soluble lysates (Fig. 4B, lanes 11 and 12) may be due in large part to the
relative absence of this protein from the cytosol and the insolubility
of the majority of the expressed protein. We were unable to detect
differences in the localization of CaM and CaMKII in fractions of these
cells obtained in the presence or absence of 2 mM EGTA (not
shown).
Rad and Kir/Gem are members of a novel class of Ras-related
GTP-binding proteins that contain unique and extended N and C termini
as compared with other Ras-like proteins (1-3). In this study we have
shown that these extended domains are involved in binding of CaM. Thus,
Rad and Gem bind CaM-Sepharose in a
Ca2+-dependent manner, and in cells, Rad
co-immunoprecipitates with CaM in a manner that is disrupted by EGTA
treatment. Therefore, the Rad family of proteins joins the growing list
of CaM-binding proteins, including CaMKII, myosin light chain kinase,
phosphofructokinase, plasma membrane Ca2+-ATPase,
neuromodulin, and, more recently, IQGAP1 and Ras-guanine nucleotide
releasing factor (22-26). Berchtold and Fischer (17) have shown that a
peptide corresponding to the final C-terminal 30 amino acids of Kir/Gem
binds to CaM in vitro, and in the current study we find that
a synthetic peptide based on the final 30 amino acids of Rad (residues
278-308) competes for Rad binding to CaM-Sepharose. Further evidence
that the CaM-binding domain of Rad is indeed located in the C-terminal
extended region involved deletion mutants. Thus, while deletion of
residues 297-308 from full-length Rad did not disrupt CaM binding,
deletion of residues 278-308 abolished CaM binding completely. Based
on these mutants, the specific residues critical for the CaM
interaction lie in the 19-amino acid region encompassing residues
278-297 of human Rad. Modeling of this region as a helical wheel
confirms the distribution of charged and hydrophobic residues typical
of CaM-binding protein. It is likely that the corresponding region of
Gem, which shares 79% homology to Rad and is also rich in charged and
hydrophobic residues, mediates its binding to CaM. We have shown
previously that in C2C12 cells, GDP-bound Rad binds skeletal muscle
The Rad-CaM interaction appears to be dependent on the guanine
nucleotide-bound state of Rad since GDP-loaded purified Rad and the Rad
dominant negative mutant (S105N) expressed in cells exhibit increased
binding to CaM in comparison to GTP In addition to binding CaM, Rad exists in complex with CaMKII, the
serine/threonine kinase which is a cellular target of CaM. Deletion of
the CaM-binding domain of Rad, treatment of immune complexes with EGTA,
and competition studies with the CaM-binding domain peptide indicate
that Rad interacts with CaMKII independent of its association with
Ca2+-CaM and that different domains of Rad are involved in
these interactions. In addition, Rad and Gem serve as in
vitro substrates for CaMKII. Although the significance of this
phosphorylation is not yet known, it is possible that CaMKII modulates
the function of Rad or its binding to CaM in a feedback mechanism. Two
consensus sites for CaMKII phosphorylation (serines 273 and 299) reside
near the region of CaM binding (1) and could potentially modulate the
Rad-CaM interaction by introducing a negative charge in the binding
region.
It has been noted that several CaM-binding proteins, including CaMKII
and myosin light chain kinase, contain a "CaM-like binding site"
within the sequence of the molecule (i.e. rich in
hydrophobic/anionic residues) which is proposed to act as an internal
inhibitor of CaM binding by interacting with the hydrophobic/cationic
CaM-binding site within the protein (22). Our mutagenesis studies
suggest that Rad may have such a region in that deletion of the
N-terminal 88 amino acids of Rad resulted in a molecule that exhibits
enhanced binding to CaM-Sepharose. The region of Rad spanning residues 68-88 contains a number of hydrophobic and negatively charged residues, making it a potential auto-inhibitory domain (22). Thus, the
unique N- and C-terminal regions of Rad may co-regulate CaM
interaction. It is possible, of course, that deletion of the N terminus
results in a more generalized alteration in conformation, exposing the
CaM-binding site or altering the guanine nucleotide binding
characteristics of this protein. In addition, accurate quantitation of
the CaM binding efficiency of the N-terminal deletion mutant (Rad N88)
is difficult since so little of the protein is detectable in the
soluble lysate samples.
Unlike Ras, which is localized to the plasma membrane via prenylation
of its C-terminal CAAX-like motif, Rad is localized mainly
to the cytoplasm, with portions of the protein associated with
cytoskeletal2 and membrane fractions (5). Although Rad
lacks a CAAX-like C-terminal motif, deletion of the
C-terminal residues 278-308 displaced Rad from the cytoskeleton,
membrane skeleton, and soluble membrane fractions to the cytosol,
whereas deletion of residues 297-308 did not. Thus, the critical
residues for Rad localization to membrane and cytoskeletal components
correspond to the CaM-binding domain of Rad, residues 278-297. It is
also possible that CaM binding serves to localize Rad. Consistent with
this, deletion of the N terminus of Rad, which enhances CaM binding,
correlates with displacement of Rad from the cytosol to the
cytoskeleton, membrane skeleton, and soluble membranes. Alternatively,
in addition to an intact N terminus, Rad localization may require
residues near, but distinct from, those C-terminal residues required
for CaM interaction.
In summary, we have shown that the Ras-like GTPases, Rad and Gem,
possess the unique quality of binding Ca2+-CaM and have
localized the site of CaM binding to the C-terminal residues 278-297
of human Rad. The interaction of Rad and CaM is dependent on the
guanine nucleotide bound state of Rad, and deletion mutations that
affect binding result in redistribution of Rad in the cell. In
addition, Rad is found in complex with CaMKII, and Rad and Gem serve as
in vitro substrates for this kinase, suggesting that the
Rad-like GTPases participate in Ca2+-activated signaling
cascades leading to the activation of serine kinases.
We thank Dr. Renee Emkey for valuable
discussions on this work. We also thank Dr. Kathleen Kelly of National
Institutes of Health for the gifts of the GST-Gem construct and the
anti-Gem antibodies.
Volume 272, Number 18,
Issue of May 2, 1997
pp. 11832-11839
©1997 by The American Society for Biochemistry and Molecular Biology, Inc.

ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
REFERENCES
-tropomyosin,
suggesting that Rad may participate in regulation of the cytoskeleton
(6). The Gem gene product is expressed in the G1 phase in
mitogen-activated T lymphocytes and shares approximately 60% amino
acid identity with Rad (2), whereas kir was isolated from a
pre-B-cell library and is overexpressed in cells expressing
BCR/ABL or v-abl (3). Murine kir and
gem are 98.4% identical in nucleotide sequence and encode
the same or very highly related proteins, referred to here as Kir/Gem
(3). When expressed in Saccharomyces cerevisiae, kir induces invasive pseudohyphal growth and may function
upstream of the STE20 kinase (7).
Construction of Rad Mutants and Transduction of Cell
Lines
primers spanned an internal PflM1 site
within the rad coding region. 3
primers contained an
EcoRI restriction site and an in-frame stop codon to
terminate translation at residues 249, 278, or 297 of Rad. Reaction
products were cloned into the PflM1-EcoRI sites of the
pBABE-WT Rad vector to replace the C-terminal sequences of the WT
construct. Deletion of the N-terminal 88 amino acids of Rad was
achieved using 5
primers containing a BamHI restriction
site and sequences homologous to rad beginning at codon 88 following an initiating methionine. 3
primers flanked the Rad
termination codon and contained an EcoRI restriction site.
Reaction products were cloned into the BamHI-EcoRI sites of the pBabe-Puro vector. All
constructs were confirmed by sequence analysis. Stable
puromycin-resistant cell lines expressing Rad mutants were established
as described previously (6).
-32P]GTP
(3 µCi) for 5 min at room temperature. GTP hydrolysis was carried out
as described using Rad-GAP partially purified by Mono S chromatography
(4). Equal counts of reaction products were subjected to thin layer
chromatography and analyzed using a Molecular Dynamics
PhosphorImager.
-32P]ATP at 30 °C
for 45 min. Reactions were terminated by the addition of SDS sample
buffer and analyzed by SDS-PAGE followed by autoradiography. For time
course determinations 0.4 µg of GST-Rad or GST were incubated in
kinase buffer containing 10 µCi of [
-32P]ATP (100 µM) and 100 units of CaMKII (truncated version, New England Biolabs) at 30 °C for the indicated times. For dose
determinations, 0.4 µg of GST-Rad was incubated in kinase buffer with
10 µCi of [
-32P]ATP (100 µM) and
0-500 units CaMKII (truncated version, New England Biolabs) at
30 °C for 45 min.
Rad Interacts with Ca2+-Calmodulin
Fig. 1.
Rad and Gem bind CaM in a
Ca2+-dependent manner. 500 µg of lysates
from C2C12 cells expressing WT Rad were incubated with CaM-Sepharose or
with the control GST-Sepharose in the presence of 2 mM EGTA
(lanes 1 and 3) or 1 mM
CaCl2 (lanes 2 and 4), as described
under "Experimental Procedures." The precipitates were subjected to
Western immunoblotting using anti-Rad antibody (A), and the
supernatants from these incubations were subjected to immunoprecipitation using anti-Rad antibody followed by Western immunoblotting for Rad (B). C, recombinant Gem
(0.5 µg), purified by thrombin cleavage from GST-Gem fusion protein,
was incubated with Sepharose 4B beads (lane 1) or
CaM-Sepharose in the presence of 1 mM CaCl2
(lane 2) or 2 mM EGTA (lane 3)
followed by Western immunoblotting using anti-Gem antibody. The
positions of Gem and an apparent degradation product are indicated.
Portions (1/100) of the starting material for C were
subjected to Western immunoblotting using anti-Gem antibody
(D).
[View Larger Version of this Image (17K GIF file)]
Fig. 2.
Co-immunoprecipitation of Rad and CaM.
Following overnight serum starvation, C2C12 cells expressing WT Rad
were treated with or without 5 µM ionomyocin for 5 min.
Lysates (1 mg) were subjected to immunoprecipitation (IP)
using anti-CaM or anti-Rad antibodies followed by Western
immunoblotting with anti-Rad antibody (A) or anti-CaM
antibody (B) as described under "Experimental Procedures." B, 50 ng of purified CaM and 100 µg of
total cellular lysate are included.
[View Larger Version of this Image (32K GIF file)]
-helix, often with charged and hydrophobic residues
residing on opposite sides of the helix (20). When modeled as a helical
wheel, Rad C-terminal residues 274-291 form an almost ideal
CaM-binding domain with a structure composed of opposing surfaces rich
in charged residues or long chain hydrophobic amino acids (Fig.
3).
Fig. 3.
Potential CaM binding region of Rad. A
helical wheel representation of Rad residues 275-293 reveals an
amphipathic secondary structure. Long chain hydrophobic residues are
circled. Positively charged residues are indicated as
+.
[View Larger Version of this Image (28K GIF file)]
Fig. 4.
CaM binds the C terminus of Rad. 500 µg of lysates from C2C12 cells expressing WT Rad were incubated with
10 µl of CaM-Sepharose or GST-Sepharose in a final volume of 500 µl
(approximately 3 µM final CaM concentration) as described
under "Experimental Procedures." Incubations were carried out in
the presence of 1 mM CaCl2, 2 mM
EGTA, or various concentrations of a Rad C-terminal peptide 278-308 or
a Rad effector domain peptide in the presence of 1 mM
CaCl2 (A). Precipitates were analyzed by Western
immunoblotting for Rad. Results were quantitated using a Molecular
Dynamics PhosphorImager (B). C, 1 mg of lysates
from puromycin-resistant C2C12 control cells (Puro,
lanes 1 and 2) or cells expressing WT
(lanes 3 and 4) and mutant Rad were incubated
with CaM-Sepharose in the presence of 1 mM
CaCl2 or 2 mM EGTA. Bound proteins
(C) and 10 µg of each lysate sample (D) were
analyzed by Western immunoblotting for Rad. C and
D, the numbering of C-terminal deletion mutants, C297 (lanes 5 and 6), C278 (lanes 7 and
8), and C249 (lanes 9 and 10), indicates the residue where the truncation mutant terminates. The
position of the N-terminal deletion mutant N88 (lanes 11 and 12), which lacks Rad residues 1-88, is indicated.
Endogenous Rad in puromycin (Puro) cells
(C, lane 1 and D, lanes 1 and 2) and the N88 Rad mutant (D, lanes 11 and
12) are visible following long exposure (not shown). Results
were quantitated using a Molecular Dynamics PhosphorImager and are
expressed as the quantity of protein bound to CaM (corrected for
differences in expression) relative to WT Rad (E).
[View Larger Version of this Image (30K GIF file)]
S. In
vitro GDP-bound Rad preferentially bound CaM as compared with
GTP
S-bound Rad with an approximate 8-fold increase in the quantity
of Rad protein bound (Fig. 5A). Removal of
Ca2+ by EGTA treatment disrupted binding of CaM, regardless
of guanine nucleotide association. Similar results were obtained when
Rad protein was cleaved from GST by thrombin treatment prior to the assay (not shown).
Fig. 5.
GDP-Rad preferentially binds CaM.
GST-Rad (0.5 µg) was incubated with 0.5 mM GDP or 0.5 mM GTP
S at room temperature for 30 min prior to the
addition of 20 µl of CaM-Sepharose. Following incubation at 4 °C
for 4 h, beads were washed and analyzed by Western immunoblotting
for Rad (A). Lysates (500 µg) from C2C12 cells expressing
WT Rad, a potential dominant negative Rad (S105N), or a mutant (PVQH)
which exhibits elevated GTP binding and hydrolysis in vitro
were incubated with CaM-Sepharose in the presence of 1 mM
CaCl2 or 2 mM EGTA (B). 10 µg of
the lysates was subjected to Western immunoblotting to detect the level
of Rad expression (C). The results from three independent
experiments were quantitated using a Molecular Dynamics PhosphorImager
and are expressed as the % of total Rad protein ± S.E.
(corrected for differences in expression) bound to CaM
(D).
[View Larger Version of this Image (20K GIF file)]
Fig. 6.
CaM does not affect Rad GTPase activity.
1 µg of purified GST-Rad was incubated with a 10-fold molar excess of
purified CaM for 1 h at 4 °C prior to assaying for GTPase
activity in the presence (+) or absence (
) of partially purified
Rad-GAP as described under "Experimental Procedures." Reaction
products were separated by thin layer chromatography and quantitated
using a PhosphorImager. Results are represented as %GDP hydrolyzed per
total guanine nucleotide bound (GDP + GTP) ± S.E. relative to control
samples for four independent experiments. 20 pmol of GST-Rad was
incubated with [3H]GTP (3 µCi/1.7 µM) or
[3H]GDP (3 µCi/1.7 µM) in the presence
(squares) or absence (circles) of 100 pmol of
purified CaM for the indicated times at room temperature, as described
under "Experimental Procedures." Reaction products were applied to
nitrocellulose filters, washed, and the radioactivity remaining on the
filters determined by scintillation counting. Results are expressed as
counts bound ± S.E. for [3H]GTP binding
(A) and [3H]GDP binding (B) and are
representative of three or two independent experiments, respectively,
each performed in duplicate.
[View Larger Version of this Image (12K GIF file)]
Fig. 7.
Rad is present in complex with CaMKII.
Lysates (1 mg) from C2C12 puromycin (Puro) control cells
(lane 1) or cells expressing WT Rad (lane 2), the
C-terminal deletion mutant, C278 (lane 3), the N-terminal
deletion mutant, N88 (lane 4), or the S105N
dominant-negative mutant (lane 5) were subjected to
immunoprecipitation with anti-CaMKII antibody followed by Western
blotting for Rad, as described under "Experimental Procedures"
(A). 30 µg of each lysate sample was subjected to Western
blotting for Rad expression (B, lanes 1-5). Lane
6 is a long exposure of lane 4, showing the migration
of the N-terminal mutant, N88. Results were quantitated using a
Molecular Dynamics PhosphorImager, as described in the legend to Fig.
4, and are expressed as the quantity of protein bound to CaMKII
(corrected for differences in expression) relative to the WT Rad
protein (C). D, 500 µg of lysate from cells
expressing WT Rad was subjected to immunoprecipitation with anti-CaMKII
antibody followed by Western immunoblotting for Rad.
Immunoprecipitations were carried out in lysis buffer (lane
1) or in the presence of 1 mM CaCl2
(lane 2), 2 mM EGTA (lane 3), or the
Rad C-terminal peptide 278-308 at 10 (lane 4) or 50 µM (lane 5).
[View Larger Version of this Image (22K GIF file)]
Fig. 8.
Rad and Gem are in vitro
substrates for CaMKII. 0.5 µg of Rad and Gem proteins, cleaved
from GST by thrombin treatment, were incubated with CaMKII in the
presence of 2 mM CaCl2, 2 mM CaM,
and [
-32P]ATP as described under "Experimental
Procedures" (A). Following incubation at 30 °C for 45 min, reaction products were visualized by SDS-PAGE and autoradiography.
The positions of CaMKII, Rad, Gem and the control substrate, MBP, are
indicated. B, 0.4 µg of GST-Rad or GST were incubated with
100 units of a truncated version of CaMKII at 30 °C for the
indicated times prior to SDS-PAGE and autoradiography. C,
0.4 µg of GST-Rad was incubated with 0-500 units of truncated CaMKII
at 30 °C for 45 min. The positions of GST-Rad, GST, and CaMKII
in B and C are indicated.
[View Larger Version of this Image (36K GIF file)]
Fig. 9.
Correlation of CaM binding with cellular
localization. C2C12 control cells or cells expressing WT and
mutant Rad were subjected to fractionation into cytoskeleton
(CSK), membrane skeleton (MSK), total soluble
membrane (TM), and cytosolic (CYT) components as
described under "Experimental Procedures." 50 µg of each fraction was analyzed by Western immunoblotting for Rad. The position of endogenous wild type (WT) Rad in puromycin-resistant control
C2C12 cells (Puro, lanes 1-4) and C2C12 WT Rad
overexpressors (lanes 5-8) is indicated. The numbering of
C-terminal deletion mutants, C297 (lanes 9-12), C278
(lanes 13-16), and C249 (lanes 17-20), indicates the residue where the truncation mutant terminates. The
migration positions of these mutants are indicated, as well as the
position of the N-terminal deletion mutant, N88, which lacks Rad
residues 1-88 (lanes 21-24).
[View Larger Version of this Image (67K GIF file)]
-tropomyosin following Ca2+ ionophore treatment (6).
Although the region of Rad that mediates this interaction has not been
determined, addition of a 5-fold molar excess of purified tropomyosin
did not affect the interaction of Rad and CaM, suggesting that the
binding regions reside in different locations in Rad (not shown).
S-loaded Rad and WT Rad in cells.
We speculated that CaM may thus serve to sequester Rad in its inactive
GDP-bound form, serving as a "switching off" mechanism; however, we
failed to show an affect of CaM binding on the guanine nucleotide
binding state of Rad, suggesting that this may not be the case.
Alternatively, in the presence of Ca2+, Rad may serve to
sequester CaM. Additionally, we have previously shown that treatment of
C2C12 cells with Ca2+ ionophore, A23187, results in a rapid
degradation of Rad protein (6). It is possible that
Ca2+-CaM serves a role in the switching off of Rad by
facilitating the degradation of Rad by Ca2+-activated
proteases. CaM does not catalyze the inactivation of Rad by GTP
hydrolysis, since CaM alone does not significantly affect Rad intrinsic
GTPase activity nor Rad-GAP-stimulated GTP hydrolysis.
*
This work was supported in part by National Institutes of
Health Grant DK 45935 (to C. R. K.), an American Diabetes Association mentor-based grant (to C. R. K.), National Institutes of Health Institutional Training Grant DK 07260, National Institutes of Health
P30DK36836 (to Joslin Diabetes Center DERC), and a postdoctoral fellowship from the Medical Research Council of Canada (to P. J. B.).The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
To whom correspondence should be addressed: Joslin Diabetes
Center, One Joslin Place, Boston, MA 02215. Tel.: 617-732-2635; Fax:
617-732-2593.
1
The abbreviations used are: GAP,
GTPase-activating protein; CaM, calmodulin; CaMKII,
calmodulin-dependent protein kinase II; GTP
S, guanosine
5
-O-(2-thiodiphosphate); DTT, dithiothreitol; GST,
glutathione S-transferase; MBP, myelin basic protein; Puro, puromycin; WT, wild type.
2
P. J. Bilan, J. S. Moyers, and C. R. Kahn,
manuscript submitted for publication.
©1997 by The American Society for Biochemistry and Molecular Biology, Inc.
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