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Volume 272, Number 34,
Issue of August 22, 1997
pp. 21373-21380
©1997 by The American Society for Biochemistry and Molecular Biology, Inc.
Mechanism of Homophilic Binding Mediated by Ninjurin, a Novel
Widely Expressed Adhesion Molecule*
(Received for publication, November 11, 1996, and in revised form, May 22, 1997)
Toshiyuki
Araki
§,
Drazen B.
Zimonjic
¶,
Nicholas
C.
Popescu
¶ and
Jeffrey
Milbrandt

From the Division of Laboratory Medicine, Department
of Pathology and Medicine, Washington University Medical School,
St. Louis, Missouri 63110 and the ¶ Molecular Cytogenetic
Section, Laboratory of Experimental Carcinogenesis, NCI, National
Institutes of Health, Bethesda, Maryland 20892
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
REFERENCES
ABSTRACT
Ninjurin is a novel protein that is up-regulated
after nerve injury both in dorsal root ganglion (DRG) neurons and in
Schwann cells. We previously reported that ninjurin demonstrates
properties of a homophilic adhesion molecule and promotes neurite
outgrowth from primary cultured DRG neurons. We have now found that
ninjurin is widely expressed in both adult and embryonic tissues,
primarily in those of epithelial origin. Aggregation assays were
used to demonstrate that ninjurin-mediated adhesion requires
divalent cations and is an energy-dependent process. The critical
domain for ninjurin-mediated homophilic adhesion was localized to an 11-residue region (between Pro26 and
Asn37) by mutagenesis and by employing synthetic
oligopeptides as competitive inhibitors of ninjurin-mediated adhesion.
Of particular importance are the Trp residue at position 29 and the 3 arginines in the region. Furthermore, we show that the peptide which
inhibits aggregation of Jurkat cells expressing ninjurin is also
capable of blocking the ability of ninjurin to promote neurite
extension from DRG neurons. Using FISH analysis, the ninjurin gene was
localized to human chromosome 9q22. Several genetic diseases of
unknown etiology have been mapped to this region, including hereditary sensory neuropathy type 1, self-healing squamous epithelioma, split-hand/foot deformity type 1, and familial dilated
cardiomyopathy.
INTRODUCTION
Cell surface adhesion proteins play an important role in embryonic
development, in organogenesis, and in tissue regeneration after injury
(1-3). In the nervous system, adhesion molecules function as receptors
for axonal guidance cues and are important for the development of
neuronal connections (4). In the immune system, cell surface molecules
mediate signaling mechanisms that are critical for specificity in
lymphocyte homing (5). In addition, normal cell-cell interactions are
often aberrant in tumors, and there is increasing evidence that
impaired cellular interaction due to loss of adhesion proteins plays a
role in tumorigenesis, as well as tumor invasion and metastasis (6, 7).
Indeed, a gene encoding an adhesion molecule similar to neural cell
adhesion molecule (NCAM) and N-cadherin has been identified as a tumor suppressor gene (8, 9).
In vertebrates, a number of cell surface glycoproteins have been
identified as adhesion molecules, including integrins, cadherins, and
those containing an immunoglobulin
(Ig)1-like motif (3, 10, 11).
The sequence motifs that mediate the adhesive interactions of these
molecules have been identified for only a few of these proteins. One of
the most well characterized sequence motifs of this type is the
tripeptide Arg-Gly-Asp (RGD), which was identified as the sequence
within fibronectin that mediates cell attachment (12). Many integrins
recognize this RGD motif within their respective binding partners, and
these interactions then mediate either cell-substratum or cell-cell
interactions. Members of the cadherin family contain multiple copies of
the Asp-Arg-Glu (DRE) and Asp-Xaa-Asn-Asp-Asn (DXNDN)
sequences (13). Structural analysis of cadherin indicates that these
motifs may be situated such that they can form a zipper-like structure
that may be critical for cell adhesion (3). Shared sequence motifs for
members of the Ig-superfamily of adhesion molecules are less well
understood although it has been proposed that a decapeptide sequence
(KYSFNYDGSE) in the third Ig-like domain of NCAM is responsible for its
homophilic binding interactions (14).
We have identified a cell membrane-associated protein, ninjurin, that
possesses homophilic adhesion properties but has no significant
homology with other proteins (15). Ninjurin is widely expressed in
embryonic and adult rats, predominantly in epithelial cells. To define
the mechanism of ninjurin-mediated adhesion, we focused on identifying
sequences necessary for the binding interaction. Using a cell
aggregation inhibition assay and synthetic peptides corresponding to
the predicted ninjurin extracellular domain, we localized the binding
region to residues 26 through 37. Based on these results, we tested
ninjurin molecules with mutations in this region for their adhesive
properties and showed that these ninjurin mutants were incapable of
mediating cell aggregation. Furthermore, to demonstrate that
ninjurin function is associated with its adhesive properties, we
demonstrate that ninjurin-stimulated neurite outgrowth from dorsal root
ganglia neurons is reversed by administration of peptides that block
ninjurin-mediated cell aggregation.
EXPERIMENTAL PROCEDURES
Analysis of Ninjurin mRNA and Protein Expression
Patterns
Total RNA was prepared from adult rat tissues and
samples (10 µg) were electrophoresed on 1% agarose-formaldehyde gels
and blotted onto nylon membranes as described previously (16).
Membranes were probed with a 32P-labeled fragment of
ninjurin cDNA. For in situ hybridization analysis of
embryos, timed pregnant rats of the indicated gestational age were
sacrificed, and the embryos were immediately frozen. In situ
hybridization was performed using 33P-labeled antisense or
sense RNA probes transcribed from the ninjurin cDNA (nt 518-1026)
on fresh frozen tissue samples as described previously (17). For
immunohistochemical analysis of adult rat tissues, male Sprague-Dawley
rats (200-300 g) were anesthetized and perfused with 4%
paraformaldehyde in phosphate-buffered saline (PBS). The analysis was
performed on 15 µm cryostat sections using standard methods. The
purified anti-ninjurin antiserum was used at a 1:2500 dilution, and
specific staining was detected with indocarbocyanine (Cy3)-conjugated
anti-rabbit IgG (Jackson Immunological Laboratories). All the tissue
samples were stored at 70 °C. For immunofluorescent staining of
live cultured cells, Chinese hamster ovary (CHO) cells expressing
ninjurin were washed 3 times with PBS containing 0.5% Triton X-100.
The cells were then incubated with a mixture of rabbit anti-ninjurin
antiserum and a mouse anti- -actin monoclonal antibody (1:500
dilution, Sigma) for 30 min at 4 °C and then fixed with 4%
paraformaldehyde in PBS. Immunoreactivity was visualized with
either Cy3-conjugated anti-rabbit IgG (ninjurin) or
fluorescein-conjugated anti-mouse IgG ( -actin). Immunoblotting using
the anti-ninjurin antibodies was performed as described previously
(18).
FISH Localization
A ninjurin genomic probe was labeled with
digoxigenin (Random Primed DNA Labeling Kit, Boehringer-Mannheim). The
labeled probe was used for in situ hybridization of human
chromosomes derived from methotrexate-synchronized normal
peripheral lymphocyte cultures. The conditions of hybridization, the
detection of hybridization signals, digital-image acquisition,
processing and analysis as well as the procedure for direct
visualization of fluorescent signals to banded chromosomes were
performed as described previously (19, 20).
Peptide Preparation
Peptides were synthesized using an
Applied Biosystems peptide synthesizer. Lyophilized crude peptides were
purified by reverse phase-high performance liquid chromatography using
an elution gradient of 0-60% acetonitrile with 0.1% trifluoroacetic
acid in water. The purity and composition of the purified peptides were
verified by mass spectrometry. Purified peptides were dissolved in
distilled water and stored at 70 °C.
Plasmids and Mutagenesis
The ninjurin expression vector
(pCMV-ninjurin) has been previously described (15). Expression vectors
containing ninjurin mutants pCMV-ninjurin(W29A), which replaces the Trp
with Ala at position 29, and pCMV-ninjurin(R32,34N), which replaces the
Args at positions 32 and 34 with Asn, were prepared by introducing the
indicated mutations into synthetic oligonucleotides
(5 -GCTCTCCGCGGCGCTCTTCTTGTTGGCGTAATGGTTTACATTGATGGGCCGGTTCCTCAAACCCGCGCGGGGTGG for W29A and 5 -GCTCTCCGCGGCGCTCTTCTTG
TTGGCGTAATGGTTTACATTGATGGGGTTGTTGTTCAAACCCCAGCGGGGTGG for R32,34N).
PCR reactions using the pCMV-ninjurin plasmid as template were
performed in which the mutagenic primer was paired with a primer
corresponding to nt 840-860 of the pCMV vector. The amplified products
were digested with BglII and SacII, and the
fragments containing the mutations were ligated into pCMV-ninjurin digested with BglII and SacII so as to replace
the corresponding wild-type fragment and create pCMV-ninjurin(W29A) and
pCMV-ninjurin(R32,34N).
Cell Culture and Transfection
CHO and Jurkat cells were
grown as described previously (15). The expression vectors
pCMV-ninjurin, pCMV-ninjurin(W29A) and pCMV-ninjurin(R32,34N) were
transfected into CHO cells via calcium phosphate precipitation or into
Jurkat cells via electroporation. Stable transfectants were selected by
growing in medium containing G418 (0.4 mg/ml).
Primary cultures of neurons from dorsal root ganglia (DRG) were
prepared from E17 rat embryos and dissociated neurons were grown on
confluent monolayers of either native CHO cells or CHO cells expressing
ninjurin in 24-well plates. Cultures were grown in a medium that
consisted of 90% Eagle's minimal essential medium (Life Technologies,
Inc.), 10% FCS, 20 µg/ml each fluorodeoxyuridine and uridine, and 50 ng/ml mouse nerve growth factor (gift from E. Johnson, Washington
University). Synthetic peptides were added at a concentration of 0.16 mM to wells where indicated. Six h after plating, the cells
were fixed in 4% paraformaldehyde in PBS and immunohistochemistry was
performed using anti-neurofilament H antibody. The length of the
neurites extended by the DRG neurons was measured as described
previously (21).
Cell Aggregation Assays
Aggregation assays were performed
in 96-well microtiter plates as described previously (22) using Jurkat
cells stably transfected with ninjurin expression vectors (either wild
type or mutant). Results of the assays were quantitated after 1 h
unless otherwise indicated. Reagents and peptides were added to the
cell suspension prior to performing the assays at the indicated
concentrations. The requirement for divalent cations was tested in
Hank's balanced salt solution without calcium and magnesium containing
10% dialyzed fetal bovine serum. Cell quantitation was performed as
described previously (22). Briefly, photographs of the cells were taken at the indicated time points, and the total number of cells as well as
the number of cells incorporated into aggregates were counted and a
ratio was determined. At least 4 assays were performed for each set of
experimental conditions. Statistical analysis was performed by
SigmaPlot (version 3.0).
For aggregation experiments performed using a mixture of cells, cells
expressing wild-type ninjurin were stained red with 1 mM
CMTMR, and cells expressing mutant ninjurin were stained green with 1 mM CMFTA as described in the manufacturer protocol (Molecular Probes). The cells were resuspended to 1 × 106 cells/ml, and 3 ml of the mixed cell suspension was
allowed to form aggregates in 6-well culture plates. The composition of
the aggregates was monitored by fluorescence microscopy.
RESULTS
Ninjurin Is Expressed in a Variety of Tissues during Embryogenesis
and Adulthood
In previous work, we showed that ninjurin is
expressed in the nervous system, particularly after nerve injury (15).
To further examine the expression pattern of ninjurin in the adult rat,
we performed RNA blot analysis on samples isolated from a variety of
tissues. The highest levels of ninjurin mRNA were found in the
liver. In addition, thymus, heart, adrenal gland and spleen also had
significant levels of ninjurin transcripts, whereas brain and DRG had
low levels of expression (Fig. 1). To
examine ninjurin expression during development, in situ
hybridization was performed on rat embryos sacrificed at embryonic days
17 and 19. Ninjurin expression is observed in a variety of embryonic
tissues, with the most abundant expression observed in tissues where it
is highly expressed in the adult (e.g. liver, adrenals, and
spleen) (Fig. 1). Ninjurin was also detected in the vertebra and limbs,
where its expression increased with increasing embryonic age. The
signal was detected primarily in regions of active ossification, such as the terminal areas of the limb and vertebral bones. The most intense
signal was observed over layers of dividing chondrocytes, rather than
over regions that were already ossified. Ninjurin was also highly
expressed in the skin, where it was primarily detected in the
epithelium. In the central nervous system, ninjurin expression was very
low throughout the embryonic period examined. Tissues hybridized with a
ninjurin sense probe or tissues treated with ribonuclease prior to
hybridization showed no appreciable signal (data not shown).
Fig. 1.
Ninjurin RNA analysis in adult and embryonic
rat tissues. Top panel, samples of total RNA (10 µg) from
liver (lane 1), heart (lane 2), lung (lane
3), gut (lane 4), thymus (lane 5), spleen
(lane 6), adrenal (lane 7), DRG (lane
8), and brain (lane 9) were electrophoresed, blotted,
and hybridized with 32P-labeled ninjurin cDNA probe.
The ethidium bromide staining of 28S ribosomal RNA is shown to
demonstrate the quantity of RNA loaded. Bottom panel,
sagittal sections of E17 (a) and E19 (b) rat
embryos were hybridized with 33P-labeled ninjurin RNA
probe. Note the intense expression of ninjurin mRNA at E17 in the
liver (L), growing limb (arrows), and costal bones (arrowheads) and at E19 in the liver (L),
adrenal (A), spleen (S), vertebrae
(arrowheads) and skin (arrows). Ninjurin mRNA
is not detected in the brain at either E17 or E19. Scale
bars = 5 mm.
[View Larger Version of this Image (97K GIF file)]
Ninjurin Is Expressed Predominantly in Epithelial Cells
To
further characterize the ninjurin protein, we prepared a polyclonal
antiserum against a peptide derived from the N terminus (amino acids
1-15). Anti-ninjurin antibodies were then purified by immunoaffinity
chromatography. These antibodies recognized a 22-kDa protein that was
present in rat liver and in CHO cells stably transfected with a
ninjurin expression vector, but not in native CHO cells (Fig.
2).
Fig. 2.
Protein blot analysis of ninjurin.
Proteins from lysates prepared from native CHO cells (lane
1), CHO cells stably transfected with a CMV-ninjurin expression
construct (lanes 2 and 3) or adult rat liver
(lane 4) were electrophoresed on 12% SDS-polyacrylamide
gels, transferred to nitrocellulose, and incubated with affinity
purified anti-ninjurin rabbit antibodies. Ninjurin (denoted by
arrowhead) was visualized using enhanced chemiluminescence. In lane 2, the antiserum was preadsorbed with an excess
amount of the peptide used as the immunogen to demonstrate the
specificity of the antibodies.
[View Larger Version of this Image (45K GIF file)]
After verifying their specificity for ninjurin, these antibodies were
used to examine cell type-specific ninjurin expression via
immunohistochemistry. This analysis confirmed that ninjurin is
expressed in a wide variety of tissues in the adult rat, including the
liver, kidney, thymus, uterus, adrenal gland, retina, and dorsal root
ganglia (Fig. 3). In the dorsal root
ganglia, ninjurin was not detected in neurons but rather was expressed
in the satellite cells that ensheath the neuronal cell bodies. In the
adrenal gland, ninjurin is expressed throughout the cortex and appears
to be on the surface of the cortical cells. Ninjurin immunoreactivity was also observed on the surface of the hepatocytes of the liver. In
the kidney, ninjurin was detected in the podocytes and/or mesangial cells of the glomerulus, but other renal cell types were negative. In
the thymus, scattered cells stained intensely. These
ninjurin-expressing cells could represent a specific subset of
thymocytes or the thymic epithelial cells, which provide the proper
microenvironment for lymphocyte maturation. Flat cells located on the
surface of the thymic cortex and in the area adjacent to the blood
vessels also expressed ninjurin. Staining for ninjurin was also
observed in the uterus, where ninjurin-positive cells were found in the
myometrium. These cells were distinct from smooth muscle cells, and
their distribution and morphology was consistent with fibroblasts of the associated connective tissues. In the retina, ninjurin was detected
in the Muller cells near the apical ends, which project into the
interphotoreceptor matrix. The brush-like staining pattern strongly
indicates that the intense immunoreactivity is restricted to the apical
microvilli of the Muller cells. Taken together, these results
demonstrate that ninjurin immunoreactive cells are found in a wide
variety of tissues.
Fig. 3.
Localization of ninjurin by
immunohistochemistry. Affinity purified anti-ninjurin antibodies
were used to detect ninjurin in a variety of adult rat tissues by
immunohistochemistry: DRG (a), kidney (b),
adrenal gland (c), thymus (d), uterus
(e), liver (f); and retina (g). Note
that arrows in panel b denote a glomerulus, and
in panel d, they denote blood vessels on the cortical
surface of the thymus. In panel f, v denotes the
central vein of the liver. Scale bars in panels a, c,
e, and f = 100 µm; in panel b,
scale bar = 50 µm; and in panel d,
scale bar = 200 µm.
[View Larger Version of this Image (118K GIF file)]
The pattern of staining we observed suggests that ninjurin is
associated with the cell surface, consistent with its role in mediating
cell adhesion and with the cell surface labeling experiments previously
reported (15). To provide further confirmation of its surface
localization, immunostaining of live cells was performed. CHO cells
stably expressing ninjurin were incubated with anti-ninjurin antibodies
at 4 °C prior to fixation, conditions during which antibodies are
excluded from penetrating the cell. The ninjurin immunoreactivity was
intense and appeared to be restricted to the cell surface (Fig.
4). When antibodies to the intracellular protein -actin were used to stain the cell under similar conditions, no immunoreactivity was observed. These results confirm that the antibodies were unable to enter the cell under these staining conditions and clearly indicate that the N-terminal region of the
ninjurin molecule (to which the antibodies were raised) is located
extracellularly.
Fig. 4.
Immunostaining of live cells demonstrates
ninjurin is located extracellularly. CHO cells expressing ninjurin
were incubated with a mixture of rabbit anti-ninjurin and mouse
anti- -actin antibodies under conditions that preclude panels
a and b or allow panels c and d
antibodies access to the interior of the cell. Ninjurin was visualized
(a, c) using Cy3-conjugated anti-rabbit IgG, and
-actin was visualized (b, d) using fluorescein
isothiocyanate-conjugated anti-mouse IgG.
[View Larger Version of this Image (115K GIF file)]
Chromosomal Localization of the Human Ninjurin Gene
To obtain
further clues regarding the function of ninjurin and its possible
association with human disease, the chromosomal localization of the
human ninjurin gene was determined. In two experiments with lymphocytes
from different individuals, 80% of the chromosome spreads had specific
fluorescent signals at identical sites on both chromatids of the long
arm of chromosome 9. From a total of 190 metaphases examined, 175 had
fluorescent signals on both chromosomes 9 (Fig.
5A). The location of the
fluorescent signal was determined directly in 50 metaphases with
4 ,6-diamidino-2-phenylindole-enhanced G-like banding at region
9q.22.1-q22.3 where we assign the locus of the ninjurin gene (Fig.
5B). Several diseases of unknown pathogenesis have been
linked to this region, including hereditary sensory neuropathy type 1 (23), self-healing squamous epithelioma (24), split-hand/foot deformity
type 1 (25), and familial dilated cardiomyopathy (26).
Fig. 5.
FISH localization of the ninjurin gene to
human chromosomes. A, digital image of a metaphase
chromosome spread derived from methotrexat- synchronized normal human
peripheral leukocytes after hybridization with a digoxigenin-labeled
ninjurin genomic fragment probe. Two chromosomes have symmetrical
signals on sister chromatids. B, the digital image of the
4 , 6-diamidino-2-phenylindole-counterstained chromosomes of the same
metaphase spread that was contrast-enhanced and look-up-table-inverted
to obtain G-like bands. The banding resolution of individual
chromosomes permits direct localization of the hybridization signal to
band 9q22.1-q22.3, the assigned location of the human ninjurin gene. To
confirm the identity of chromosomes, preparations were rehybridized
with chromosome-specific painting probes (33), and previously observed
labeled metaphases were re-recorded.
[View Larger Version of this Image (68K GIF file)]
Properties of Ninjurin-mediated Adhesion
We had previously
used a cell aggregation assay to demonstrate that Jurkat T-cell
leukemia cells expressing ninjurin showed increased adhesiveness
compared with native Jurkat cells (15). Additional studies demonstrated
that ninjurin adhesion was mediated via homophilic interactions.
Inspection of the ninjurin sequence did not reveal any motifs present
in other adhesion molecules that might mediate homophilic adhesion. To
characterize the adhesive properties of ninjurin, cell aggregation
assays using ninjurin-expressing Jurkat cells were performed under
various conditions (Fig. 6). Ninjurin-mediated adhesion was completely inhibited by prior addition of 20 µM cytochalasin B which depolymerizes actin
filaments, as well as by 0.02% sodium azide, an inhibitor of oxidative
phosphorylation. Aggregation was also inhibited when the assays were
conducted at 4 °C. These results demonstrate that ninjurin-mediated
adhesion requires a functional cytoskeleton and is an active,
energy-dependent process. We also examined the pH and
divalent cation requirements of the interaction. Minimal aggregation of
ninjurin-expressing Jurkat cells was observed when assays were
performed in Ca2+- and Mg2+-free medium, or in
normal medium containing greater than 5 mM EDTA.
Aggregation could be restored by the addition of either CaCl2 or MgCl2, indicating that
ninjurin-mediated adhesion requires divalent cations.
Ninjurin-expressing Jurkat cells showed the same degree of aggregation
between pH 7 and 11, whereas aggregation was inhibited at a pH less
than 6.
Fig. 6.
Characterization of ninjurin-mediated
adhesion. A, aggregation assays using ninjurin-expressing
Jurkat cells were performed in RPMI 1640 with 10% fetal calf serum
(FCS) containing 20 µM cytochalasin B, 0.02% sodium
azide, or the indicated concentration of EDTA. Assays were also
conducted at 4 °C. Assays were also conducted in Hanks' balanced
salt solution with 10% dialyzed FCS containing the indicated divalent
cation. B, assays were conducted in RPMI 1640 with 10% FCS
at the indicated pH. Aggregation assays were performed in flat bottomed
96-well microtiter plates. In each assay, 100 µl of cell suspension
at 2 × 106 cells/ml was added per well, and the ratio
of the number of cells in the aggregates to the total number of cells
was determined after 1 h. Data represent the mean ± S.D. of
four independent experiments
[View Larger Version of this Image (17K GIF file)]
Characterization of Ninjurin Adhesion Domain
Analysis of the
ninjurin sequence predicted that it contains two transmembrane domains
(between residues 72 and 100 and between 118 and 139) (15). This
analysis further suggested that the amino terminus of the molecule is
likely to be located extracellularly. To directly investigate the
hypotheses that the N-terminal hydrophilic region is located
extracellularly and is responsible for homophilic adhesion, we tested
whether peptides from this region could inhibit ninjurin-mediated
aggregation (27) (Fig. 7). Partially
overlapping synthetic peptides whose sequences are derived from the
predicted ninjurin extracellular domain were tested for their ability
to inhibit ninjurin-mediated adhesion (Fig.
8A). Peptides 1 and 2 inhibited aggregation in a dose-dependent manner.
Aggregation was completely abolished by peptide 2 at concentrations
above 0.33 mM, whereas peptide 1 inhibited aggregation less
efficiently. Peptide 4 had no effect on aggregation, and we were
unable to test peptide 3 due to its very poor solubility. These results indicated that the ninjurin N terminus was indeed located
extracellularly, and that residues corresponding to peptide 2 were
critical for binding.
Fig. 7.
List of synthetic peptides used in
competition experiments. The N-terminal 100 amino acids of rat
ninjurin are shown, with the residues critical for adhesion indicated
in bold. The names and sequences of the peptides are
indicated, with the mutated residues denoted by underlined bold
characters.
[View Larger Version of this Image (16K GIF file)]
Fig. 8.
Identification of residues responsible for
ninjurin-mediated adhesion. A, aggregation assays using
ninjurin-expressing Jurkat cells were performed in the presence of each
of the indicated peptides. The number of cells incorporated into
aggregates was determined after 1 h, and the ratio of cells in
aggregates to total cells was calculated and plotted versus
peptide concentration. Data represent the mean ± S.D. of four
independent experiments. B, aggregation assays were
performed as above with each of the mutated peptides (M1-M7) listed in
Fig. 7. Each peptide was tested at concentrations ranging from 0.02 to
1.6 mM, and the aggregation ratio was plotted as above.
Results using G30A and L31N were not statistically different from those
obtained using the native peptide (P6). Results using R32N were
identical to those obtained with R34N and R28N. All the data represent
the mean ± S.D. of four independent assays.
[View Larger Version of this Image (16K GIF file)]
To further delimit the site of interaction, we tested four additional
peptides (peptides P5-P8; Fig. 7) for their ability to inhibit
ninjurin-mediated aggregation. These results demonstrated that a
peptide (P6), corresponding to ninjurin residues 26-37, showed
inhibitory activity comparable with peptide 2 (Fig. 8B, data
not shown for P5, P7, and P8). Aggregation was inhibited at P6
concentrations greater than 0.02 mM and was completely
abolished at concentrations above 0.4 mM. To identify the
amino acids most critical for ninjurin-mediated adhesion, we
synthesized a series of peptides (M1-M7) extending from residue 26 to
37, each containing a single amino acid mutation (Fig. 7). The ability
of each of these peptides to inhibit ninjurin-mediated adhesion in a
dose-dependent manner was examined (Fig. 8B). We
found that mutation of the Trp or any of the Arg residues resulted in a
loss of the ability to inhibit aggregation, implying that these 4 residues play an important role in ninjurin-ninjurin
interactions. Mutations made to the non-charged residues including
Gly30 and Leu31 did not alter the ability to
inhibit aggregation, indicating that these residues are not critical to
the interaction. One of the mutations (Asn33 to Leu)
resulted in a peptide with greater inhibitory activity than wild
type, suggesting that it interacts with ninjurin very strongly.
Ninjurin Mutants Fail to Support Aggregation
Aggregation
inhibition experiments using synthetic peptides revealed that residues
26-37 (the ninjurin adhesion motif) are responsible for
ninjurin-mediated homophilic cellular adhesion. To confirm the
importance of this motif, two Jurkat cell lines expressing ninjurin
mutants were generated. One was designed to express ninjurin(W29A), in
which Trp29 was mutated to Ala; and the other expressed
ninjurin(R32,34N), in which Arg32 and Arg34
were both mutated to Asn. Protein blot and immunohistochemical analyses
of these cell lines confirmed that the expression levels for wild
type and mutant ninjurin molecules were comparable and that the
ninjurin mutants were expressed on the cell surface (Fig. 9). Aggregation assays with these
ninjurin transfected cell lines revealed that Jurkat cells stably
expressing ninjurin(W29A) showed no increase in aggregation over native
Jurkat cells, whereas cells expressing ninjurin(R32,34N)
showed greater aggregation than native Jurkat cells but significantly
less than Jurkat cells expressing wild-type ninjurin (Fig.
10), a result consistent with that of the peptide competition assay. To determine whether the mutated ninjurin molecules could interact with wild-type ninjurin, we performed
aggregation assays on mixtures of wild type and mutant ninjurin
molecules, which were differentially stained by fluorescent dyes. When
equal numbers of cells expressing wild-type ninjurin (colored
red) and ninjurin(W29A) (colored green) were
mixed together, aggregates contained predominantly wild-type
ninjurin-expressing cells. Aggregates containing both types of cells
were not observed, indicating that the mutant molecules are incapable
of interacting with wild-type ninjurin. A similar experiment conducted
with cells expressing wild-type ninjurin (colored red) and
ninjurin(R32,34N) (colored green) resulted in an increased
number of aggregates. Some of the aggregates showed a mosaic pattern,
indicating that this ninjurin mutant could interact with wild-type
ninjurin. Taken together, these results are consistent with those
obtained using the peptide competition assays and indicate that
residues 26 to 37 are critical for ninjurin-mediated adhesion.
Fig. 9.
Wild-type and mutant ninjurin molecules are
expressed on the cell surface at comparable levels. A,
immunoblot analysis of native and mutant ninjurin protein expression in
stably transfected Jurkat cells. Lysates of Jurkat cells expressing
wild-type ninjurin (lane 1), ninjurin(W29A) (lane
2), ninjurin(R32,34N) (lane 3), and native Jurkat cells
(lane 4) were electrophoresed on a 12% SDS-polyacrylamide
gel. The proteins were transferred to nitrocellulose and incubated with
affinity purified anti-ninjurin antibodies. Ninjurin (denoted by
arrow) was visualized by enhanced chemiluminescence. B, immunohistochemical analysis of wild type and mutant
ninjurin protein expression in stably transfected Jurkat cells.
Affinity-purified anti-ninjurin antiserum was used to detect ninjurin
in Jurkat cells expressing wild-type ninjurin (a);
ninjurin(W29A) (b); ninjurin(R32,34N) (c); and
wild type Jurkat cells (d). Cell preparations were made using Cytospin.
[View Larger Version of this Image (124K GIF file)]
Fig. 10.
Aggregation assays using Jurkat cells
expressing either wild type or mutant ninjurin molecules. A)
Jurkat cells stably transfected with wild-type ninjurin,
ninjurin(W29A), and ninjurin(R32,R34N), either alone or
mixed in a 1:1 ratio with cells expressing wild-type ninjurin, were used to perform aggregation assays. The ratio of cells
in aggregates to total cells was determined after 1 h. The data
represent the mean ± S.D. of four independent experiments. B, aggregation assays were performed with 1:1 mixtures of
cells expressing wild-type ninjurin (stained with red
fluorescent dye) and those expressing ninjurin(W29A) (stained with
green fluorescent dye). The same field was exposed three
times to show the distribution of wild-type ninjurin-transfected cells
only (a), ninjurin(W29A) transfected cells only
(b), and both kinds of cells (double exposure in
c). Note that the green cells do not aggregate to
themselves or form clusters with cells expressing wild-type ninjurin.
C, aggregation assays were performed with a 1:1 mixture of
cells expressing wild-type ninjurin (stained with red
fluorescent dye) and those expressing ninjurin(R32,34N) (stained
with green fluorescent dye). The same field was exposed
three times as in panel B. Note that green cells
are present in clusters with red cells, resulting in a
yellow color in the double exposure.
[View Larger Version of this Image (93K GIF file)]
Ninjurin-stimulated Neurite Outgrowth Is Mediated through the
Adhesion Motif
Using ninjurin-expressing CHO cells, we have
previously shown that ninjurin promotes the extension of neurites from
primary cultured DRG neurons. To determine whether this phenomenon
occurs via adhesive properties of ninjurin, we tested the ability of peptides that blocked ninjurin aggregation to inhibit neurite outgrowth. DRG neurons from E17 rat embryos were dissociated and seeded
onto confluent monolayers of either native or ninjurin-expressing CHO
cells. The neuronal cultures were treated with either P6 (wild type) or
M2 (W29A) peptide at a concentration of 0.16 mM, and neurite extension was monitored (Fig.
11). As previously documented, neurites
from neurons grown on CHO cells expressing ninjurin showed increased
neurite outgrowth (569 ± 134 µm) compared with those grown on
native CHO cells (297 ± 104 µm) (15). However, the promotion of
neurite outgrowth by ninjurin was inhibited (317 ± 83 µm) when
the cultures were treated with the peptide of native sequence (P6),
whereas the peptide (M2) containing the W29A mutation had no
significant inhibitory effect on neurite extension by DRG neurons
(638 ± 209 µm) (Fig. 11). Neither of the peptides affected the
neurite extension when neurons were cultured on native CHO cells (data
not shown). These results indicate that the residues identified as
important for adhesion using the Jurkat cell aggregation assay are also
required for ninjurin-stimulated neurite outgrowth, suggesting that the
adhesive properties of ninjurin play an important functional role in
this process.
Fig. 11.
Axonal growth promoted by ninjurin is
reversed by a peptide that inhibits aggregation. DRG neurons from
E17 rat embryos were seeded onto monolayers of native CHO cells
(A) or CHO cells expressing ninjurin (B-D).
Cultures were maintained with peptide P6, in panel C, or M2,
which contains the W29A mutation (D). Six h later, the cells
were fixed and neurites were visualized by immunohistochemistry with
anti-neurofilament H antibodies. Scale bar = 200 µm.
Neurite length shown in panel E was quantitated by measuring
neurites from approximately 50 neurons grown under each condition. The
data represent the mean ± S.D. of three independent experiments.
[View Larger Version of this Image (75K GIF file)]
DISCUSSION
Ninjurin was first identified as a molecule that is up-regulated
in Schwann cells and neurons after peripheral nerve injury. Subsequent
analysis of ninjurin function revealed that it is a cell surface
molecule that promotes cell aggregation and stimulates neurite
outgrowth, suggesting that it may play an important role in nerve
regeneration (15). The mechanism by which ninjurin promotes aggregation
has been unclear, since it does not contain sequence motifs found in
other adhesion molecules. Mutation analysis has enabled us to identify
a region in ninjurin that functions as a homophilic adhesion motif that
bears no resemblance to previously identified adhesion motifs. Using
aggregation inhibition assays and synthetic peptides containing mutated
residues within this region, we found that a Trp and three Arg residues
within this 10 amino acid region are important for ninjurin-mediated
recognition. To verify the critical role of this adhesion motif in
ninjurin-mediated functions, peptides that inhibited ninjurin-mediated
cell aggregation were used to show that ninjurin-stimulated neurite
outgrowth is dependent on its adhesive properties.
The ninjurin adhesion motif (residues 26-37) contains a tryptophan and
a cluster of arginine residues. None of the previously reported
homophilic adhesion molecules contain this peptide motif or a
combination of tryptophan and arginines as functionally relevant residues (28). Competition experiments with peptides derived from this
region demonstrated that replacement of tryptophan by alanine
dramatically decreased the ability to inhibit aggregation, suggesting
that this tryptophan residue plays a major role in ninjurin-ninjurin
interactions. The importance of the tryptophan residue was also
confirmed by mixed aggregation assays using Jurkat cells expressing
ninjurin(W29A), which demonstrated that these cells do not adhere to
themselves or to cells expressing wild-type ninjurin. This tryptophan
residue may be directly involved in the physical interaction between
ninjurin molecules, or it may be necessary for the overall structure of
the domain. Replacement of the arginines showed significant, but less
dramatic effects on ninjurin adhesion. Interestingly, even though
ninjurin binding is dependent on divalent cations, the ninjurin
adhesion motif does not contain acidic residues commonly associated
with cation binding motifs. Overall, ninjurin contains 13 Glu and Asp
residues, with 6 of these residues located within the
amino-terminal 23 residues. Perhaps this acidic region is related to
the cation dependence of ninjurin and plays a role in the
formation of the functional ninjurin adhesion domain.
The demonstration that the inhibitory peptide we identified via cell
aggregation assays was able to reverse the ninjurin-stimulated neurite
outgrowth from neurons indicates that the biological function of
ninjurin is related to its adhesive properties. We also observed that
the basal adhesion observed for wild-type Jurkat cells was abolished in
the presence of peptides containing the adhesion motif of ninjurin
(data not shown). This suggests that other molecule(s) expressed by
Jurkat cells possibly share this motif. If other molecules with the
ninjurin-like adhesion motif exist, then the possibility that ninjurin
may participate in heterophilic as well as homophilic interactions must
be considered. Clearly, the ability of ninjurin to participate in
heterophilic binding would greatly extend the number of interactions,
and potentially the number of functions, in which ninjurin is
involved.
In addition to its expression by Schwann cells and neurons after nerve
injury (15), we found that ninjurin is present in a wide variety of
tissues (e.g. thymus, kidney, liver, adrenal gland), both
during development and in adulthood. Ninjurin is predominantly
expressed in epithelial cells, suggesting that it is important in the
normal development and/or function of a number of tissues, in addition
to its role in promoting nerve regeneration. For instance, its
presence in the thymus may indicate a role in thymocyte development as
adhesion molecules on thymic epithelial cells are thought to be
important in this process (29). Ninjurin may also be important in the
formation of cellular polarity as it is located in a restricted region
in Muller cells, the highly polarized cells of the retina. Within this
region, ninjurin may be present in a specific intercellular adhesion
apparatus, or it may be interacting with specific cytoskeletal
components.
The mapping of the ninjurin gene to human chromosome 9q22 is intriguing
as several diseases of unknown pathogenesis have been linked to this
region and because mutations in another neural cell adhesion molecule,
L1, have been associated with a number of severe genetic disorders,
including X-linked hydrocephalus, MASA syndrome (Mental retardation,
Aphasia, Shuffling gait, and Adducted thumbs), and spastic paraplegia
type 1 (30, 31). The role of ninjurin in promoting nerve regeneration
and its expression in sensory neurons of the DRG makes it a reasonable
candidate gene for hereditary sensory neuropathy type 1, a disease
characterized by progressive degeneration of DRG and motor neurons
followed by sensory loss, muscle weakness, and neural deafness (23). The linkage to familial dilated cardiomyopathy is also interesting as
there is evidence suggesting that an autoimmune mechanism directed against cell surface adhesion molecules could be involved in this disease (26, 32). The expression pattern of ninjurin, its identification as a new adhesion protein, and its potential linkage to
a number of hereditary disorders suggest that it plays an important role in the proper development and function of a variety of
tissues.
FOOTNOTES
*
This work was supported by National Institutes of Health
Grant CA 53524 and a grant from Ronald McDonald Children's Charities.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
§
Present address: Dept. of Anatomy and Neuroscience, Osaka
University Medical School, 2-2 Yamadaoka, Suita-shi, Osaka 565, Japan.
An Established Investigator of the American Heart Association
and to whom all correspondence should be addressed: Dept. of Pathology,
Box 8118, Washington University Medical School, 660 S. Euclid Ave., St.
Louis, MO 63110. Tel.: 314-362-4651; Fax: 314-362-8756; E-mail:
jeff{at}milbrandt.wustl.edu.
1
The abbreviations used are: Ig, immunoglobulin;
DRG, dorsal root ganglia; NCAM; neural cell adhesion molecule; CMTMR,
5-(and-6)-(((4-chloromethyl)benzoyl)amino)tetramethylrhodamine; CMFTA;
5-chloromethylfluoresceindiacetate; nt, nucleotides; PBS, phosphate-buffered saline; CHO, Chinese hamster ovary; Cy3,
indocarbocyanine; FCS, fetal calf serum.
ACKNOWLEDGEMENTS
We thank members of the Milbrandt laboratory
for comments on the manuscript and Paul Allen for peptide synthesis and
purification.
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