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Volume 272, Number 18,
Issue of May 2, 1997
pp. 11928-11936
©1997 by The American Society for Biochemistry and Molecular Biology, Inc.
Phosphorylation and O-Glycosylation Sites of
Bovine Chromogranin A from Adrenal Medullary Chromaffin
Granules and Their Relationship with Biological Activities*
(Received for publication, December 19, 1996, and in revised form, February 27, 1997)
Jean-Marc
Strub
,
Odile
Sorokine
§,
Alain
Van Dorsselaer
§,
Dominique
Aunis
and
Marie-Hélène
Metz-Boutigue
¶
From the Institut National de la Santé et de la
Recherche Médicale, Unité 338 de Biologie de la
Communication Cellulaire, 67084 Strasbourg Cedex, France and
§ Centre National de la Recherche Scientifique, Laboratoire
de Spectrométrie de Masse Bioorganique, URA 31, Chimie Organique
des Substances Naturelles, 67084 Strasbourg Cedex, France
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
REFERENCES
ABSTRACT
Bovine adrenal medullary chromogranin A, the
major soluble component of chromaffin granules, is a phosphorylated
glycoprotein. In the present work, phosphorylation and glycosylation
sites were determined using mild proteolysis, peptide separation,
microsequencing, and mass analysis by electrospray and matrix-assisted
laser desorption ionization time-of-flight techniques. Seven
post-translational modification sites were detected. Two
O-linked glycosylation sites, each consisting of the
trisaccharide NeuAc 2-3Gal 1-3GalNAc 1, were located in the
middle part of the protein, on Ser186 and on
Thr231. The former residue is present in the antibacterial
peptide named chromacin. Four phosphorylation sites were located on
serine residues at positions Ser81 in the N-terminal region
of the protein and Ser307, Ser372, and
Ser376 in the C-terminal end. One additional
phosphorylation site was found on the tyrosine residue at position
Tyr173, the N-terminal amino acid of chromacin. With the
exception of the phosphorylation on Tyr173, all of the
other post-translational modifications are located on highly conserved
chromogranin A regions, implying some biological importance.
INTRODUCTION
In bovine adrenal medulla, secretory granules from chromaffin
cells contain a complex mixture of secretory products, which include
low molecular mass constituents such as catecholamines, ascorbate,
nucleotides, calcium, enkephalins, and several water-soluble proteins.
Among the latter, chromogranins/secretogranins a family of acidic
secretory proteins, have been extensively studied.
CGA1 is the major member (40% of total
soluble granule proteins) of this family, and these glycoproteins are
expressed in a large number of endocrine and neuroendocrine cells and
in neurons (1-4). At the subcellular level, chromogranins are
exclusively found in the soluble core of hormone and neurotransmitter
storage vesicles and are released during exocytosis. Chromogranins have
been proposed to play multiple roles in the secretory process. An
intracellular function as a "helper" protein in the packaging of
peptides, hormones, and neuropeptides by virtue of their ability to
aggregate in the low pH and high calcium environment of the trans-Golgi
network and as modulators of the processing of these components has
been suggested (3). Extracellularly, different members of the
chromogranin family are now considered as precursor proteins that are
actively processed into peptides within the secretory granules (for
reviews, see Refs. 1 and 5). Recently, we reported a detailed study of
the intracellular and extracellular processing of CGA and chromogranin B in bovine chromaffin granules from intact gland and from cultured chromaffin cells (6, 7).
The proteolytic processing of CGA is a topic of growing interest, since
biological activities have been attributed to specific domains located
along its sequence. For example, in the N-terminal domain, a peptide
corresponding to the sequence 1-113 has been shown to inhibit hormone
secretion in the bovine parathyroid gland (8); a homologous peptide,
betagranin, corresponding to the sequence 1-115 has been isolated from
rat pancreas, but its function has not yet been defined (9).
Vasostatins are peptides containing the N-terminal sequence 1-76/113
(10) and have been found to exhibit vasoinhibitory activity of isolated
human blood vessels (11, 12). As early as 1988, it was established that
CGA is the precursor of a peptide that inhibits the secretory activity of chromaffin cells (13). In addition, pancreastatin (248-293) is a
peptide with multiple properties, since it negatively modulates insulin
secretion from endocrine pancreatic islets (14, 15), amylase release
from exocrine pancreas (16), and acid secretion from parietal cells
(17). Another CGA-derived peptide, located in the C-terminal domain of
CGA, parastatin (347-419), inhibits parathyroid cell secretion (18).
In addition to the autocrine or paracrine role in hormone secretion of
these CGA-derived peptides, we have recently shown that numerous
peptides with antibacterial activity are present as water-soluble
components of bovine chromaffin granules and are released during
secretion (7, 19-22). For several antibacterial peptides derived from
CGA and proenkephalin-A, structural features and more particularly
post-translational modifications have been directly related to
biological activity (20, 21).
CGA is a single polypeptide chain of 431 residues, with an apparent
molecular mass of 70 kDa as estimated by SDS-polyacrylamide gel
electrophoresis and a pI of 4.7-5.2 (6). The amino acid sequence of
bovine CGA (23, 24) indicates a real molecular mass of 48 kDa for the
unmodified form of this protein. The difference between the apparent
(70 kDa) and theoretical molecular mass (48 kDa) probably results from
post-translational modifications (i.e. glycosylation,
phosphorylation, and sulfation) and the abundance of acidic residues
(25%) that cause a slower migration during electrophoresis in the
presence of sodium dodecyl sulfate (for a review, see Ref. 5).
Previously, CGA has been described as a glycoprotein containing 5.4%
carbohydrate (mass/mass), consisting of small glycan moieties (25);
consensus sequences for N-glycosylation (NX(S/T))
are, however, not present in the primary structure (26). Furthermore,
CGA has been described to be a phosphoprotein, with a ratio of five
phosphorylated serine residues per protein molecule (27). There is a
modest incorporation of sulfate into CGA (28), and it is bound to
O-glycans and not to tyrosine residues (21, 29).
Recently, using a combination of gas chromatography and mass
spectrometry, we described the oligosaccharide moiety to be present in
CGA as trisaccharides including NeuAc 2-3Gal 1-3GalNAc 1
O-linked to a serine and/or threonine residue (21).
Furthermore, studying the structural properties of new antibacterial
CGA-derived peptides G- and PG-chromacin (CGA-(173-194)), the residue
Ser186 was identified as an O-glycosylation
site, and the tyrosine residue (Tyr173) was found to be
phosphorylated. We also demonstrated that these two post-translational
modifications are both necessary for the antibacterial activity of the
CGA-(173-194) fragment.
The present paper deals with the complete determination of the
phosphorylation and carbohydrate binding sites of CGA from bovine
adrenal medullary chromaffin granules. The strategy consists of
characterizing the structure of modified phosphorylated and O-glycosylated peptides that were isolated after proteolytic
cleavage of CGA with endoproteinase Lys-C. We have performed a detailed study using separation by reverse phase HPLC, chemical modification of
phosphorylated peptides, and complete analysis by sequencing and mass
spectrometry using electrospray mass spectrometry (ES/MS), liquid
chromatography/mass spectrometry (LC/MS), and matrix-assisted laser
desorption-ionization time-of-flight (MALDI-TOF) mass spectrometry. Bovine CGA contains five phosphorylated residues located in four endoproteinase Lys-C-generated peptides (CGA-(173-194),
CGA-(297-314), CGA-(78/79-109), and CGA-(331-420/421)) and two
polysaccharide attachment sites linked to serine and threonine residues
located within the CGA-(173-186) and CGA-(222-243) regions,
respectively. The location of these sugar- and phosphate-rich peptides
in the whole protein is specified in relation to the primary structure of bovine CGA. Sequence alignment of these modified peptides with CGA
fragments of different species has led us to discuss these results in
relation with phylogenetic features and specific physiological processing.
EXPERIMENTAL PROCEDURES
Purification of CGA- and CGA-derived Peptides
Secretory granules were isolated from bovine adrenal medulla
(30), and soluble proteins were separated from membranes after osmotic
shock-induced lysis and high speed centrifugation (31). CGA was
purified by reverse phase HPLC on a Macherey Nagel Nucleosil 300-5C18
column (4 × 250 mm; particle size 5 mm and pore size 100 nm) with
the Applied Biosystems HPLC system 140 B as described previously (7).
Then CGA (10 nmol) was digested for 2 h at 37 °C with
endoproteinase Lys-C at a protein:proteinase weight ratio of 1000:1 in
100 mM Tris-HCl, pH 8.3. Generated peptides were then
separated on a Macherey Nagel 300-5C18 column. Absorbance was
monitored at 214 nm, and the solvent system consisted of 0.1% trifluoroacetic acid in water (solvent A) and 0.1% trifluoroacetic acid, 30% water, 69.9% acetonitrile (solvent B). Material was eluted
at a flow rate of 0.7 ml/min using, successively, a gradient of 0-25%
B in A over 10 min followed by a gradient of 25-75% over 50 min. Each
peak fraction was manually collected and concentrated by evaporation,
but not to dryness.
Sequence Analysis
The sequence of purified CGA-derived peptides was determined in
our laboratory by automatic Edman degradation on an Applied Biosystems
473 A microsequencer. Samples (100 pmol) were loaded onto
polybrene-treated and precycled glass fiber filters (6). To identify
phosphorylated residues, samples were modified with ethanethiol
according to the method previously described (32). Before sequencing,
reagents were removed, using the ProSorbTM sample
preparation cartridge (Applied Biosystems, division of Perkin-Elmer).
Mass Spectrometry Analysis
ES/MS
ES/MS analysis was done on a VG Bio-Q quadrupole mass
spectrometer (Fisons Bio-Q; VG Bio-Tech) with a mass range of 4000 Da and operating in the positive ion mode (33). The peptide was dissolved
in water/acetonitrile/acetic acid (49/50/1; v/v/v) at a concentration
of about 2-5 pmol/µl. Aliquots (10 µl) were introduced into the
ion source at a flow rate of 4 µl/min. Scanning was usually performed
from m/z = 500 to
m/z = 1500 in 10 s with the resolution adjusted so that the peak at m/z = 998 from
heart myoglobin was 1.5-2 wide on the base. Calibration was performed
using the multiply charged ions produced by a separate introduction of
horse heart myoglobin (16950.4 Da).
LC/MS
In order to isolate and characterize glycopeptides,
we have performed LC/MS analysis of CGA-derived peptides obtained after endoproteinase Lys-C digestion of CGA. Then, CGA (500 pmol) was digested for 2 h at 37 °C with endoproteinase Lys-C at a
protein-to-proteinase weight ratio of 1000:1 in 100 mM
Tris-HCl, pH 8.3. Then peptides were separated with an HPLC system
(Applied Biosystems 140 A solvent delivery system) equipped with a UV
detector (UV Waters detector 386) on a narrowbore Macherey Nagel
Nucleosil 300-5C18 column (2 × 150 mm). Absorbance was monitored
at 214 nm, and the solvent system consisted of 0.1% trifluoroacetic
acid/water (solvent A) and 0.1% trifluoroacetic acid/acetonitrile
(solvent B). Material was eluted at a flow rate of 250 µl using a
gradient of 0-80% B in A over 80 min. A major part of the eluent
(90%) was analyzed by UV detection, and an aliquot (10%) was measured
by LC/MS (34). The mass spectrometer was calibrated under conditions
using a mixture of polyethylene glycols (average masses 400 and 2000 Da). Spectra were scanned over m/z 320-1800 for 6 s,
and the total ion current was recorded.
MALDI-TOF Mass Spectrometry
This mass spectrometry analysis
was carried out on a Brucker BIFLEXTM matrix-assisted
laser time-of-flight mass spectrometer equipped with the
ScoutTM high resolution optics with an X-Y multisample
probe, a gridless reflector, and the HIMASTM linear
detector. This instrument has a maximum accelerating potential of 30 kV
and may be operated either in the linear or reflector mode. Ionization
was accomplished with a 337-nm beam from a nitrogen laser with a
repetition rate of 3 Hz. The output signal from the detector was
digitized at a sampling rate of 250 MHz in linear mode and 500 MHz in
reflector mode using a 1-GHz digital oscilloscope (Lecroy model). The
instrument control and data processing were accomplished with software
supplied by Brucker using a Sun Sparc workstation. These studies
were realized according to the procedure previously described (21).
Sequence Comparisons
Sequence alignment of bovine CGA sequences with corresponding
fragments of CGA from different species was performed using the Clustal
V multiple sequence alignment program (35). Chromogranin sequences were
retrieved from the Swiss-Prot data base.
RESULTS
In order to determine phosphorylation and glycosylation
sites included within the bovine CGA sequence, the protein was purified according to the procedure previously described (21) and digested by
endoproteinase Lys-C (see "Experimental Procedures"). The generated fragments were separated by HPLC on a reverse-phase C18 column. Our
purpose was to identify peaks eluting at different times but containing
peptides sharing identical peptidic sequences. The various elution
times of these peptides indicated differences due to post-translational
modifications. Taking into account these parameters, the chromatogram
was divided into five regions from I to V (Fig.
1).
Fig. 1.
Isolation by HPLC of CGA-derived peptides
generated after endoproteinase Lys-C digestion. A, elution
profile of the endoproteinase Lys-C digest on a Macherey Nagel
reverse-phase Nucleosil 300-5C18 column (4 × 250 mm). Absorbance
was monitored at 214 nm, and elution was performed with a linear
gradient as indicated on the right scale. The five areas
(see "Results") named I, II, III, IV, and V are indicated.
B, the different peaks present in each area, I to IV, are
shown.
[View Larger Version of this Image (26K GIF file)]
Identification of Phosphorylation Sites on CGA Protein
Structural Characterization of Phosphorylated Peptides Present in
Area I Peaks
The four peaks present in region I corresponding to
chromacin-derived peptides previously characterized as CGA-(173-194)
(YPGPQAKEDSEGPSQGPASREK) (21). The N-terminal Tyr173 has
already been identified as one of the phosphorylation sites (21).
Structural Characterization of Phosphorylated Peptides Present in
Area III Peaks
After automatic Edman degradation of peptide
material recovered in peaks 1 and 2 of region III, we identified a
major fragment with the sequence SGEPEQEEQLSKEWEDAK that corresponds to
CGA-(297-314). To determine the post-translational modification
of the more polar peptide (peak 1), comparative mass spectra
analysis was performed by ES/MS (Fig. 2). Using the
MacPro Mass program, the theoretical molecular mass of this peptide was
estimated to be 2118.8 Da, corresponding to the experimental mass of
the peptide recovered in peak 2. In contrast, the 2198.8-Da molecular
mass of the peptide in peak 1 with a value of 2198.8 Da represents a
difference of 80 Da, suggesting a phosphorylated serine residue, either
Ser297 or Ser307. The material present in peak
1 was treated with alkaline phosphatase; this removed a mass of 80 Da,
confirming the presence of a phosphate group. To identify which serine
residue was phosphorylated, the peptide was submitted to the Meyer
modification in the presence of ethanethiol prior to sequencing (32). A
phenylthiohydantoin-S-ethylcysteine was identified in
position 307.
Fig. 2.
Electrospray ionization mass spectrometry
analysis of the CGA-derived peptides present in peak 1 of area III.
A, a component recovered in A2 and A3 was identified as
CGA-(297-314) with an experimental molecular mass of 2198.8 Da, while
the calculated molecular mass was 2118.8 Da. In addition, a component
recovered in B1 and B2 with a molecular mass of 1185.3 Da corresponds
to CGA-(60-70) with a calculated molecular mass of 1186.4 Da.
B, primary structure of the phosphorylated fragment
CGA-(297-314); S*, phosphorylated serine residue.
[View Larger Version of this Image (25K GIF file)]
Sequencing and mass spectra analysis of peak 1 material indicated the
presence of an additional peptide corresponding to CGA-(60-70). The
experimental molecular mass of 1185.3 Da corresponds to the theoretical
molecular mass of the unmodified form of this peptide.
Structural Characterization of Phosphorylated Peptides Present in
Area IV Peaks
Sequencing and mass spectrometry analysis of the
material in the peaks of region IV revealed two groups of two peptides.
After sequencing, the four peptides (numbered 1-4; Fig. 1) were
identified as CGA fragments corresponding, respectively, to
CGA-(78-109) (KHSSYEDELSEVLEKPNDQAEPKEVTEEVSSK) (peaks 1 and 3) and
CGA-(79-109) (HSSYEDELSEVLEKPNDQAEPKEVTEEVSSK) (peaks 2 and 4). To
characterize the structural differences between the peptides in peaks 1 and 3 and those in peaks 2 and 4, they were analyzed by mass
spectrometry (Fig. 3). A theoretical molecular mass of
fragments 78-109 and 79-109 was calculated to be 3662.9 and 3534.7 Da, respectively. Experimental molecular masses of peptides in peaks 2 and 4 fitted with these values, indicating that these were unmodified
peptides. In contrast, the molecular mass of peptides in peaks 1 and 3 were evaluated to be 3741.63 Da and 3613.50 Da, showing an additional mass of 80 Da. CGA fragment 78-109 included seven potential
phosphorylation sites (Ser80, Ser81,
Tyr82, Ser87, Thr103,
Ser107, and Ser108).
Fig. 3.
Electrospray ionization mass spectrometry
analysis of CGA-derived peptides contained in peaks 1-4 of area IV.
Peak 1, a component recovered in A3, A4, and A5 with an
experimental molecular mass of 3741.63 Da was identified as modified
CGA-(78-109). Peak 2, a component recovered in A3 and A4
with an experimental mass of 3613.50 Da was identified as modified
CGA-(79-109). B3/B4, experimental molecular mass of contamination. Peak 3, a
component recovered in A3, A4, and A5 with an experimental molecular
mass of 3661.86 Da corresponds to CGA-(78-109). Peak 4, a
component recovered in A3 and A4, with an experimental molecular mass
of 3533.65 Da corresponds to CGA-(79-109). S*,
phosphorylated serine residue.
[View Larger Version of this Image (27K GIF file)]
Upon treatment with alkaline phosphatase, peptide 1 lost 80 Da,
confirming the presence of a phosphate group. Location of the
phosphorylated residue was determined after ethanethiol derivatization and microsequencing; a phenylthiohydantoin-S-ethylcysteine
was identified in position Ser81.
Structural Characterization of Phosphorylated Peptides Contained in
Area V Peaks
The first 23 amino acids of the major peptide
(>90%) recovered in region V were sequenced as
RLEGEEEEEEDPDRSMRLSFRAR. This sequence corresponds to the CGA fragment
beginning at position 331 and results from a cleavage of the
Lys330-Arg331 residues. Mass spectra analysis
showed the presence of four molecular species with molecular masses of
2741.26, 7859.43, 10578.03, and 10677.50 Da (Fig. 4).
The lower molecular mass may be assigned to the fragment 332-354, with
a theoretical molecular mass of 2738.90 Da. We then focused on the
higher molecular mass components. The calculated mass difference
between 10677.50 and 10578.03 Da suggested the presence of a valine
residue (99 Da) at the C-terminal end of the peptide. Taking into
account the N-terminal sequence, the molecular mass, and the presence
of C-terminal valine, we speculated that the CGA fragments 331-420/421
with calculated molecular masses of 10418.3 and 10517.5 Da probably
correspond to the unmodified peptides eluting in peaks of region V. Comparing the experimental masses (10578.03 and 10677.50 Da) with
theoretical values, a difference of 160 Da was obtained, suggesting the
presence of two phosphorylated residues. Indeed, this fragment
CGA-(331-420/421) possesses nine potential phosphorylation sites
Ser345, Ser349, Tyr355,
Ser372, Ser376, Tyr388,
Ser398, Ser410, and Ser412.
Fig. 4.
Electrospray ionization mass spectrometry
analysis of CGA-derived peptides present in area V. A, a
component recovered in A8-A15, with an experimental molecular mass of
10578.03 Da was identified as modified CGA-(331-420); a component
recovered in B3 and B4, with an experimental molecular mass of 2741.26 Da corresponds to CGA-(332-354); a component recovered in C6-C9, with
an experimental molecular mass of 7859.43 Da was identified as modified
CGA-(354-421); a component recovered in D8-D14, with an experimental
molecular mass of 10677.50 Da was identified as modified
CGA-(331-421). B, primary structure of modified CGA-derived fragments 331-420/421; S*, phosphorylated serine
residues.
[View Larger Version of this Image (35K GIF file)]
To characterize the two sites with post-translational modifications, a
mixture of peptides 331-420 and 331-421 was treated with alkaline
phosphatase. After this treatment, mass spectra analysis revealed the
presence of two peptides with respective molecular masses of 10418.30 Da and 10517.30 Da instead of 10578.03 and 10677.50 Da. This observed
mass loss of 160 Da confirmed the presence of two phosphate groups on
both peptides.
After tryptic digestion of the peptides 331-420 and 331-421, the two
phosphorylated residues were identified. The generated peptides were
separated by HPLC (Fig. 5), and their primary structure was determined from microsequencing and MALDI-TOF analysis (Fig. 5B). By comparing the experimental and calculated molecular
mass of peptide CGA-(367-386) (2430.2 versus 2267.5 Da),
the addition of 160 Da indicated the phosphorylated residues on this
peptide. After derivatization of the GWRPNSREDSVEAGLPLQVR peptide with ethanethiol, it was unambiguously demonstrated that the phosphorylated residues were located in positions Ser372 and
Ser376.
Fig. 5.
Purification and structural characterization
of the modified tryptic peptide CGA-(367-386). Material included
in area V (Fig. 1) and corresponding to CGA-(331-420/421) was
submitted to tryptic digestion. A, elution profile of the
tryptic digest by chromatography on a Macherey Nagel reverse-phase
Nucleosil 300-5C18 column (4 × 250 mm). Absorbance was monitored
at 214 nm, and elution was performed with a linear gradient as
indicated on the right scale. The arrow shows the
peak containing the modified peptide. B, MALDI-TOF mass
spectrometry of the modified fragment with an experimental molecular
mass of 2430.2 Da and corresponding to modified fragment
CGA-(367-386). C, primary structure of bisphosphorylated peptide CGA-(367-386). S*, phosphorylated serine
residues.
[View Larger Version of this Image (20K GIF file)]
Thus, the peptide with the experimental molecular mass of 7859.43 Da
(Fig. 4A) probably corresponds to the bisphosphorylated CGA
fragment 357-421 (calculated molecular mass 7698.40 Da).
Location of the Five Phosphorylated Residues of Bovine CGA along
the Polypeptide Chain
The location of the observed phosphorylated residues of CGA along
the CGA backbone are represented in Fig. 6. The present data indicate that (i) four of the phosphorylated residues are located
on serines at positions Ser81, Ser307,
Ser372, and Ser376, (ii) two of those serine
residues at positions Ser81 and Ser307 belong
to glutamic acid-rich sequences (SS81YEDELESEVLE and
EPEQEEQLS307KEWE), (iii) one phosphorylation site is
present on a tyrosine residue at position Tyr173, (iv) this
phosphorylated Tyr173 is included in the proline-rich
sequence LPSPKY173PGPQAKEDSEGPSQGP, (v) as far as can be
determined with the technology used in the present work, there are no
more than five phosphorylation sites per bovine CGA molecule.
Fig. 6.
Schematic representation of
post-translational modifications included within bovine CGA polypeptide
chain. In panel A, S, T, and
Y represent serine, threonine, and tyrosine residues. P, phosphorylated sites on positions Ser81,
Tyr173, Ser307, Ser372, and
Ser376. GalNAc, Gal, and NeuAc O-glycosylated
sites on positions Ser186 and Thr231 are shown.
Panel B, chemical structure of the trisaccharide
NeuAc 2-3-Gal 1-3GalNAc 1 O-linked to
Ser186 and Thr231.
[View Larger Version of this Image (18K GIF file)]
Identification of O-Glycosylation Sites
From structural properties of unmodified and modified
CGA-(173-194) chromacin peptide, we have previously shown that bovine CGA contains at least one trisaccharide moiety with the
NeuAc 2-3Gal 1-3GalNAc 1 sugar sequence (21). G- and
PG-chromacin (glycosylated and phosphorylated/glycosylated chromacin)
are O-glycosylated peptides in which Ser186 is
the residue to which the sugars are linked.
To further characterize other glycosylated fragments present on CGA,
the protein was digested with endoproteinase Lys-C and analyzed by
LC/MS.
LC/MS Analysis of Endoproteinase Lys-C-generated Fragments
In
Fig. 7, the HPLC chromatogram (A), the single
ion recording (SIR) of specific ions characteristic of
glycosylation sites (B), and the total ionic current
(TIC) of the chromatogram (C) are shown. In
B, the presence of O-glycosylated peptides were recovered in peaks of regions I and II (Fig. 1). Analysis of region I
has been previously reported with the characterization of G- and
PG-chromacin (21).
Fig. 7.
On-line LC/MS of the endoproteinase Lys-C
digest of bovine CGA. Endoproteinase Lys-C digest of bovine CGA
(500 pmol) was analyzed by LC/MS (narrowbore with postcolumn split), as
described under "Experimental Procedures." In panel A,
the y axis represents the absorbance at 214 nm (0.2 absorbance units as full scale), and the x axis indicates
the elution time of the different fractions. Panel B, single
ion recording specific to glycopeptides (SIR). Panel
C, specific total ion current (TIC).
[View Larger Version of this Image (27K GIF file)]
Structural Characterization of O-Glycosylated Peptides Contained in
Area II Peaks
Sequencing of material included in the three peaks
eluting in region II indicates the presence of a peptide corresponding to CGA-(222-243). Automatic Edman degradation of peak 3 (Fig. 1B) indicates that Thr231 was not detectable,
suggesting an O-linked attachment site. To confirm this
hypothesis, this peptide was analyzed by ES/MS (Fig. 8A). The data show three different molecular
species with respective molecular masses of 2262.65, 2627.45, and
2919.45 Da. The molecular mass of 2262.65 Da might be attributed to the
unmodified fragment CGA-(222-243), while the other species are likely
to be the glycosylated forms of the same peptide (Fig. 8B).
The molecular masses of 2919.45 and 2627.45 Da corresponded,
respectively, to the O-glycosylated peptide with the
trisaccharide NeuAc 2-3Gal 1-3GalNAc 1 moiety and to the
disaccharide after the loss of terminal sialic acid.
Fig. 8.
Electrospray ionization mass spectrometry of
CGA-derived peptides present in peak 3 of area II. A, a
component recovered in A2 and A3 with an experimental molecular mass of
2919.45 Da was identified as O-glycosylated CGA-(222-243)
with the trisaccharide NeuAc 2-3-Gal 1-3GalNAc -1; a component
recovered in B2 and B3 with an experimental mass of 2627.45 Da was
identified as O-glycosylated CGA-(222-243) with the
disaccharide Gal 1-3GalNAc -1; a component recovered in C2 and C3
with an experimental mass of 2262.65 Da corresponds to the CGA-derived
peptide CGA-(222-243). B, primary structure of modified
CGA-derived fragments CGA-(222-243). T*, O-glycosylated threonine residue with the trisaccharide
NeuAc 2-3-Gal 1-3GalNAc -1 and;
T+, O-glycosylated threonine residue
with the disaccharide Gal 1-3GalNAc -1.
[View Larger Version of this Image (28K GIF file)]
Location of the Two O-Glycosylation Sites of Bovine CGA within the
Polypeptidic Chain
A schematic representation of bovine CGA showing the two
O-linked carbohydrate attachment sites Ser186
and Thr231 located in the middle part of the whole protein
is given in Fig. 6. The sequence in the vicinity of the serine residue
Ser186 (PSQGP) fits with the two characteristic sequence
patterns described by Wilson (36) for O-glycosylation sites.
In contrast, the fragment 222-243 around threonine residue
Thr231 is a proline-rich sequence (40%) but lacks of the
Wilson consensus pattern.
DISCUSSION
Chromogranins A and B occur in multiple secretory cell types of
numerous species within the animal kingdom (1, 37-40). Multiple neuroendocrine sources other than the adrenal medulla appear to contribute to the high basal circulating CGA concentration in man (1).
The widespread occurrence of CGA is indicative of some important
biological roles for this protein. Despite the fact that CGA has been
widely studied since its discovery 30 years ago, the characterization
of possible functions is still an open question.
On the basis of secondary and tertiary structures predicted from its
primary structure, CGA possesses a "random coil" structure (1). In
addition, according to Kyte and Doolittle predictions (41), this
protein is very hydrophilic throughout the length of its polypeptide
(6). This is in accordance with its biochemical properties, and in
particular with the observation that CGA remains soluble after boiling
for several minutes (29). Concerning the post-translational
modifications, CGA has previously been described to be a
glycophosphoprotein containing small O-glycosidically linked
carbohydrate moieties (25) and five phosphorylated residues (27).
Besides the 70-kDa molecular species, several observations have
reported the presence of an SDS 80-90-kDa diffuse form of chromogranin
A immunoreactivity as full-length chromogranin A-core proteoglycan in
secretory granules from bovine adrenal medulla and from PC12 cells
(42). The functional significance of this proteoglycan in hormone
storage vesicles is unknown. Furthermore, several studies have
documented the presence of other post-translational modifications on
the CGA molecule including methylation via protein carboxymethylase
(43, 44) and transglutamination (45, 46).
In the present paper, we report for the first time the full
characterization of seven post-translational modifications that are
present along the polypeptide chain of CGA from bovine chromaffin granules. Five phosphorylated residues were found to be on residues Ser81, Tyr173, Ser307,
Ser372, and Ser376. This finding is in
agreement with the quantification of the phosphorylated residues
previously reported (27). The novel interesting observation was the
presence of a phosphorylated tyrosine residue. Tyrosine phosphorylation
is not a common post-translational modification, since it represents
only 0.03% of the phosphorylated amino acids in normal cells (47). The
significance of this tyrosine phosphorylation is not yet known,
although we have recently reported that chromacin, the CGA-derived
peptide 173-194, displays antibacterial activity when the N-terminal
tyrosine 173 residue is phosphorylated (21). On the basis of a protein
consensus domain specific to kinases, it is possible to predict that
protein kinase C may introduce a phosphate group on residues
Ser81, Ser372, and Ser376, while
protein kinase A may modify residue Ser307 and in addition
Ser372 and Ser376. These two protein kinase
activities have previously been characterized within the chromaffin
intragranular matrix (48-50), although their significance is still
unknown. More recently, the presence of an isoform of CaM kinase II in
bovine adrenal medullary cells was reported, and purified CGA was found
to be a substrate to cyclic AMP-dependent protein kinase,
to protein kinase C as well as to CaM kinase II (51). Furthermore, a
close relationship between CaM kinase II activation, catecholamine
secretion, and tyrosine hydroxylase activation in cultured adrenal
medullary cells was demonstrated. Thus, sequential CGA
post-translational phosphorylation may take place either at early steps
prior to its incorporation into granule or within the secretory granule itself.
Concerning the O-glycosylation sites included on bovine
adrenal medullary CGA, we had previously located a unique carbohydrate moiety composed of the trisaccharide NeuAc 2-3Gal 1-3GalNAc 1 on the serine residue Ser186 (21). In the present work, we
identified a second trisaccharide attachment site on residue
Thr231. From mass spectrometry, it appeared that these two
residues were the only ones with carbohydrate moieties. In 1991, Wilson (36) described the structural requirements for the addition of
O-linked N-acetyl galactosamine to proteins; the
most prominent feature in the vicinity of O-glycosylated
sites is the significantly increased frequency of proline residues,
especially at positions 1 and +3 relative to the glycosylated residue
(i.e.
PX1X2P).
In contrast with chromacin, the glycopeptide 173-194, which has the
characteristic sequence pattern
PX1X2P
surrounding Ser186, the second glycosylation site in the
peptide 222-243 (AVPEEESPPAAFKPPPSLGNK) has the sequence
PPXXXXPPP surrounding Thr231.
Although Wilson sequence is absent in this peptide, the occurrence of
multiple proline residues may represent a characteristic feature. The
presence of these two trisaccharides on bovine adrenal medullary CGA
gives rise to a calculated sugar:protein ratio of 2.7%; this value
corresponds to half of the sugar content that has previously been
reported (25). This difference is probably due to the fact that the
protein mass used for calculation was that determined from
electrophoretic mobility, which was 2-fold higher than the true mass.
From mass spectrometry analysis, we also identified glycopeptides
173-194 and 222-243 with the complete trisaccharide structure; the
desialylated peptides and the glycan-free peptides were recovered.
Approximately half of the CGA peptides are glycosylated, perhaps due to
incompletely achieved post-translational modification in the Golgi
apparatus prior to granule formation or due to the loss of carbohydrate
residues during the purification of these peptides.
The phosphorylated residues are preferentially located on the
N-terminal (Ser81 and Tyr173) and on the
C-terminal (Ser307, Ser372, and
Ser376) domains of the protein. In contrast, the two
O-glycosylated residues Ser186 and
Thr231 are localized in the central core of the protein. In
1993, two phosphorylated CGA-derived peptides were isolated from
pancreas, pancreastatin (CGA-(248-294)) and CGA-(297-313) (52).
Furthermore, in pancreatic CGA, the N-terminal residue
Ser297 was found to be phosphorylated. As reported here,
adrenal medullary CGA was not phosphorylated on this residue, revealing
that phosphorylation of bovine CGA may be a tissue-specific
process.
Natural Processing of CGA Is Related to Post-translational
Modifications
The two post-translational glycosylations of CGA
probably have a structurally related function. The two trisaccharide
moieties are attached on residues Ser186 and
Thr231, which are present in the central domain of the
protein; this modification may prevent natural cleavage in this domain.
The closest proteolytic sites have been identified on
Arg115-Asp116 and
Arg247-A248 (6). This CGA proteolysis gives
rise to a long glycopeptide of 132 residues containing the two sugar
moieties.
In the C-terminal domain, the phosphorylated residues
Ser307, Ser372, and Ser376 can be
assumed to prevent the natural cleavage on dibasic sites 314-315 and
366-367, since no corresponding peptides have been found (6). However,
cleavage of the unphosphorylated form can generate low amounts of minor
fragments beginning at residue 316.
Location of the O-Glycosylation and Phosphorylation Sites on Bovine
CGA in Relation to Biological Active Peptides
Present results
revealed that two of the post-translational modifications on bovine CGA
are detected on derived peptides that inhibit hormone and
neurotransmitter release: (i) CGA-(1-113) containing phosphorylated
Ser81 corresponds to the vasostatin II sequence (10) and is
homologous to pancreatic rat betagranin (9), and (ii) the natural
fragment CGA-(347-419) bearing phosphorylated Ser372 and
Ser376 is parastatin (18). Previously, both CGA and
pancreastatin were shown to inhibit low Ca2+-stimulated
parathyroid cell secretion (53, 54). The N-terminal fragment, named
betagranin, corresponding to the CGA-(1-113) peptide has been shown to
inhibit parathyroid hormone secretion stimulated by low calcium
concentrations (8). This fragment is generated naturally in several
endocrine tissues, notably the adrenal medulla (10, 12, 55), pituitary
(56), endocrine pancreas (9), and parathyroid glands (8). Another
CGA-derived fragment, named parastatin, located in the C-terminal
domain and corresponding to CGA-(347-419), strongly inhibits low
Ca2+-stimulated parathyroid secretion. Vasostatins, and
more particularly vasostatin I, corresponding to CGA-(1-76) were
described to inhibit the potent vasoconstrictor peptide, endothelin-1.
It is not yet known whether phosphorylation is important for the
biological activity of these CGA-derived fragments.
Concerning the O-glycosylation and phosphorylation
modifications, we have recently reported that they are necessary for
the full antibacterial activity of chromacin peptides. The natural CGA-derived antibacterial peptide, prochromacin CGA-(79-431), included
the seven modifications. We have previously established that the
antibacterial activity of chromacin CGA-(173-186) is correlated with
the presence of O-glycosylation modification on Ser186 and/or phosphorylation on Tyr173
(21).
In addition, the region CGA-(305-309) contains a specific
Ca2+-binding domain including the phosphorylated
Ser307 residue. Again, the presence of phosphate group may
affect the binding of calcium.
Phylogenic Features Related to the Location of O-Glycosylation and
Phosphorylation Sites within Bovine CGA
In Table
I, we report the bovine CGA regions (24) where
post-translationally modified residues are present and compare them
with the corresponding sequences of human (57, 58), pig (59), mouse
(60), and rat (61) species and the N-terminal domain of the ostrich CGA
sequence (62). The three phosphorylated residues Ser307,
Ser372 and Ser376 are strictly conserved and
included in homologous sequences with the typical pattern
(E/Q)(E/Q)EE(R/Q)LS307(R/K/E)EWE(D/N) and
R(P/R)(S/N/G)S372R(E/P)(D/N)S376(V/W)E.
Furthermore, Ser81 is present in bovine, porcine, mouse,
and rat CGA and changed in threonine residue in ostrich CGA sequence,
whereas in the human CGA sequence Ser81 is changed into Gly
on (Q/T)(Q/E)(Q/K)(H/Q/R)(S/R)(S/G/T)81(F/Y/E)(E/D)(D/Q)EL
sequence. However, in the human CGA sequence the adjacent amino acid in
position 80 is a serine residue that could represent the
phosphorylation site. In contrast, the phosphorylated tyrosine residue
Tyr173 is restricted to bovine and human CGAs; the sequence
PS(P/Q)KY173PGPQAK is homologous in both species. In
pig, mouse, and rat, Tyr173 is changed into arginine or
histidine, and no tyrosine residue is present in the immediate
vicinity.
Table I.
Sequence comparison of bovine CGA-derived peptides including
post-translational modifications (CGA-(75-86), CGA-(169-189), CGA-(222-238), CGA-(299-312), CGA-(367-385)) and the corresponding CGA-derived fragments of several species
CGA sequences were retrieved from the Swiss-Prot database: CGAb
(bovine; P05059; Ref. 24), CGAh, (human; P10645; Refs. 57 and 58), CGAp
(pig; P04404; Ref. 59), CGAm (mouse; P26339; Ref. 60), CGAr (rat;
P10354; Ref. 61), CGAo (ostrich; P33716; Ref. 62). Identical residues
and conservative changes in positions corresponding to modified
residues are in boldface type. The consensus O-glycosylated
sequence according to Wilson (36) is underlined.
CGA sequences were retrieved from the Swiss-Prot database: CGAb
(bovine; P05059; Ref. 24), CGAh, (human; P10645; Refs. 57 and 58), CGAp
(pig; P04404; Ref. 59), CGAm (mouse; P26339; Ref. 60), CGAr (rat;
P10354; Ref. 61), CGAo (ostrich; P33716; Ref. 62). Identical residues
and conservative changes in positions corresponding to modified
residues are in boldface type. The consensus O-glycosylated
sequence according to Wilson (36) is underlined.
|
81 173 186
|
| CGAb |
Q Q K K H S S Y E D E L P S P K Y P G P Q A K E D S E G
|
| CGAh |
Q Q K K H S G F E D E L P S Q K Y P G P Q A K G D S E G L S Q G L
|
| CGAp |
Q Q K K Q S S Y E D E L P S K K R P G A Q A E E D H E G
|
| CGAm |
Q E Q Q H S S F E D E L P S Q E H V D P Q A T G D S E R G L S A Q Q
|
| CGAr |
Q Q Q Q H S S F E D E L P S Q E H G I P Q T T E G S E R G P S A Q Q
|
| CGAo |
T Q Q Q R R T E D Q E L
|
|
231 307
|
| CGAb |
A V P E E E S P P T A A F K P P P E P E Q E E Q L S K E W E D
|
| CGAh |
A V P E E E G P T V V L N P H P L E Q E E E R L S K E W E D
|
| CGAp |
A V P E E E G P R S E A F D S H P A Q E E E E R L S E E W E N
|
| CGAm |
A G P E E V P T A A S S S H F E E E E E E R L S R E W E D
|
| CGAr |
A G P K E V P T A A S S S H F E E E E E E R L S R E W E D
|
|
372 376
|
| CGAb |
G W R P N S R E D S V E A G L P L Q V
|
| CGAh |
Q L R R G S R P N S W E D S L E A G L
|
| CGAp |
G W R P S S R E D S V E A G L P L Q V
|
| CGAm |
G W R P S S R E D S V E A R S D F E E
|
| CGAr |
G W R P S S R E D S V E A R G D F E E |
|
The attachment O-glycosylation site Ser186 is
highly conserved in bovine, human, porcine, mouse, and rat CGAs, but
the Wilson consensus pattern PS186QGP is conservative in
bovine and pig CGAs, whereas important variation is present in human,
mouse, and rat protein. Concerning the second O-glycosylated
site, the residue Thr231 is present in bovine, human,
mouse, and rat CGAs. In pig, this threonine is changed into a serine
residue, which might be a phosphorylation site. With regard to the
Wilson consensus sequence (36), the importance of proline residues in
the vicinity of Thr231 is not known. They are present
upstream and downstream in the bovine, human, and pig sequences but are
scarce in rat and mouse CGAs.
Location of O-Glycosylation and Phosphorylation Sites of Bovine CGA
in Relation to Antigenic Sites of Human CGA
Recently, the most
antigenic sites of recombinant human CGA have been characterized and
have been correlated with the location of the different biological
active fragments derived from human chromogranin (63). Taking into
account the high degree of homology between the bovine and human CGA
proteins, it was of interest to correlate the location of these
antigenic sites with the modified residues. The post-translational
modified residues in positions 81, 231, 307, 372, and 376 appear to be
preferentially located in or near domains with high antigenicity
(68-106, 222-230, 315-330, and 376-394), whereas only two modified
residues in positions 173 and 186 are located in the 163-210 region
described to have low antigenicity. This result indicates that
post-translational modifications are located outside of highly
antigenic domains, thus suggesting important, potential biological
roles for the O-linked-trisaccharide and phosphorylated
residues.
FOOTNOTES
*
This work was supported by the French Direction des
Recherches, Etudes et Techniques (DRET 93-104), the Université
Louis-Pasteur of Strasbourg (Contrat Quadriennal 92-95 to INSERM Unit
U.338) and the Institut National de la Santé et de la Recherche
Médicale (Equipements Lourds to INSERM U.338).The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
¶
To whom correspondence should be addressed: Dr.
Marie-Hélène Metz-Boutigue, Unité INSERM U-338, 5 rue
Blaise Pascal, 67084 Strasbourg Cedex, France. Tel.: 33-3-88-45-67-19;
Fax: 33-3-8860-08-06.
1
The abbreviations used are: CGA, chromogranin A;
ES/MS, electrospray mass spectrometry; LC/MS, liquid
chromatography/mass spectrometry; MALDI-TOF, matrix-assisted laser
desorption ionization time-of-flight; HPLC, high pressure liquid
chromatography.
ACKNOWLEDGEMENTS
We express our sincere gratitude to Dr N. Grant for improvement of the manuscript.
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